• Title/Summary/Keyword: Native Japanese Chickens

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The Genetic Variability and Relationships of Japanese and Foreign Chickens Assessed by Microsatellite DNA Profiling

  • Osman, S.A.M.;Sekino, M.;Nishihata, A.;Kobayashi, Y.;Takenaka, W.;Kinoshita, K.;Kuwayama, T.;Nishibori, M.;Yamamoto, Y.;Tsudzuki, M.
    • Asian-Australasian Journal of Animal Sciences
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    • v.19 no.10
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    • pp.1369-1378
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    • 2006
  • This is the first study in which genetic variability and relationships of a large number of Japanese chicken breeds were revealed along with those of several foreign breeds by using microsatellite DNA polymorphisms. Twenty-eight breeds (34 populations) of native Japanese chickens and seven foreign breeds or varieties were analyzed. The mean number of alleles per locus, the proportion of the polymorphic loci, and the expected average heterozygosity ranged from 1.75 to 4.70, from 0.55 to 1.00, and from 0.21 to 0.67, respectively. Microsatellite alleles being unique to a particular population were detected in some populations. The $D_A$ genetic distance between populations was obtained from allele frequency for every pair of the populations to construct a neighbor-joining tree. According to the phylogenetic tree, excluding a few exceptions, native Japanese chicken breeds and foreign breeds were clearly separated from each other. Furthermore, the tree topology divided native Japanese chickens into four main classes, which was almost in accordance with the classification based on body morphology; that is, (1) Cochin type, (2) Malay type, (3) layer type, and (4) intermediate type between Malay and layer types. This is the first finding for native Japanese chickens.

Genetic Variability and Relationships of Native Japanese Chickens Assessed by Microsatellite DNA Profiling - Focusing on the Breeds Established in Kochi Prefecture, Japan -

  • Osman, S.A.-M.;Sekino, M.;Nishibori, M.;Yamamoto, Y.;Tsudzuki, M.
    • Asian-Australasian Journal of Animal Sciences
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    • v.18 no.6
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    • pp.755-761
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    • 2005
  • Blood samples were collected from eight native Japanese breeds of chickens (Miyadi-dori, Ohiki, Onaga-dori, Shoukoku, Tosa-Jidori, Tosa-Kukin, Toutenkou and Uzurao) and two foreign breeds of chickens (White Leghorn and Rhode Island Red) to examine the genetic variability and relationships among the breeds by using a microsatellite DNA technique. Except for the Shoukoku breed, the other Japanese chicken breeds all originate from Kochi Prefecture. Ohiki, Onaga-dori, Tosa-Jidori, Toutenkou and Uzurao are fancy fowl, and Miyadi-dori and Tosa-Kukin are utility fowl. Among the fancy fowl, Ohiki, Onaga-dori, and Toutenkou males have thick and long feathers in the saddle and tail. Genetic variabilities of the 20 microsatellites examined, varied depending on the breed: the mean number of alleles per locus ranged from 2.05 (Miyadi-dori) to 3.90 (Rhode Island Red); proportion of polymorphic loci ranged from 0.75 (Miyadi-dori) to 1.00 (Rhode Island Red, Shoukoku and Uzurao); and mean expected heterozygosity ranged from 0.330 (Miyadi-dori) to 0.607 (Rhode Island Red). Unique microsatellite alleles were detected in each breed. Using the neighbour-joining method, phylogenetic trees were constructed based on the genetic distances of D$_{A}$ and D$_{ST}$. Among the breeds originating from Kochi Prefecture, fancy and utility breeds belonged to different clusters. Among the fancy breeds, those having thick and long feathers in the tail and saddle showed a close genetic relationship to the Shoukoku breed, which also has thick and long feathers in the tail and saddle.

Characteristics of Seven Japanese Native Chicken Breeds Based on Egg White Protein Polymorphisms

  • Myint, Si Lhyam;Shimogiri, Takeshi;Kawabe, Kotaro;Hashiguchi, Tsutomu;Maeda, Yoshizane;Okamoto, Shin
    • Asian-Australasian Journal of Animal Sciences
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    • v.23 no.9
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    • pp.1137-1144
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    • 2010
  • In this study, to examine genetic variability within a breed and genetic relationships between populations/breeds, we genotyped 606 birds from seven Japanese native chicken breeds at seven polymorphic loci of egg white proteins and compared those with Asian native chicken populations and commercial breeds. Genotyping of the Japanese native breeds showed that ovalbumin, two ovoglobulins and ovotransferrin were polymorphic, but ovomacroglobulin, ovoflavoprotein and lysozyme were monomorphic. The proportion of polymorphic loci ($P_{poly}$) and average heterozygosity ($\bar{H}$) within a population ranged from 0.286 to 0.429 and from 0.085 to 0.158, respectively. The coefficient of gene differentiation ($G_{ST}$) was 0.250 in the Japanese native chicken breeds. This estimate was higher than that of Asian native chicken populations ($G_{ST}$ = 0.083) and of commercial breeds ($G_{ST}$ = 0.169). Dendrogram and PCA plot showed that Satsuma-dori, Jitokko, Amakusa-daio and Hinai-dori were closely related to each other and grouped into Asian native chickens and that Tsushima-jidori, Nagoya and Chan (Utaichan) were ramified far from other Japanese native chicken breeds. The egg white protein polymorphisms demonstrated that the population differentiation of the seven Japanese native chicken breeds was relatively large.

Complete mitochondrial genome sequence of Tosa-Jidori sheds light on the origin and evolution of Japanese native chickens

  • Osman, Sayed A.M.;Nishibori, Masahide;Yonezawa, Takahiro
    • Animal Bioscience
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    • v.34 no.6
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    • pp.941-948
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    • 2021
  • Objective: In Japan, approximately 50 breeds of indigenous domestic chicken, called Japanese native chickens (JNCs), have been developed. JNCs gradually became established based on three major original groups, "Jidori", "Shoukoku", and "Shamo". Tosa-Jidori is a breed of Jidori, and archival records as well as its morphologically primitive characters suggest an ancient origin. Although Jidori is thought to have been introduced from East Asia, a previous study based on mitochondrial D-loop sequences demonstrated that Tosa-Jidori belongs to haplogroup D, which is abundant in Southeast Asia but rare in other regions, and a Southeast Asian origin for Tosa-Jidori was therefore suggested. The relatively small size of the D-loop region offers limited resolution in comparison with mitogenome phylogeny. This study was conducted to determine the phylogenetic position of the Tosa-Jidori breed based on complete mitochondrial D-loop and mitogenome sequences, and to clarify its evolutionary relationships, possible maternal origin and routes of introduction into Japan. Methods: Maximum likelihood and parsimony trees were based on 133 chickens and consisted of 86 mitogenome sequences as well as 47 D-loop sequences. Results: This is the first report of the complete mitogenome not only for the Tosa-Jidori breed, but also for a member of one of the three major original groups of JNCs. Our phylogenetic analysis based on D-loop and mitogenome sequences suggests that Tosa-Jidori individuals characterized in this study belong to the haplogroup D as well as the sub-haplogroup E1. Conclusion: The sub-haplogroup E1 is relatively common in East Asia, and so although the Southeast Asian origin hypothesis cannot be rejected, East Asia is another possible origin of Tosa-Jidori. This study highlights the complicated origin and breeding history of Tosa-Jidori and other JNC breeds.

Mapping of Quantitative Trait Loci Affecting Growth Traits in a Japanese Native Chicken Cross

  • Rikimaru, K.;Sasaki, O.;Koizumi, N.;Komatsu, M.;Suzuki, K.;Takahashi, Hideaki
    • Asian-Australasian Journal of Animal Sciences
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    • v.24 no.10
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    • pp.1329-1334
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    • 2011
  • The Hinai-dori is a breed of chicken native to Akita Prefecture, Japan. An $F_2$ resource population produced by crossing low- and high-growth lines of the Hinai-dori breed was analyzed to detect quantitative trait loci (QTL) for growth traits. Highly significant QTLs for body weight at 10 and 14 weeks of age and average daily gain between 4 and 10 weeks and between 10 and 14 weeks of age were accordingly mapped in a common region between ADL0198 and ABR0287 on chromosome 1 and between MCW0240 and ABR0622 on chromosome 4, respectively. A significant QTL for body weight at 4 weeks of age and a significant QTL for average daily gain between 0 and 4 weeks of age were mapped for the first time to the same region flanking ABR0204 and ABR0284 on chromosome 1. These QTLs are good candidates for application in the development of marker-assisted selection strategies for increasing growth efficiencies in the Hinai-dori breed and native breeds of chickens in Asia.

Studies on the Performance of Korean Native Chickens I. Effect of Various Feeding Systems on Performance of Korean Native Chickens (한국재래닭의 능력에 관한 연구 I. 서로 다른 사료 급여가 한국재래닭의 능력에 미치는 영향)

  • 김상호;이상진;강보석;최철환;장병귀;오봉국
    • Korean Journal of Poultry Science
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    • v.25 no.4
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    • pp.169-175
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    • 1998
  • A feeding trial was carried out to evaluate optimum feeding system to Korean Native Chicken (KNC) with various feeding programs for 64 weeks. Eight hundreds and ten KNC'one day birds were assigned to three feeding systems, NRC(T1), Japanese Feeding Standard(T2), Korean Feeding Standard(T3). Each treatment had three replicates of 90 birds a replicate. Data were obtained growing performance to 20 week of age and laying performance from twenty one to sixty four week. Viability to 20 week of age was similar to treatments. Growth characteristics by feeding systems were not significantly difference on body weight, feed intake and 50% egg production days. However, body weight was less about 100g in T2. There were no different on egg production, egg weight, and egg mass during laying period. Feed intake of T1 was 104g daily and showed lower than other treatments, but was not different significantly. Feed conversion was significantly improved in T2(P <0.05) compared to other treatments(P<0.05). Egg production of all treatments was the highest between 27 to 30 week of age. ME intake of T1 was significantly maximized, whereas CP intake was the lowest of all treatments(P < 0.05). Nutrient requirements for egg mass tended to depend on nutrients intake. Interior egg and eggshell characteristics were not different among treatments except yolk color. Fertility and hatchability were similar to treatments, and the results at 39 week of age were higher than at 62 week in all treatments. In conclusion, treatments fed three or four phase feeding would be superior to other treatments during the growing period and suggest 2,800 ㎉/kg ME, 15% CP for Korean native laying hen.

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A Comparative Study on the Natural Monument Designations of South and North Korea (남.북한의 천연기념물 지정내용 비교)

  • Na, Moung-Ha;Hong, Youn-Soon;Kim, Hak-Berm
    • Journal of the Korean Institute of Landscape Architecture
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    • v.35 no.5
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    • pp.92-99
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    • 2007
  • Korea began preserving and managing natural monuments in 1933 under the Japanese Colonization, but South and North Korea had to establish natural monument management policies separately because of the division after the Korean Independence. The purpose of this study is to compare and analyze the natural monument designations of South and North Koreas between 1933 and 2005 to introduce advanced polices for Oneness-Korea. The following are the results: According to data of December 2005, South Korea has 358 and North Korea has 474 natural monuments. North Korea has 116 more natural monuments than South Korea. In addition, over half of South Korea's designations are plants, whereas North Korea's designations are relatively well-balanced. Both South and North Korea designate plants(mostly trees) that are old and large. However, South Korea emphasizes the historical value of village forests, contrary to economic value in North Korea. Also, North Korea preserves many traditional fruit trees which have not been well-preserved in South Korea. As for animals, South Korea designates migratory wild animals by type and not by region to protect them at a national level, whereas North Korea designates the specific habitats of each type of wild animal. In addition, North Korea protects each region's cattle and chickens to preserve native traits of domesticated animals. Geologically, North Korea preserves 18 hot springs and 11 springs, whereas South Korea has none. Geographically, North Korea preserves 81 waterfalls, lakes, etc. In the conclusion, advanced natural monument management of South and North Korea is necessary to achieve effective preservation of natural monuments.