• Title/Summary/Keyword: PCA(Principal Component Analysis

Search Result 1,243, Processing Time 0.04 seconds

Environmental Damages in the Atlantic Forest Biome

  • Brodt, Michele Santa Catarina;Bergmann, Melissa;Broman, Eli Natali;Sanfelice, Gabriela;Ferreira, Juliana Duarte;Lunardi, Larissa;Huller, Alexandre;Carli, Lenice De
    • Journal of Forest and Environmental Science
    • /
    • v.34 no.2
    • /
    • pp.101-107
    • /
    • 2018
  • We identified the main impacts, drivers, and restoration projects for Atlantic Forest in Northwest of the Rio Grande do Sul State, Brazil. The objective was to analyze the quantity, distribution, and causes of the environmental crimes in 2000-2014. To verify differences between degraded and restored areas, we performed a t-test; ANOVA for the municipalities with more quantity of crimes, simple linear regression analysis for the relationship between sizes of degraded areas and quantity of seedlings planted, and Principal Component Analysis (PCA) for environmental damages categories and population of the municipalities. The main environmental damages found were deforestation outside permanent preservation area (20%) and those related to Permanent Preservation Area (37%). Environmental crimes in these areas fall into two categories: native and exotic vegetation removal (17%), and impediment to natural regeneration (20%). The average size of the degraded areas was $5,359{\pm}526m^2$, while for restored areas was $3,337{\pm}255m^2$. The sizes of the degraded fragments were similar among the five municipalities with the higher number of environmental crimes (ANOVA: p>0.05, F=1.24; df=241). The number of seedlings planted was positively related to the sizes of the degraded fragments (p<0.001, $R^2=0.53$). Segregation between the less and the most populous municipalities was found with the PCA analysis along PC1 (51.7%), while PC2 represented 19.2% of the total variation. The most populous municipalities showed the highest number of environmental crimes, and the majority of degraded areas were recovered by planting native seedlings. Atlantic Forest fragments need to be recognized and preserved as an ecosystem with a unique ecological function by the population and public administration.

The Statistical Analysis for the fate of Antibiotic Resistance according to the Spatial and Operational Wastewater Treatment Factors (하수 처리시설의 공간 및 운전인자에 따른 항생제 내성의 통계학적 분석)

  • Kim, Sung-Pyo;Cho, Yun-Chul;Kim, Lee-Hyung;Chandran, Kartik
    • Journal of Wetlands Research
    • /
    • v.13 no.1
    • /
    • pp.117-127
    • /
    • 2011
  • The aim of this study was to examine the fate of tetracycline resistant bacteria (TRB) and tetracycline resistant genes (TRG) according to the spatial and operational wastewater treatment factors. As part of the effort, TRB and TRG of water samples at each unit processes of three different wastewater treatment plants (WWTPs) were analyzed over seven month study periods. With the data about different spatial and operating conditions of these WWTPs, TRB and TRGs, principal component analysis (PCA) was performed to find out any general correlation trend. Based on the statistic analysis results, the extent of TRB concentration in the activated sludge (TRBAS) is much related to the TRB concentration in primary clarifier effluent (TRBPE). Also, the study results indicated that the fate of TRB and TRG are significantly affected by the SRT variations.

Analysis of polyphenolic metabolites from Artemisia gmelinii Weber ex Stechm. and regional comparison in Korea

  • Park, Mi Hyeon;Kim, Doo-Young;Jang, Hyun-Jae;Jo, Yang Hee;Jeong, Jin Tae;Lee, Dae Young;Baek, Nam-In;Ryu, Hyung Won;Oh, Sei-Ryang
    • Journal of Applied Biological Chemistry
    • /
    • v.62 no.4
    • /
    • pp.433-439
    • /
    • 2019
  • Artemisia species are widely used as food ingredients and raw material in traditional medicine. However, to date, the secondary metabolites of Artemisia gmelinii Weber ex Stechm. have not been sufficiently investigated. The secondary metabolites of A. gmelinii, which was collected from representative regions in Chungbuk, Gangwon, and Gyeongbuk, were analyzed using ultra-performance liquid chromatography-quadrupole time-of-flight mass spectrometry (UPLC-QTof MS) combined with an unsupervised principal component analysis (PCA) multivariate analysis. In the loading scatter plot of PCA, significant changes in metabolites were observed between the regions, ten metabolites (3: 5-O-caffeoylquinic acid, 4: 4-O-caffeoylquinic acid, 8: trans-melilotoside, 12: quercetin 3-O-hexoside, 15: 3,4-O-dicaffeoylquinic acid, 17: 3,5-O-dicaffeoylquinic acid, 18: 4,5-O-dicaffeoylquinic acid, 19: syringaldehyde, 20: caffeoylquinic acid derivative, and 23: icariside II) were evaluated as key markers among twenty-five identified metabolites. Interestingly, the contents of the identified marker significantly differed between the three groups. This is the first study to report the presence of marker metabolites and their correlating geographical cultivation in A. gmelinii.

Development of a disaster index for quantifying damages to wastewater treatment systems by natural disasters (하수처리시설의 자연 재해 영향 정량화 지수 개발 연구)

  • Park, Jungsu;Park, Jae-Hyeoung;Choi, June-Seok;Heo, Tae-Young
    • Journal of Korean Society of Water and Wastewater
    • /
    • v.35 no.1
    • /
    • pp.53-61
    • /
    • 2021
  • The quantified analysis of damages to wastewater treatment plants by natural disasters is essential to maintain the stability of wastewater treatment systems. However, studies on the quantified analysis of natural disaster effects on wastewater treatment systems are very rare. In this study, a total disaster index (DI) was developed to quantify the various damages to wastewater treatment systems from natural disasters using two statistical methods (i.e., AHP: analytic hierarchy process and PCA: principal component analysis). Typhoons, heavy rain, and earthquakes are considered as three major natural disasters for the development of the DI. A total of 15 input variables from public open-source data (e.g., statistical yearbook of wastewater treatment system, meteorological data and financial status in local governments) were used for the development of a DI for 199 wastewater treatment plants in Korea. The total DI was calculated from the weighted sum of the disaster indices of the three natural disasters (i.e., TI for typhoon, RI for heavy rain, and EI for earthquake). The three disaster indices of each natural disaster were determined from four components, such as possibility of occurrence and expected damages. The relative weights of the four components to calculate the disaster indices (TI, RI and EI) for each of the three natural disasters were also determined from AHP. PCA was used to determine the relative weights of the input variables to calculate the four components. The relative weights of TI, RI and EI to calculate total DI were determined as 0.547, 0.306, and 0.147 respectively.

Physicochemical Properties of Restructured Black Goat Jerky with Various Types of Ultra-Ground Seaweed Powders

  • Ui-Bin Baek;Hack-Youn Kim
    • Food Science of Animal Resources
    • /
    • v.44 no.2
    • /
    • pp.483-497
    • /
    • 2024
  • This study investigated the effects of ultra-ground seaweed powders (USP) on the physicochemical properties (proximate composition, mineral contents, pH, color, shear force, sensory evaluation, electronic nose, and electronic tongue) of restructured black goat jerky. Restructured black goat jerky was prepared using three different treatments, i.e., 3% (w/w) each of ultra-ground sea tangle (ST; Undaria pinnatifida), sea mustard (SM; Saccharina japonica), and sea string (SS; Gracilaria verrucosa) powders. Moisture and ash contents were significantly higher in the USP-treated group than in the control (p<0.05). Potassium, calcium, and zinc contents were significantly higher in the SM than in the other USP-treated groups (p<0.05). In contrast, pH values were significantly higher in the ST and SM than in the control and SS (p<0.05). CIE L*, CIE a*, CIE b*, and shear force were significantly lower in the USP-treated groups than in the control (p<0.05). Sensory evaluation revealed no significant difference in taste, texture, seaweed-like odor, and goaty flavor (p<0.05). Principal component analysis (PCA) and peak graph analysis of the electronic nose showed that the SS differed the most from the control compared with the other USP-treated groups, owing to the seaweed odor of ultra-ground SS powder. The PCA and ranking analysis of the electronic tongue showed that the umami taste of the SM was higher than that of the control and other USP-treated groups. Therefore, the potassium, calcium, zinc contents, and umami taste of reconstituted black goat jerky were significantly higher in the SM than in the control and other USP-treated groups.

Isoflavone Distribution and $\beta$-Glucosidase Activity in Home-made and Factory-produced Doenjang (재래식 및 개량식 된장의 아이소플라본 분포 및 $\beta$-glucosidase 활성 연구)

  • Lee, Seung-Wook;Park, Yong-Woo;Chang, Pahn-Shick;Lee, Jae-Hwan
    • Korean Journal of Food Science and Technology
    • /
    • v.42 no.2
    • /
    • pp.125-129
    • /
    • 2010
  • Isoflavone distribution and $\beta$-glucosidase activity in 16 commercially available doenjang samples were determined. Twelve of the samples were home-made doenjang (HMD) with a relatively long fermentation period and 4 of the samples were factory-produced doenjang (FPD) from four different manufactures. Total isoflavones (TI) in the HMD ranged from $370-723\;{\mu}g/g$, while those in FPD ranged from $179-537\;{\mu}g/g$. The isoflavone distribution in HMD was different from those in FPD. Generally, the TI in HMD was higher than those in FPD. The major isoflavone was aglycones, which ranged from 42.98 to 89.96% in HMD and from 35.51 to 93.48% in FPD. Isoflavones in the $\beta$-glucoside forms were not detected in tested FPD samples. Principal components analysis (PCA) of the isoflavone profiles showed that HMD were differentiated from FPD. First principal component (PC1) and second principal component (PC2) expressed 43.6 and 22.9% of the data variability, respectively. $\beta$-Glucosidase activity in doenjang was lower than that in raw soybeans. The results of this study can be used to understand the differences in the isoflavone distribution in traditionally manufactured and factory produced doenjang.

Studies on Morphological Variation Among Provenances of a Rare Rhododendron micranthum in Korea (희귀 식물 꼬리진달래의 형태적 변이)

  • Kim, Nam Young;Kim, Heung Sik;Kim, Sol Young;Park, Wan Geun
    • Journal of Korean Society of Forest Science
    • /
    • v.95 no.1
    • /
    • pp.55-59
    • /
    • 2006
  • The objectives of this study, an analysis of the morphological characteristics among six provenances of a rare Rhododendron micranthum could be used for the conservation of gene resources and could provide information on superior trees selection. The following results were obtained. Approximately Mt.worak region showed larger values at petal character. On the other hand, Bonghwa region showed smaller values at petal character. Yeonha-ri region showed larger values at leaf character. On the other hand, Bonghwa region showed smaller values at leaf character. The results of principal component analysis (PCA) for morphological characteristics showed that the first for principal components(PC's) explained 41.6% of the total variation. From th third PC explained 81.5% of the total variation. The first PC was correlated with those characteristics that were mainly related to the Petal length (PL), Leaf length (LL) width (LW), Stigma length (SL). The second PC was correlated with the Petiole length (PTW), Anther length (AL). The third PC was correlated with the Flower pedicel length (FPL), Filament length (FL). Therefore, these characteristics was important to analysis of the variation for morphological characteristics among provenances of Rhododendron micranthum. Cluster analysis using single linkage method based on morphological characteristics showed that six provenances of Rhododendron micranthum could be clustered into three groups. Group I is Jicdong-ri, Group II is Mt.worak and Yeonha-ri, and Group III is Taeback, Bonghwa, and Samcheok. These results corresponded well with that of principal component analysis.

Discrimination between Artemisia princeps and Artemisia capillaris Based on Near Infrared Spectroscopy Combined Multivariate Analysis

  • Lee, Dong-Young;Jeon, Min-Ji;Suh, Young-Bae;Kim, Seung-Hyun;Kim, Young-Choong;Sung, Sang-Hyun
    • Journal of Pharmaceutical Investigation
    • /
    • v.41 no.6
    • /
    • pp.377-380
    • /
    • 2011
  • The Artemisia princeps (Compositae) has been used in traditional Korean medicine for the treatment of microbial infections and inflammatory diseases. Since A. princeps is generally difficult to be discriminated from A. capillaris, A. caplillaris has been misused in place of A. princeps. To solve this problem, a rapid and nondestructive method for discrimination of A. princeps and A. capillaris samples was developed using near infrared spectroscopy (NIRS) in the present study. A principal component analysis (PCA) and a partial least squares discrimination analysis (PLS-DA) were performed to discriminate two species. As a result, with the use of PLS-DA, A. princeps and A. capillaris were clustered according to their genus. These outcomes indicated that the NIRS could be useful for the discrimination between Artemisia princeps and Artemisia capillaris.

A Study on Interior Noise Contribution Analysis of Trains based on OTPA Method (OTPA방법을 이용한 철도차량 실내 소음 기여도 분석 연구)

  • Jung, Jae-Deok;Hong, Suk-Yoon;Song, Jee-Hun;Kwon, Hyun-Woung;Noh, Hee-Min;Kim, Jun-Kon
    • Transactions of the Korean Society for Noise and Vibration Engineering
    • /
    • v.26 no.1
    • /
    • pp.97-103
    • /
    • 2016
  • The sensitivity of interior noise that the passengers perceive is comparatively high in the train, and structure-borne and air-borne types of noises come into the train. In this paper, to analyze contributions of these noise sources operational transfer path analysis(OTPA) is used. OTPA has some advantages of executing the contribution rates of several sources simultaneously, and in this work, 29 points are measured while running. Transfer functions between reference measurement points and response measurement points are calculated by the singular value decomposition(SVD) and Principal component analysis(PCA) method, and the frequency characteristics of the noise source are successfully derived. Also the interior noise is predicted and compared with measurement data to show the reliability.

Sensory Characteristic and Drivers of Liking for Functional Beverages (시판용 기능성 음료의 관능적 특성과 소비자 기호 유도 인자)

  • Lee, Ji-Hyeon;Yang, Jeong-Eun;Chung, Lana
    • Korean journal of food and cookery science
    • /
    • v.28 no.6
    • /
    • pp.741-751
    • /
    • 2012
  • This study was conducted to understand sensory characteristics of commercial functional beverages, to analyze and the drivers of liking and disliking of it by Korean consumers. Descriptive analysis and consumer taste testing were conducted with ten commercial products of functional beverages. Samples were consisted of good for beauty, relieving hangovers, and health tonics. For the descriptive analysis, 45 attributes were developed by ten panelists and it shows differences among the all samples. For the consumer testing, 81 panels evaluated the overall liking, acceptance of appearance, odor, flavor, and texture of 10 samples. As a result, attributes of brightness, yellow color, Nurungji flavor, roasted bean power flavor, and milky texture of functional beverages were positive drivers of liking, but attributes of astringent texture, bitter taste, and viscosity were negative drivers of liking on the commercial functional beverages.