• Title/Summary/Keyword: NPA

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Rapid Detection of Cochlodinium polykrikoides by Sandwich Hybridization Integrated with Invertase Assay (Invertase 분석이 통합된 sandwich hybridization에 의한 Cochlodinium polykrikoides의 신속 검출)

  • Kang, Mingyeong;Park, Mirye;Lee, Taek-Kyun
    • Journal of the Korea Academia-Industrial cooperation Society
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    • v.20 no.8
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    • pp.627-633
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    • 2019
  • Rapid and accurate identification of marine microalgae causing harmful algal blooms (HABs) is a crucial tool for predicting and managing HABs. We previously developed a nuclease protection assay sandwich hybridization (NPA-SH) method for the in situ detection of blooming microalgae Cochlodinium polykrikoides. In this study, we improved the applicability of the NPA-SH method for the detection of C. polykrikoides by simplifying the reaction step. For this purpose, invertase (INV) was conjugated to the signal probe instead of using fluorescence, and sucrose was used as a reactant to induce a color reaction. The INV-signal probe conjugation was confirmed by SDS-PAGE and epifluoromicroscopy. The treatment time and appropriate amounts of the probe and sucrose that optimized the reaction were determined. As a result, the developed INV-SH reduced the treatment time in the field compared with NPA-SH, and also enabled the use of a relatively small volume and low-priced personal glucose meter, as well as an absorbance meter. INV-SH is the first C. polykrikoides species identification technology to which INV has been applied and could be an improved field technique.

DEEP-South: The Photometric Study of Non-Principal Axis Rotator (5247) Krylov

  • Lee, Hee-Jae;Moon, Hong-Kyu;Kim, Myung-Jin;Kim, Chun-Hwey;Durech, Josef;Park, Jintae;Roh, Dong-Goo;Choi, Young-Jun;Yim, Hong-Suh;Oh, Young-Seok
    • The Bulletin of The Korean Astronomical Society
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    • v.41 no.2
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    • pp.49.2-49.2
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    • 2016
  • The number of discovery of asteroids with peculiar rotational states has recently increased, and hence a novel approach for lightcurve analysis is considered to be critical. In order to investigate objects such as Non-Principal Axis (NPA) rotator, we selected a NPA candidate, (5247) Kryolv as our target considering its Principal Axis Rotation (PAR) code and the visibility in early 2016. The observations of Krylov were made using Korea Microlensing Telescope Network (KMTNet) 1.6 m telescopes installed at the three southern sites with TO (Target of Opportunity) observation mode. We conducted R-band time-series photometry over a total of 51 nights from January to April 2016 with several exposures during each allocated run. The ensemble normalization photometry was employed using the AAVSO Photomtric All-Sky Survey (APASS) catalog for the standardization. We successfully confirmed its NPA spin state based on the deviation from the reduced lightcurve, and thus Krylov is recorded as the first NPA rotator of its kind in the main-belt, with its precession and rotation periods, $P{\varphi}=81.18h$ and $P_{\Psi}=67.17h$, respectively. In this paper, we present the spin direction, the 3D shape model and taxonomy of the newly confirmed NPA asteroid (5247) Krylov.

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DEEP-South: Photometric Study of NPA rotators 5247 Krolv and 14764 Kilauea

  • Lee, Hee-Jae;Kim, Myung-Jin;Moon, Hong-Kyu;Park, Jintae;Kim, Chun-Hwey;Choi, Young-Jun;Yim, Hong-Suh;Roh, Dong-Goo;Oh, Young-Seok
    • The Bulletin of The Korean Astronomical Society
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    • v.41 no.1
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    • pp.55.2-56
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    • 2016
  • The spin states of asteroids is regarded as an important clue to understand not only the physical property of an individual object but also the dynamical evolution of the of the population as a whole. Single asteroids can be broadly classified into two separate groups according to their rotational states; Principal Axis (PA) and Non-Principal Axis (NPA) rotators. To date, lightcurve observations have been carried out mostly for PA asteroids. However, discovery of NPA objects has recently been increased due to new observing techniques, and this is the reason why rotational properties of NPA rotators became an issue. As a DEEP-South pilot study for NPA, we selected two targets, 5247 Krolv (1982 UP6) and 14764 Kilauea (7072 P-L) considering their Principal Axis Rotation (PAR) code and visibility. Observations were made between Jan. and Feb. 2016 for 17 nights employing Korea Microlensing Telescope Network (KMTNet) 1.6 m telescopes installed at SSO and SAAO using DEEP-South TO (Target of Opportunity) mode. To obtain lightcurves, we conducted time-series photometry using Johnson-Cousins R-filter. Multi-band photometry was also made with BVRI filters at the same time, for taxonomy. Their preliminary lightcurves and approximate mineralogy will be presented.

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Three New Earthworms of the Genus Amynthas (Clitellata: Megascolecidae) from Nam Ha NPA, Laos

  • Hong, Yong;James, Samuel W.;Inkhavilay, Khamla
    • Animal Systematics, Evolution and Diversity
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    • v.30 no.2
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    • pp.81-86
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    • 2014
  • Three new species of Amynthas (Clitellata: Megascolecidae) were discovered in the Nam Ha National Protected Area (NPA) of Laos. These are Amynthas namhaensis sp. nov., Amynthas vanhi sp. nov., and Amynthas angtanensis sp. nov. Amynthas namhaensis sp. nov. and Amynthas vanhi sp. nov. are athecal, with male pores 0.14-0.17 and 0.17-0.19 circumference apart ventrally, respectively. Amynthas angtanensis sp. nov. has four pairs of spermathecal pores on 4/5-7/8, with male pores very closely set at 0.07-0.1 circumference apart. Descriptions of the new species are provided, including illustrations of the ventral view, intestinal caeca, and spermathecae.

Hydrolysis of p-Nitrophenyl Carboxylic Ester in N,N-Dimethyl-N-dodecyl-N-(2-methylbenzimidazoyl) Ammonium Chloride Micellar Solution (N,N-Dimethyl-N-Dodecyl-N-(2-methylbenzimidazoyl) Ammonium Chloride 미셀 용액속에서 p-Nitrophenyl Carboxylic Ester의 가수분해)

  • Kim, Jeung-Bea;Kim, Hak-Yoon
    • Journal of Environmental Science International
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    • v.17 no.5
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    • pp.509-516
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    • 2008
  • New functional surfactant, N,N-dimethyl-N-dodecyl-N-(2-methyl benzimidazoyl) ammonium chloride(DDBAC) having benzimidazole(BI) functional group have been synthesized and the critical micellar concentration of DDBAC measured by surface tentiometry and electric conductivity method was $8.9{\times}10^{-4}M$. Micellar effects in DDBAC functional surfactant solution on the hydrolysis of p-nitrophenylacetate(p-NPA), p-nitro-phenylpropionate(p-NPP) and p-nitrophenylvalerate(p-NPV) were observed with change of various pH (Tris-buffer). The pseudo first rate constants of hydrolysis of p-NPA, p-NPP and p-NPV in optimum concentration of DDBAC solution increase to about 160, 280 and 600 times, respectively, as compared with those of aqueous solution at pH 8.00(Tris-buffer). It is considered that benzimidazole functional moiety accelerates the reaction rates of hydrolysis because they act as nucleophile or general base. In optimum concentration of DDBAC solution, the rate constants of hydrolysis of p-NPP and p-NPV increase to about 1.5 and 3.0 times, respectively, as compared with that of p-NPA. It means that the more the carbon numbers of alkyl group of substrates, the larger the binding constants between DDBAC micelle and substrates are. To know the hydrolysis mechanism of p-NPCE(p-NPA, p-NPP and p-NPV), the deuterium kinetic isotope effects were measured in $D_2O$ solutions. Consequently the pseudo first order rate constant ratios in $H_2O$ and $D_2O$ solution, $k_{H_2O}/k_{D_2O}$, were about $2.8{\sim}3.0$ range. It means that the mechanism of hydrolysis were proceeded by nucleophile and general base attack in approximately same value.

A Series of Transition-metal Coordination Complexes Assembled from 3-Nitrophthalic Acid and Thiabendazole: Synthesis, Structure and Properties

  • Xu, Wen-Jia;Xue, Qi-Jun;Liang, Peng;Zhang, Ling-Yu;Huang, Yan-Feng;Feng, Yu
    • Bulletin of the Korean Chemical Society
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    • v.35 no.1
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    • pp.218-224
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    • 2014
  • In order to explore new coordination frameworks with novel designed 3-nitrophthalic acid and the same N-donor ancillary ligand, a series of novel coordination complexes, namely, $[Cd_2(3-NPA)_2(TBZ)_2(H_2O)_2]{\cdot}2H_2O$(1), $[Zn_2(3-NPA)_2(TBZ)_2]$(2), $[Zn_2O(3-NPA)(TBZ)(H_2O)]_n$(3), $[Co(3-NPA)(TBZ)(H_2O)]_n$(4) (3-$NPAH_2$ = 3-nitrophthalic acid), have been hydrothermally synthesized through the reaction of 3-nitrophthalic acid with divalent transition-metal salts in the presence of N-donor ancillary coligand (TBZ = thiabendazole). As a result of various coordination modes of the versatile 3-$NPAH_2$ and the coligand TBZ, these complexes exhibit structural diversity. X-ray structure analysis reveals that 1 and 2 are 0D molecular rings, while 3 and 4 are one-dimensional (1D) infinite chain polymers. And the weak O-H${\cdots}$O hydrogen bonds and C-H${\cdots}$O nonclassical hydrogen bonds as well as ${\pi}-{\pi}$ stacking also play important roles in affecting the final structure where complexes 1, 3 and 4 have 3D supramolecular architectures, while complex 2 has a 2D supramolecular network. Also, IR spectra, fluorescence properties and thermal decomposition process of complexes 1-4 were investigated.

Research on Visual Function Before and After Prescription of Vertical Prism (수직사위 교정 전·후 시기능 변화에 대한 연구)

  • Kim, So-ra;Lee, Gi-yung;Park, Hyun-ju
    • Journal of Korean Ophthalmic Optics Society
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    • v.20 no.2
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    • pp.229-235
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    • 2015
  • Purpose: This study was undertaken to study on visual function before and after prescription of vertical prism. Methods: 80 subjects (10-30ages) who had been precribed vertical prism and 1 year after they were represcribed vertical prism. Results: Phoria (p=0.000), supra vergence (p=0.000), NPC (p=0.003), NPA (right eye) (p=0.005), NPA(left eye) (p=0.000) showed a significant change. Conclusion: Vertical prism prescription was reduced during revisit. Supra vergence, NPC, NPA(right eye), NPA(left eye) showed a significant change. Binocular Accommodative lag was not associated with vertical prism prescription and binocular vision findings.

Characterization of a Paenibacillus woosongensis ${\beta}$-Xylosidase/${\alpha}$-Arabinofuranosidase Produced by Recombinant Escherichia coli

  • Kim, Yeon-A;Yoon, Ki-Hong
    • Journal of Microbiology and Biotechnology
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    • v.20 no.12
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    • pp.1711-1716
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    • 2010
  • A gene encoding the ${\beta}$-xylosidase/${\alpha}$-arabinofuranosidase (XylC) of Paenibacillus woosongensis was cloned into Escherichia coli. This xylC gene consisted of 1,425 nucleotides, encoding a polypeptide of 474 amino acid residues. The deduced amino acid sequence exhibited an 80% similarity with those of both Clostridium stercorarium ${\beta}$-xylosidase/${\alpha}$-N-arabinosidase and Bacillus cellulosilyticus ${\alpha}$-arabinofuranosidase, belonging to the glycosyl hydrolase family 43. The structural gene was subcloned with a C-terminal His-tag into a pET23a(+) expression vector. The His-tagged XylC, purified from a cell-free extract of a recombinant E. coli BL21(DE3) Codon Plus carrying a xylC gene by affinity chromatography, was active on para-nitrophenyl-${\alpha}$-arabinofuranoside (pNPA) as well as para-nitrophenyl-${\beta}$-xylopyranoside (pNPX). However, the enzymatic activities for the substrates were somewhat incongruously influenced by reaction pHs and temperatures. The enzyme was also affected by various chemicals at different levels. SDS (5 mM) inhibited the enzymatic activity for pNPX, while enhancing the enzymatic activity for pNPA. Enzyme activity was also found to be inhibited by addition of pentose or hexose. The Michaelis constant and maximum velocity of the purified enzyme were determined for hydrolysis of pNPX and pNPA, respectively.