• Title/Summary/Keyword: PCA(Principal Component Analysis

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Community Composition and Distribution of Fish Species Collected by Bottom Trawl from the Middle of the Yellow Sea in Summer (2008-2014) (황해중앙부에서 저층트롤에 의해 어획된 하계의 어류 종조성 및 분포특성 (2008-2014))

  • Koh, Eun Hye;Joo, Hyeong Woon;Lee, Dong Woo;Cha, Hyung Kee;Choi, Jung Hwa
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.49 no.6
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    • pp.849-855
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    • 2016
  • The community composition and distribution of fish species in the middle of the Yellow Sea were investigated in summer from 2008 to 2014. A total of 72 demersal fish species from 46 families and 17 orders were collected. The most common species were Larimichthys polyactis, Engraulis japonicus, and Chaeturichthys hexane, which accounted for 72.0% of the total number of individuals while Liparis tanakai, Larimichthys polyactis, and Lophius litulon accounted for 67.8% of the total biomass. A cluster analysis based on the Bray-Curtis similarity revealed that the fish community fell into three groups, according to latitude. Principal Component Analysis (PCA) and correlation analysis showed that variation in bottom water temperature could act as an indicator of variation in community structure and abundance of the dominant species. Characteristics of fish communities, such as the number of species, the total number of individuals ($/km^2$), and biomass ($/km^2$), were highly correlated with bottom water temperature and depth.

Wave and surface current measurement with HF radar in the central east coast of Korea (동해중부에서 HF Radar를 이용한 파랑 및 해수유동 관측)

  • Kim, Moo-Hong;Kim, Gyung-Soo;Kim, Hyeon-Seong
    • Journal of Advanced Marine Engineering and Technology
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    • v.38 no.6
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    • pp.771-780
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    • 2014
  • We installed HF Radar of Array type in Site A and Site B, observing the real-time wave and current in the central East coast of Korea. WERA(WavE RAdar) in this research uses HF Radar of Array Type with frequency range of 24.525 MHz, developed by Helzel, Germany. Each site is a 8-Channel system consisting of four transmitters and eight receivers, generating wave and current data, being observed every thirty minutes at the present time. HF Radar has grid resolution of an interval of 1.5 km using bandwidth of 150 kHz; The wave data covers an observation range of about 25 km, and the current data covers the maximum observation range of about 50 km. The Wave data observed by HF Radar was compared and verified with the AWAC data observed in the research sites. MIT also compared the Current data observed by HF Radar with Monthly the East sea average surface current and current flow pattern provided by KOHA(Korea Hydrographic and oceanographic Administration). The regression line and deviation of the comparison data of Wave was calculated by Principal Component Analysis, which showed correlation coefficient 0.86 and RMSD 0.186. Besides, data analysis of long-term changes of the current in the East coast showed that, during August and September, the North Korean Cold Current flow into the southward direction and the East Korean Warm Current flow into the northward direction in the coast.

Analysis of Environmental Factors of Geomorphology, Hydrology, Water Quality and Shoreline Soil in Reservoirs of Korea (우리나라 저수지에서 지형, 수문, 수질 및 호안 토양 환경요인의 분석)

  • Cho, HyunSuk;Cho, Kang-Hyun
    • Korean Journal of Ecology and Environment
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    • v.46 no.3
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    • pp.343-359
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    • 2013
  • In order to understand shoreline environment characteristics of Korean reservoirs, the interrelationships between environmental factors of geomorphology, hydrology, water quality and shoreline soil were analyzed, and the reservoir types were classified according to their environmental characteristics in the 35 reservoirs selected by considering the purpose of dam operations and annual water-level fluctuations. Geomorphological and hydrological characteristics of reservoirs were correlated with the altitude and the size scale of reservoirs. The annual range of water level fluctuation showed a wide variation from 1 m to 27 m in the various reservoirs in Korea. The levels of eutrophication of most reservoirs were mesotrophic or eutrophic. From the result of the soil texture analysis, sand contents were high in reservoir shorelines. Range, frequency and duration of water-level fluctuation were distinctive from the primary function of reservoirs. Flood control reservoirs had a wide range with low frequency and waterpower generation reservoirs had a narrow range with high frequency in the water-level fluctuation. According to the result of CART (classification and regression tree) analysis, the water quality of reservoirs was classified by water depth, range of water-level fluctuation and altitude. The result of PCA (principal component analysis) showed that the type of reservoirs was classified by reservoir size, water-level fluctuation, water quality, soil texture and soil organic matter. In conclusion, reservoir size, the water-level fluctuation, water quality and soil characteristics might be major factors in the environment of reservoir shorelines in Korea.

Comparison and Validation of Genetic Diversity and Population Structure Using Monomorphic SNP Data of the Korean Native Black Goat and Crossbred Goat (재래흑염소와 교잡종 염소의 Monomorphic SNP 분석을 통한 유전적 다양성과 집단구조의 비교 및 검증)

  • Kim, Kwan-Woo;Lee, Jinwook;Lee, Eun-Do;Lee, Sung-Soo;Choi, You-Lim;Lim, Hyun-Tae;Kim, Yousam;Lee, Sang-Hoon
    • Journal of Life Science
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    • v.30 no.11
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    • pp.1007-1011
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    • 2020
  • This study was conducted to analyze the genetic diversity and relationships that discriminate between Korean native black goat populations (Dangjin, Jangsu, Tongyoung, and Gyeongsang National University strains) and crossbred goats. Monomorphic single nucleotide polymorphisms (SNPs) in each strain were collected, and 133 common SNPs were selected for analysis. These 133 monomorphic SNPs showed differences in the genetic structure of the Korean native black goat and crossbred goats, and results from the principal component analysis (PCA) showed that the two can be clearly separated. Furthermore, analysis of the validation population comprising 70 individuals (Korean native black goats, n = 24; crossbred goats, n = 46) with the reference population showed that Korean native black goat strains and the reference population have the same genetic structure, and the crossbred goats shared only part of the genetic structure with the reference population. The result of the PCA analysis showed that the Korean native black goat strains form one population, whereas the foreign strains form another population which is more widely dispersed than the Korean native black goat strains. Thus, the results from this study can be used as baseline data for the conservation of genetic resources of Korean native black goat communities through utilization of monomorphic SNPs and for the introduction of exotic species for further improvement in genetic diversity. This study can also help reduce unnecessary inbreeding and gene flow between native strains.

Physicochemical and sensory characteristics of commercial RTD cold brew coffees (RTD (Ready-to-drink) 콜드브루커피의 이화학 및 감각특성 분석)

  • Song, Young-Ju;Hwang, Hyun-Ju;Lee, Seung-Joo
    • Korean Journal of Food Science and Technology
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    • v.51 no.1
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    • pp.35-41
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    • 2019
  • The sensory characteristics of eight commercial ready-to-drink (RTD) cold brew coffees were compared by descriptive analysis. The cold brew coffee samples were analyzed for hunter color values, brown color, turbidity, pH, titratable acidity, soluble solids, total phenolic content, and chlorogenic acid content. Three appearances, nine aroma, five flavor/taste, and four texture/mouth-feel related sensory attributes were evaluated by a panel of nine judges. The results of three-way analysis of variance of descriptive data showed that all sensory attributes except "fruit" aroma, "dark chocolate" aroma, "bitter" aroma, and "sweet" taste had significant differences among the samples (p<0.05). Based on the principal component analysis (PCA) of the descriptive data, the samples were primarily separated by first and second principal components, which accounted for 81.78% of the total variance among the samples with high intensities of "nutty aroma", "grain aroma", and "grain taste" versus "earth aroma", "sour aroma", "sour taste", "astringent", "smoothness", and "residual". In the correlation analysis of sensory terms and physicochemical parameters, titratable acidity and soluble solids showed significant positive correlations with earth aroma and smoothness characteristics.

Efficient Object Selection Algorithm by Detection of Human Activity (행동 탐지 기반의 효율적인 객체 선택 알고리듬)

  • Park, Wang-Bae;Seo, Yung-Ho;Doo, Kyoung-Soo;Choi, Jong-Soo
    • Journal of the Institute of Electronics Engineers of Korea SP
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    • v.47 no.3
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    • pp.61-69
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    • 2010
  • This paper presents an efficient object selection algorithm by analyzing and detecting of human activity. Generally, when people point any something, they will put a face on the target direction. Therefore, the direction of the face and fingers and was ordered to be connected to a straight line. At first, in order to detect the moving objects from the input frames, we extract the interesting objects in real time using background subtraction. And the judgment of movement is determined by Principal Component Analysis and a designated time period. When user is motionless, we estimate the user's indication by estimation in relation to vector from the head to the hand. Through experiments using the multiple views, we confirm that the proposed algorithm can estimate the movement and indication of user more efficiently.

Active Sonar Classification Algorithm based on HOG Feature (HOG 특징 기반 능동 소나 식별 기법)

  • Shin, Hyunhak;Park, Jaihyun;Ku, Bonhwa;Seo, Iksu;Kim, Taehwan;Lim, Junseok;Ko, Hanseok;Hong, Wooyoung
    • Journal of the Korea Institute of Military Science and Technology
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    • v.20 no.1
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    • pp.33-39
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    • 2017
  • In this paper, an effective feature which is capable of classifying targets among the detections obtained from 2D range-bearing maps generated in active sonar environments is proposed. Most conventional approaches for target classification with the 2D maps have considered magnitude of peak and statistical features of the area surrounding the peak. To improve the classification performance, HOG(Histogram of Gradient) feature, which is popular for their robustness in the image textures analysis is applied. In order to classify the target signal, SVM(Support Vector Machine) method with reduced HOG feature by the PCA(Principal Component Analysis) algorithm is incorporated. The various simulations are conducted with the real clutter signal data and the synthesized target signal data. According to the simulated results, the proposed method considering HOG feature is claimed to be effective when classifying the active sonar target compared to the conventional methods.

Ecoregional Characteristics of Korea for Application on Forest Landscape Restoration in North Korea (북한 산림경관복원 적용을 위한 한반도 생태지역 특성)

  • Yu, Jaeshim;Kim, Kyoungmin
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.18 no.6
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    • pp.61-71
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    • 2015
  • The objectives of this study are to construct an ecoregion map and to extract ecological factors from each ecoregion to adapt FLR (Forest Landscape Restoration) of North Korea. An ecological map was constructed by PCA(Principal Component Analysis) and MGC(Multivatiate Geographical Clustering). An ANOVA test verified the differences among ecoregions, and post-hoc pair wise comparisons were performed to determine similarities between them. Factor analysis was conducted to extract ecoregional characteristics. Ecoregions were distributed into clusters reflecting differences of south and north and of east and west of their ecological factors. About 12% of land area in North Korea shared similar ecological factors with South Korea, but the remaining 88% was found to be ecologically different. The ANOVA test showed a p-value of 0.000, indicating significant differences between the regions. Post-hoc pair wise comparisons indicated statistically significant similarities in annual mean temperature between ecoregion D and G, precipitation seasonality between ecoregion H and O, and precipitation of the warmest quarter between ecoregion K and O. Because ecoregion A and N showed same in their soil water contents, they were assumed that the dense of forest cover in the Southern ecoregion A is similar to that in the Northern ecoregion N of Korean peninsular. Based on the results of this study, it is necessary to accommodate quantitative and spatial based planning, when South Korea aids forest restoration projects in North Korea. In addition, it is recommended for both South and North Korea to share on Forest Landscape Restoration methodologies with each other.

Combining Adaptive Filtering and IF Flows to Detect DDoS Attacks within a Router

  • Yan, Ruo-Yu;Zheng, Qing-Hua;Li, Hai-Fei
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • v.4 no.3
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    • pp.428-451
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    • 2010
  • Traffic matrix-based anomaly detection and DDoS attacks detection in networks are research focus in the network security and traffic measurement community. In this paper, firstly, a new type of unidirectional flow called IF flow is proposed. Merits and features of IF flows are analyzed in detail and then two efficient methods are introduced in our DDoS attacks detection and evaluation scheme. The first method uses residual variance ratio to detect DDoS attacks after Recursive Least Square (RLS) filter is applied to predict IF flows. The second method uses generalized likelihood ratio (GLR) statistical test to detect DDoS attacks after a Kalman filter is applied to estimate IF flows. Based on the two complementary methods, an evaluation formula is proposed to assess the seriousness of current DDoS attacks on router ports. Furthermore, the sensitivity of three types of traffic (IF flow, input link and output link) to DDoS attacks is analyzed and compared. Experiments show that IF flow has more power to expose anomaly than the other two types of traffic. Finally, two proposed methods are compared in terms of detection rate, processing speed, etc., and also compared in detail with Principal Component Analysis (PCA) and Cumulative Sum (CUSUM) methods. The results demonstrate that adaptive filter methods have higher detection rate, lower false alarm rate and smaller detection lag time.

Comparison of Reproduction Systems of Genus Potentilla, Potentilla discolor in Korea and P. conferta in Mongol (Potentilla속 내 한국의 솜양지꽃(Potentilla discolor)과 몽골의 P. conferta 생식계의 비교)

  • Huh, Man-Kyu
    • Journal of Life Science
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    • v.17 no.9 s.89
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    • pp.1217-1223
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    • 2007
  • I investigated the reproduction system of nine natural populations of P. discolor in Korea and two Mongolian P. conferta populations. The measurements of 19 quantitative or qualitative morphological characters were taken on each of total individuals directly from their natural habitats. Multivariate principal component analyses (PCA) were conducted to detect differences among populations consid-ering several characters simultaneously of variances using the statistical analysis system. 19 morpho-logical characteristics between Korean Potentilla species and Mongolian Potentilla species showed a slight heterogeneity of variance. The length of internodes (LFL and LSI) and characteristics of root (LLR and NOR) were shown a significant difference between two species (P<0.05). The number of ra-mets in P. conferta decreased with increasing geographic distance from viviparity. However, P. discolor has most ramets at distance intervals $60{\sim}80$ cm. In light conditions, P. discolor was significantly less resilience than P. conferta. In drought conditions, although there was not shown significant difference, P. conferta was less resilience than P. discolor. The core analysis indicates that P. conferta is the more resistant species than P. discolor and usually propagates by clonal growth during several strong envi-ronmental disadvantages such as drought events.