• Molecules and Cells
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• 제25권2호
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• pp.301-304
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• 2008

Microsatellites, short tandem repeats, are useful markers for genetic analysis because of their high frequency of occurrence over the genome, high information content due to variable repeat lengths, and ease of typing. To establish a panel of microsatellite markers useful for genetic studies of the Korean population, the allele frequencies and heterozygosities of 207 microsatellite markers in 119 unrelated Korean, Indian and Pakistani individuals were compared. The average heterozygosity of the Korean population was 0.71, similar to that of the Indian and Pakistani populations. More than 80% of the markers showed heterozygosity of over 0.6 and were valuable as genetic markers for genome-wide screening for disease susceptibility loci in these populations. To identify the allelic distributions of the multilocus genetic data from these microsatellite markers, the population structures were assessed by clustering. These markers supported, with the most probability, three clustering groups corresponding to the three geographical populations. When we assumed only two hypothetical clusters (K), the Korean population was separate from the others, suggesting a relatively deep divergence of the Korean population. The present 207 microsatellite markers appear to reflect the historical and geographical origins of the different populations as well as displaying a similar degree of variation to that seen in previously published genetic data. Thus, these markers will be useful as a reference for human genetic studies on Asians.

• Asian Pacific Journal of Cancer Prevention
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• 제15권17호
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• pp.7377-7381
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• 2014

CYP2E1 PstI polymorphism G-1259C (rs3813867) genotype distributions vary significantly among different populations and are associated with both diseases, like cancer, and adverse drug effects. To date, there have been limited genotype distributions and allele frequencies of this polymorphism reported in the three major indigenous ethnic groups (KadazanDusun, Bajau, and Rungus) in Sabah, also known as North Borneo. The aim of this study was to investigate the genotype distributions and allele frequencies of the CYP2E1 PstI polymorphism G-1259C in these three major indigenous peoples in Sabah. A total of 640 healthy individuals from the three dominant indigenous groups were recruited for this study. Polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) at G-1259C polymorphic site of CYP2E1 gene was performed using the Pst I restriction enzyme. Fragments were analyzed using agarose gel electrophoresis and confirmed by direct sequencing. Overall, the allele frequencies were 90.3% for c1 allele and 9.7% for c2 allele. The genotype frequencies for c1/c1, c1/c2 and c2/c2 were observed as 80.9%, 18.8%, and 0.3%, respectively. A highly statistical significant difference (p<0.001) was observed in the genotype distributions between indigenous groups in Sabah with all Asian and non-Asian populations. However, among these three indigenous groups, there was no statistical significant difference (p>0.001) in their genotype distributions. The three major indigenous ethnic groups in Sabah show unique genotype distributions when compared with other populations. This finding indicates the importance of establishing the genotype distributions of CYP2E1 PstI polymorphism in the indigenous populations.

• Asian-Australasian Journal of Animal Sciences
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• 제16권7호
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• pp.946-951
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• 2003

The Genetic diversity and relationship of native Siri (Bos indicus) cattle populations of Bhutan were evaluated using 20 microsatellite markers. A total of 120 Siri cattle were sampled and were grouped into four populations according to their geographical locations which were named Siri West, Siri South, Siri Central and Siri East cattle. For each, 30 individuals were sampled. In addition, 30 samples each of Indian Jaba (B. indicus), Tibetan Goleng (B. taurus), Nepal Hill cattle (B. indicus), Holstein Friesian (B.taurus) and Mithun (B. frontalis) were typed. The mean number of alleles per loci (MNA) and observed heterozygosity (Ho) were high in the Siri populations ($MNA=7.2{\pm}0.3$ to $8.9{\pm}0.5$ and $Ho=0.67{\pm}0.04$ to $0.73{\pm}0.03$). The smallest coefficient of genetic differentiation and genetic distance ($F_{ST}=0.015$ and $D_A=0.073$) were obtained between Siri West and Siri Central populations. Siri East population is genetically distinct from the other Siri populations being close to the Indian Jaba ($F_{ST}=0.024$ and $D_A=0.084$). A high bootstrap value of 96% supported the close relationship of Siri South, Siri Central and Siri West, while the relationship between Siri East and Jaba was also supported by a high bootstrap value (82%). Data from principal component analysis and individual assignment test were in concordance with the inference from genetic distance and differentiation. In conclusion we identified two separate Siri cattle populations in Bhutan at the genetic level. One population included Siri cattle sampled from the West, Central and South of the country and the other Siri cattle was sampled from the East of the country. We suggest that Siri cattle conservation program in Bhutan should focus on the former population as it has received less genetic influence from other cattle breeds.

• Animal cells and systems
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• 제3권3호
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• pp.303-309
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• 1999

Inter- and intraspecific genetic relationships between Rana amurensis from Korea and Russia and other brown frogs were investigated by nucleotide sequence of a 504 base pair (bp) fragment of the mitochondrial cytochrome b gene. Nucleotide sequence similarities among Korean populations of R. amurensis ranged from 99.6% to 97.6% and 98.8% within Russian populations. The nucleotide sequence similarity between Korean and Russian R. amurensis ranged from 86.9% to 85.5%. Based on Kimura-2-parameter distance, the sequence divergence between R. amurensis from Korea and Russia was 16.18% and 18.04% among other related brown frogs. interspecific sequence divergences among R. amurensis and other related brown frogs diverged by 20.3%. Using an estimate of 2-4% mitochondrial DNA sequence divergence per million years, Korean and Russian R. amurensis diverged about 8 to 4 million years ago (Mya) and other brown frogs diverged about 9 to 5 Mya from ancestral frogs and distributed from North Asia to Sakhalin in a short time. In the neighbor-joining and UPGMA tree R. amurensis was clustered into two groups with Korean and Russian populations and the other brown frogs were grouped separately with diverged trichotomous clusters (R. dybowskii and R. pirica, R. okinavana and R. tsushimensis, and R. japonica and R. longicrus).

• ALGAE
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• 제32권1호
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• pp.47-55
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• 2017

We explored feeding by the mixotrophic ciliate Mesodinium rubrum, heterotrophic nanoflagellates (HNFs), and small ciliates (<$30{\mu}m$ in cell length) on natural populations of heterotrophic bacteria in Masan Bay, Keum River Estuary, and in the coastal waters of the Saemankeum area, Korea when M. rubrum red tides occurred. We also measured ingestion rates of M. rubrum on cultured heterotrophic bacteria as a function of bacterial concentration in the laboratory. The ingestion rates of M. rubrum on natural populations of heterotrophic bacteria (2.3-16.8 bacteria $grazer^{-1}h^{-1}$) were comparable to or lower than those of co-occurring HNFs (10.7-41.7 bacteria $grazer^{-1}h^{-1}$), but much lower than those of co-occurring small ciliates (76.0-462.2 bacteria $grazer^{-1}h^{-1}$). However, the maximum grazing coefficient of M. rubrum ($0.245d^{-1}$) on natural populations of heterotrophic bacteria was much higher than that of small ciliates ($0.089d^{-1}}$), and slightly higher than that of HNFs ($0.204d^{-1}$). With increasing bacterial concentrations, ingestion rates of M. rubrum on cultured heterotrophic bacteria continuously increased, but became saturated at higher prey concentrations over $1-5{\times}10^6cells\;mL^{-1}$. The maximum ingestion rate of M. rubrum on cultured heterotrophic bacteria was 34.4 bacteria $grazer^{-1}h^{-1}$. Based on the present study, it is suggested that M. rubrum may be an important grazer of heterotrophic bacteria and sometimes have considerable grazing impact on natural populations of heterotrophic bacteria.

• Animal cells and systems
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• 제4권1호
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• pp.39-44
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• 2000

To assess the genetic diversity and population structure of Korean K. borealis, allozyme analysis was performed. The average genetic variability of Korean K. borealis populations was %P=13.2, Ho=0.048, and He=0.045. This value was the lowest in comparison with other Korean amphibian species studied. Also, the value was much lower than that of a reference population from Chinese K. borealis (%P=50, Ho=0.125, He=0.172). Wright's F-statistics showed that Korean K. borealis has distinctly low level of gene flow among regional populations (F$_{ST}$=0.339, Nm=0.487) in comparison with other Korean amphibian species studied. However, the average level of genetic divergence among Korean K. borealis populations was moderate (Nei's D=0.020). Therefore, it appeared that low levels of genetic diversity (He=0.045) and gene flow (Nm=0.487) among regional populations ave probably due to the results of decreasing population size and patchy distribution of this species in Korea.

• 한국응용곤충학회지
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• 제61권1호
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• pp.255-266
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• 2022

본 연구에서는 감귤원에서 초생재배 유무(초생재배 W, 제초제 살포 NW)와 합성피레스로이드계 살포유무(살포 P, 무살포 NP)에 따른 귤응애의 개체군 동태를 구명하고자 수행되었다. 두 가지 기본적인 가설로 1) 초생재배는 천적의 서식처를 제공하여 천적의 정착을 높이므로 귤응애의 발생을 감소시키는 요인으로 작용하며, 2) 합성피레스로이드계는 천적을 제거하여 귤응애의 밀도를 증가시키는 요인으로 가정하였다. 관측된 천적 개체군(주로 이리응애류와 마름응애류)의 발생은 가정에 근거한 기대치와 크게 다르지 않았다. 2011년의 경우 NW+NP 처리구와 W+NP 처리구에서 차이가 있었으나, 2012년 실험에서는 기대치와 관측치가 거의 일치하였다. 전체적으로 약제효과가 뚜렷하게 나타나서 합성피레스로이드계 살포시 천적이 유의하게 감소하였다. 잡초효과는 엇갈리는 결과를 보였는데, 봄-유래 여름 개체군 대비 가을 개체군의 증가 등을 고려할 때 초생재배를 하는 경우 천적의 발생이 증가하였다. 다만, 합성피레스로이드계 살포구에서 귤응애가 감소하는 비이상적인 결과는 귤응애의 합성피레스로이드계에 대한 강한 기피성을 전제로 해석할 수 있었다.

• 한국동물학회지
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• 제30권3호
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• pp.211-221
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• 1987

Starch gel electrophoresis was used to estimate the degree of genic variation and genetic relatedness among twelve populations of the Cat-Sanke(Elaphe diene) in Korea. Out of the 17 loci examined 9 loci (Mdh-2, Ldh-1, Ldh-2, Idh-1, Idh-2, Adh, Aco-3, ep, Got-1) were monomorphic with identical mobility in all populations, 4 loci (Pgm, Mpi, Pept-1, Got-2) were nearly identical with minor allele frequency differences, and 4 loci (Mdh-1, Fgi, Est-2, 6psd) showed moderate variation. Levels of genic variation were similar to those found for other reptilian species. The mean genetic similarity value(S) among twelve populations is 0.966. Chechu population was slightly remote genetically from the mainland populations.

• Animal cells and systems
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• 제4권2호
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• pp.131-140
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• 2000

The pattern of variations in cone sex ratio and pollen traits such as pollen number and size was examined for two years in populations of red pines In Korea. We evaluated; (1) the relationship between tree size and cone sex ratio, (2) the relationship between year and cone sex ratio, and (3) the relationship between cone sex ratio and pollen traits. Larger trees in height and circumference at breast height produced more male as well as female cones. However, cone sex ratio was independent of these plant sizes. Across the two populations, both female cone numbers per tree and male cone numbers per new shoot increased 2.2 and 1.2 times, respectively, in 1999 compared to 1998, while the yearly pattern of male cone-bearing shoots per tree differed significantly between populations. Thus, cone sex ratio varied significantly between years in one of the two populations. Pollen traits such as the number of pollen grains and diameter did not vary significantly among populations. Pollen diameter and grain numbers per male cone were significantly negatively correlated with the cone sex ratio in two populations and one population, respectively. Trees which stopped female cone production in the first year and those which produced female cones in both years differed in the cone sex ratio and pollen size in the second year. The long duration of one reproductive episode and the potential of masting in red pines emphasize the need to conduct long-term studies on the dynamics of cone production, cone sex ratio, and simultaneous changes in pollen traits in red pines.

• 한국동물학회:학술대회논문집
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• 한국동물학회 1998년도 한국생물과학협회 학술발표대회
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• pp.352.2-352
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• 1998

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