• Title/Summary/Keyword: Natural habitat

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Changes of River Morphology in the Mid-lower Part of Nakdong River Basin after the 4 Large River Project, South Korea (4대강 사업 후 낙동강 중·하류의 하중도와 제외지 지형변화)

  • Im, Ran-Young;Kim, Ji Yoon;Choi, Jong-Yun;Do, Yuno;Joo, Gea-Jae
    • Korean Journal of Ecology and Environment
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    • v.48 no.3
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    • pp.188-194
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    • 2015
  • River channel dredging and riparian development have been influenced morphology and quantity of natural river habitat. We compared distribution of riverside land and alluvial island in the Nakdong River with field survey and remote sensing analysis after the 4 Large River Project in South Korea. We digitized geomorphological elements, includes main channel, riverside land, and alluvial island by using georeferenced aerial photos taken in pre-dredging (2008) and post-dredging (2012) periods. Field survey was followed in 2012 for a ground truth of digitized boundaries and identification of newly constructed wetland types such as pond, channel, branch, and riverine type. We found that during the dredging period, riverside land and alluvial island were lost by 20.2% and 72.7%, respectively. Modification rate of riverside land was higher in the section of river kilometer 50~90, 140~180, and 210~270. Alluvial island had higher change rate in the section of river kilometer 50~70, 190~210, and 270~310. Average change rate for the riverside land and alluvial island was $-1.02{\pm}0.14km^2{\cdot}10km^{-1}$ and $-0.05{\pm}0.05km^2{\cdot}10km^{-1}$, respectively. Channel shaped wetlands (72.5%) constituted large portion of newly constructed wetlands.

Bartonella rochalimae, B. grahamii, B. elizabethae, and Wolbachia spp. in Fleas from Wild Rodents near the China-Kazakhstan Border

  • Yin, Xiaoping;Zhao, Shanshan;Yan, Bin;Tian, Yanhe;Ba, Teer;Zhang, Jiangguo;Wang, Yuanzhi
    • Parasites, Hosts and Diseases
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    • v.57 no.5
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    • pp.553-559
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    • 2019
  • The Alataw Pass, near the Ebinur Lake Wetland (northwest of China) and Taldykorgan (east of Kazakhstan), is a natural habitat for wild rodents. To date, little has been done on the surveillance of Bartonella spp. and Wolbachia spp. from fleas in the region. Here we molecularly detected Bartonella spp. and Wolbachia spp. in wild rodent fleas during January and October of 2016 along the Alataw Pass-Kazakhstan border. A total of 1,706 fleas belonging to 10 species were collected from 6 rodent species. Among the 10 flea species, 4 were found to be positive for Wolbachia, and 5 flea species were positive for Bartonella. Molecular analysis indicated that i) B. rochalimae was firstly identified in Xenopsylla gerbilli minax and X. conforms conforms, ii) B. grahamii was firstly identified in X. gerbilli minax, and iii) B. elizabethae was firstly detected in Coptopsylla lamellifer ardua, Paradoxopsyllus repandus, and Nosopsyllus laeviceps laeviceps. Additionally, 3 Wolbachia endosymbionts were firstly found in X. gerbilli minax, X. conforms conforms, P. repandus, and N. laeviceps laeviceps. BLASTn analysis indicated 3 Bartonella species showed genotypic variation. Phylogenetic analysis revealed 3 Wolbachia endosymbionts were clustered into the non-Siphonaptera Wolbachia group. These findings extend our knowledge of the geographical distribution and carriers of B. rochalimae, B. grahamii, B. elizabethae, and Wolbachia spp. In the future, there is a need for China-Kazakhstan cooperation to strengthen the surveillance of flea-borne pathogens in wildlife.

Geographic Genetic Contour of a Ground Beetle, Scarites aterrimus (Coleoptera: Carabidae) on the Basis of Mitochondrial DNA Sequence

  • Wang, Ah-Rha;Kim, Min-Jee;Cho, Young-Bok;Wan, Xinlong;Kim, Ik-Soo
    • International Journal of Industrial Entomology and Biomaterials
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    • v.22 no.2
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    • pp.65-74
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    • 2011
  • The Scarites aterrimus (Coleoptera: Carabidae), is one of the carabid beetles dwelling exclusively on coastal sandy dunes. Habitat deterioration and equivalent activity have greatly concerned population declines in several species dwelling on the coastal sandy dunes. As a first step to establish long-term conservation strategy, we investigated the nation-wide magnitude and nature of genetic diversity of the species. As a first step, we sequenced a portion of mitochondrial COI gene, corresponding to "DNA Barcode" region (658 bp) from a total of 24 S. aterrimus individuals collected over nine sandy dunes belonging to four Korean provinces. The sequence analysis evidenced moderate to low magnitude of sequence diversity compared with other insect species distributed in Korean peninsula (0.152% to 0.912%). The presence of closely related haplotypes and relatively high gene flow estimate collectively suggest that there had been no historical barriers that bolster genetic subdivision. Population decline was postulated on the basis of several missing haplotypes that are well found in the species with a large population size. This interpretation is consistent with field observation of small population size in the coastal sandy dune habitats. The highest genetic diversity estimates were found in the coastal sand dune population of Seogwipo, Jeju Island, justifying a prior attention to the population, in order to sustain overall genetic diversity of the species. Further scrutinized study might be required for further robust conclusion.

Stock identification of minor carp, Cirrhinus reba, Hamilton 1822 through landmark-based morphometric and meristic variations

  • Ethin, Rokhsana;Hossain, Md Shakhawate;Roy, Animesh;Rutegwa, Marcellin
    • Fisheries and Aquatic Sciences
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    • v.22 no.6
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    • pp.12.1-12.8
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    • 2019
  • Background: Wild fish populations stock is continuously diminishing in the Indo-Ganges river basin, and the population status of most fishes is unidentified. The identification of the population status and the conservation of commercially important and endemic wild fish populations in this region are crucial for the management. The aim of this paper was to identify the population status of Cirrhinus reba, a promising aquaculture but vulnerable species in the Indo-Ganges river basin in Bangladesh. Methods: C. reba samples were collected from four isolated populations of the Brahmaputra (n = 30), the Padma (33), the Karatoya (31), and the Jamuna Rivers (30) in Bangladesh, and the population status was evaluated using morphometric and landmark comparisons. Data were analyzed with the Kruskal-Wallis test, univariate analysis, discriminant function analysis, and the formation of a dendrogram. Results: Three meristic characters (Pectoral fin rays, caudal fin rays, scale in lateral lines), four morphometric characters (head length, pre-orbital length, post-orbital length, maximum body depth), and truss measurement (4-7) were significantly different among the stocks. The step-wise discriminant function analysis retained 15 variables from morphometric and landmark measurements that significantly differentiated the populations based on the constructed DFI and DFII. Discriminate function analysis also showed that 91.2% of the original groups were classified into their correct samples. The cluster analysis of Euclidean distances placed the Jamuna population in one cluster and the Brahmaputra, the Padma, and the Karatoya populations in the second one. Conclusion : Morphological differences among the stock were probably due to different ancestral origin. This is the first report about population status of C. reba in their natural habitat of the Indian subcontinent. Further genetic studies and the evaluation of environmental impact on C. reba populations in Bangladesh are suggested to support our findings.

Vegetation and Landscape Characteristics at the Peaks of Mts. Seorak, Jiri and Halla (설악산, 지리산, 한라산 산정부의 식생과 경관 특성)

  • Kong, Woo-seok;Kim, Gunok;Lee, Sle-gee;Park, Hee-na;Kim, Hyun-hee;Kim, Da-bin
    • Journal of Climate Change Research
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    • v.8 no.4
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    • pp.401-414
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    • 2017
  • Vegetation and landscape characteristics at the three highest summits of Republic of Korea, i.e. Seoraksan, Jirisan and Hallasan, are analyzed on the basis of species composition, physiognomy, vegetation distribution and structure of alpine plants, along with landform, geology, soil and habitat conditions. Dominant high mountain plants at three alpine and subalpine belts contain deciduous broadleaved shrub, Rhododendron mucronulatum var. ciliatum (31.6%), and evergreen coniferous small tree, Pinus pumila (26.3%) at Seoraksan, deciduous broadleaved tree, Betula ermanii (35.3%), evergreen coniferous tree, Picea jezoensis (23.5%) at Jirisan, and evergreen coniferous tree, Abies koreana (22.6%), deciduous broadleaved shrub, Rhododendron mucronulatum var. ciliatum, and Juniperus chinensis var. sargentii (19.4%) at Hallasan, respectively. Presence of diverse landscapes at the peak of Seoraksan, such as shrubland, grassland, dry land along with rocky areas, and open land may be the result of hostile local climate and geology. High proportion of grassland and wetland at the top of Jirisan may related to gneiss-based gentle topography and well developed soil deposits, which are beneficial to keep the moisture content high. Occurrence of grassland, shrubland, dry land, conifer vegetation, and rocky area at the summit of Hallasan may due to higher elevation, unique local climate, as well as volcanic origin geology and soil substrates. Presences of diverse boreal plant species with various physiognomy at alpine and subalpine belts, and wide range of landscapes, including rocky, grassland, shrubland, wetland, and conifer woodland, provide decisive clues to understand the natural history of Korea, and can be employed as an relevant environmental indicator of biodiversity and ecosystem stability.

Studies on phosphorus deficiency in the Qianbei-Pockmarked goat

  • Shen, Xiaoyun;Chi, Yongkuan;Huo, Bin;Xiong, Kangning
    • Asian-Australasian Journal of Animal Sciences
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    • v.32 no.6
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    • pp.896-903
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    • 2019
  • Objective: Qianbei-Pockmarked goats are affected by a disorder locally referred to as 'Ruanguzheng Disorder', which is characterized by emaciation, lameness, muscular relaxation, stiffness of the extremities, and abnormal curvatures of the long bones. Our objective was to determine the relationship between the disorder and phosphorus deficiency. Methods: Tissue samples were collected from affected and healthy animals, while soil and herbage samples were collected from affected and healthy pastures. Biochemical parameters were determined using an automatic biochemical analyzer (OLYMPUS AU 640, Olympus Optical Co., Tokyo, Japan). Mineral contents in soil, forage, and tissue were determined using a Perkin-Elmer AAS5000 atomic absorption spectrophotometer (Perkin-Elmer, Norwalk, CT, USA). Results: The results showed that phosphorus contents in herbages from affected pastures were markedly lower than those from healthy areas (p<0.01), and the ratio of calcium to phosphorus in the affected herbages was 12.93:1. The phosphorus contents of wool, blood, tooth, and bone from affected animals were also markedly lower than those from healthy animals (p<0.01). Serum phosphorus values in affected animals were much lower than those in healthy animals, while serum alkaline phosphatase values from affected animals were markedly higher than those from healthy animals (p<0.01). Inorganic phosphorus values from affected animals were approximately half of that in the control group. Supplementation of disodium hydrogen phosphate prevented and cured the disorder. Conclusion: This study demonstrates that Ruanguzheng disorder in Qianbei-Pockmarked goats is primarily caused by phosphorus deficiencies in herbage due to fenced pastures and natural habitat fragmentation.

Molecular identification of Allium ochotense and Allium microdictyon using multiplex-PCR based on single nucleotide polymorphisms

  • Kim, Yong-Bog;Ramekar, Rahul Vasudeo;Choi, Seong-Jin;Choi, Byoung-Gon;Kim, Se-Won;Moon, Youn-Ki;Noh, Hee-Sun;Lee, Ju-Kyong;Hong, Jin-Sung;Park, Nam-Il;Choi, Ik-Young;Choi, Seon-Kang;Park, Kyong-Cheul
    • Horticulture, Environment, and Biotechnology : HEB
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    • v.59 no.6
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    • pp.865-873
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    • 2018
  • Allium ochotense and Allium microdictyon are commonly known as 'Mountain garlic' and are popular, economically important species in many countries such as Korea, China, and Mongolia. Their leaves are used as culinary side dishes and in traditional medicines. In Korea, these two species are at risk of extinction due to damage to their natural habitat and thus, conservation and breeding programs are needed. However, their identification relies mostly on morphological data, which is limited and until recently, led to classifying these two species under A. victorialis. In the present study, a simple and reliable method of molecular identification was developed to distinguish A. ochotense from A. microdictyon that targets four barcoding regions: the internal transcribed spacer (ITS), the maturase K gene (matK), the chloroplast psbA-trnH intergenic region, and the ribulose-bisphosphate carboxylase large subunit gene (rbcL). Single nucleotide polymorphisms (SNPs) were found in ITS and matK regions, and species-specific primers were designed based solely on the SNP at position 680 of the ITS region that could differentiate A. ochotense from A. microdictyon. Using these primers in amplification refractory mutation system (ARMS)-PCR, A. ochotense, and A. microdictyon could be simultaneously and efficiently distinguished. This study is the first to report a simple, rapid, and efficient method for discriminating A. ochotense and A. microdictyon, indicating the utility of species-specific markers in the development of conservation and breeding programs.

Phytosociological Characteristics of Qeurcus acutissima Forest in Daecheong-dam basin (대청댐 유역 상수리나무림의 식물사회학적 특성)

  • Kim, Sung-Yeol;Moon, Geon-Soo;Lim, Sung-Been;Paek, Hye-Jung;Song, Won-Kyong;Choi, Jae-Yong
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.24 no.2
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    • pp.85-102
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    • 2021
  • Phytosociological characteristics on Quercus acutissima forests distribution in Daechong-dam basin survey has been carried out using Z.-M. School's methodology and numerical-classification analyses. A total of 43 phytosociological relevés were sampled. Syntaxa were described as Oplismenus undulatifolius-Quercus acutissima community(typicum subcommunity, Phryma leptostachya var. asiatica subcommunity, Ulmus davidiana var. japonica subcommunity), Quercus acutissima community and Quercus variabilis-Quercus acutissima community (typicum subcommunity, Castanea crenata subcommunity). The above three plant communities were classified with species composition reflecting local environmental characteristics of mountain topographies, inclination degrees, and rock exposure rates. Conclusively, those communities were recognized as secondary vegetation affected by high intensity and frequency of human impacts as they inhabited in southward hill lands and low lying grounds in mountains adjacent to human settlements and arable lands. Quercus acutissima community was classified as rural type syntax based on their inlandward distribution and species composition differences from urban forests. Afforest process and natural succession were discussed in relation with habitat environmental elements of Quercus acutissima forest in the survey area.

Distribution of the Genetic Resource and the Biomass of Root Bark of Ulmaceae Species

  • Park, Dong Jin;Yong, Seong Hyeon;Yang, Woo Hyeong;Seol, Yuwon;Choi, Eunji;Kim, Hyeong Ho;Ahn, Mi-Jeong;Choi, Myung Suk
    • Journal of agriculture & life science
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    • v.53 no.2
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    • pp.65-75
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    • 2019
  • Stem and root of elm trees have used as traditional medical materials, but there is little information on the distribution and resources of habitats. Korean native growing Ulmus spp. (U. davidiana var. Japonica, U. parvifolia, U. davidiana, and U. macrocarpa) genetic resources studied through The National Forest Inventory of Korea data and field survey. The distributions of U. davidiana var. japonica according to elevation distributed evenly. Both U. parvifolia and U. davidiana were inhabited mostly at less than 200 m of altitude. Each Ulmaceae species widely were distributed nationwide, but a dominant species was different depending on locals. It observed that Ulmaceae inhabits mainly in steep slopes of 31-45 degrees. Most of the habitats regenerated by natural seeding and the most abundant species were a codominant tree. Distribution of trees in U davidiana var. japonica was 7 m-13 m, and in young U. parvifolia and U. macrocarpa, more than 25% of young trees less than 7 m observed. The distribution of the diameter of breast height of the U. davidiana var. japonica was 46.4% for 11-20 cm, 52.6% for 11-20 cm in U. parvifolia. The average T/R ratio was 0.83, and the mean weight ratio of root bark was 62%. As the results of this study, the domestic Ulmaceae biomassare very small. It is difficult to harvest in that the habitat on the slope. Thus, it is too hard to develop functional materials using biomass at present. Therefore, it is necessary to develop technology for the selection and propagation of elite trees of Ulmaceae.

A Study on Water Environment and Benthic Macroinvertebrate Community in Reclaimed Wastewater Effluent Dominated Stream (하수처리수 방류 하천의 물환경과 저서성 대형무척추동물 군집 생태 연구)

  • Son, Jung-Won;Kwag, Jin-Suk;Cho, Gab-Je;Ryou, Dong-Choon
    • Journal of Korean Society on Water Environment
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    • v.37 no.3
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    • pp.190-203
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    • 2021
  • Water quality, benthic macroinvertebrate communities, and other factors were investigated to explore the effects of the effluent discharge from a sewage treatment plant into Jwagwang stream in Busan in 2019. During the study period, the flow rate of this stream was in the range of 10,400 m3/day to 52,200 m3/day except for the discharge of about 24,000 m3/day of the effluent. After discharge, the flow velocity increased by about 65% and the water depth increased by about 40%. At sites downstream of the discharge point, BOD, COD, TOC, T-N, T-P, and other water quality values were worse than those of the upstream sites. The periphytic algal chlorophyll-a concentrations in the natural substrata were higher than those of the upstream sites, especially in May and August. However, at sites downstream of the discharge point, the individual numbers of Annelida were decreased and individual numbers of the insecta of arthropoda were increased. Also, species numbers and the diversity and dominance indexes were improved in the sites downstream of the discharge point. The functional feeding groups (FFGs) of collector-filterers were increased and the habitat orientation groups (HOGs) of sprawlers, burrowers, and clingers were especially increased at the sites with additional reclaimed wastewater effluent flow. Regardless of the effluent discharge, BMI, an indicator of ecological stream health using benthic macroinvertebrate species, did not show large gaps between the study points. Although the water quality of the sites downstream of the discharge point was much worse than those upstream, their ecosystem soundness was better than those of the upstream sites from an ecological perspective.