• 제목/요약/키워드: Molecular structures

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Characterization of Peptide Deformylase2 from B. cereus

  • Park, Joon-Kyu;Kim, Kook-Han;Moon, Jin-Ho;Kim, Eunice Eun-Kyeong
    • BMB Reports
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    • 제40권6호
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    • pp.1050-1057
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    • 2007
  • Peptide deformylase (PDF) is a metalloenzyme that removes the N-terminal formyl groups from newly synthesized proteins. It is essential for bacterial survival, and is therefore-considered as a potential target for antimicrobial chemotherapy. However, some bacteria including medically relevant pathogens possess two or more def-like genes. Here we have examined two PDFs from Bacillus cereus. The two share only 32% sequence identity and the crystal structures show overall similarity with PDF2 having a longer C-terminus. However, there are differences at the two active sites, and these differences appear to contribute to the activity difference seen between the two. BcPDF2 is found as a dimer in the crystal form with two additional actinonin bound at that interface.

The role of lipid binding for the targeting of synaptic proteins into synaptic vesicles

  • Jang, Deok-Jin;Park, Soo-Won;Kaang, Bong-Kiun
    • BMB Reports
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    • 제42권1호
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    • pp.1-5
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    • 2009
  • Synaptic vesicles (SVs) are key structures for synaptic transmission in neurons. Numerous membrane-associated proteins are sorted from the Golgi complex to the axon and the presynaptic terminal. Protein-protein and protein-lipid interactions are involved with SV targeting in neurons. Interestingly, many SV proteins have lipid binding capability, primarily with either cholesterol or phosphoinositides (PIs). As examples, the major SV protein synaptophysin can bind to cholesterol, a major lipid component in SVs, while several other SV proteins, including synaptotagmin, can bind to PIs. Thus, lipid-protein binding plays a key role for the SV targeting of synaptic proteins. In addition, numerous SV proteins can be palmitoylated. Palmitoylation is thought to be another synaptic targeting signal. Here, we briefly describe the relationship between lipid binding and SV targeting.

Dual TORCs driven and B56 orchestrated signaling network guides eukaryotic cell migration

  • Kim, Lou W.
    • BMB Reports
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    • 제50권9호
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    • pp.437-444
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    • 2017
  • Different types of eukaryotic cells may adopt seemingly distinct modes of directional cell migration. However, several core aspects are regarded common whether the movement is either ameoboidal or mesenchymal. The region of cells facing the attractive signal is often termed leading edge where lamellipodial structures dominates and the other end of the cell called rear end is often mediating cytoskeletal F-actin contraction involving Myosin-II. Dynamic remodeling of cell-to-matrix adhesion involving integrin is also evident in many types of migrating cells. All these three aspects of cell migration are significantly affected by signaling networks of TorC2, TorC1, and PP2A/B56. Here we review the current views of the mechanistic understanding of these regulatory signaling networks and how these networks affect eukaryotic cell migration.

Virus-like Particles and Cellular Changes in Plants Infected with Sweetpotato Viruses

  • Sim, Jeong-Gu;Valverde, Rodrigo;Clark, Christopher;Chun, Se-Chul
    • The Plant Pathology Journal
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    • 제24권1호
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    • pp.36-45
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    • 2008
  • Studies with the transmission electron microscope were used to detect and attempt to identify viruses infecting sweetpotato (Ipomoea batatas) and other Ipomoea species. Flexuous-rods, short curved-rods, and spherical virus-like particles were observed in cells of symptomatic plants. Also, various cytopathic changes such as crystals, vesicles, fibril structures, and cylindrical inclusions were observed. The present study showed that some of these cytopathic changes were associated with some viral groups, which might be helpful in diagnosis.

Novel Linking Ligand Containing Sulfur-Donor Atoms and Its Compounds of Palladium and Silver

  • Lee, Hee-K.;Lee, Soon-W.
    • Bulletin of the Korean Chemical Society
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    • 제28권3호
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    • pp.421-426
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    • 2007
  • A linking ligand containing sulfur donor atoms in the terminal thiophene rings, 1,2-bis(thiophen-2-ylmethylene) hydrazine (L), was prepared by Schiff-base condensation. Ligand L reacted with [PdCl2(NCPh)2] to produce a molecular Pd compound [PdL2Cl2] (1). On the other hand, it reacted with AgNO3 and AgClO4 to produce a 2-D network [AgL0.5(NO3)] (2) and a 1-D polymer [AgL]ClO4 (3), respectively, whose structures are based on secondary intermolecular forces such as H-bonding, van der Waals interaction, and π-π stacking. Polymer 2 exhibited photoluminescence at room temperature in the solid state.

셀룰로오스 아세테이트 포장소재의 이용 및 고찰 (Review on Cellulose acetate as a Packaging Materials)

  • 이지윤;장시훈;박수일
    • 한국포장학회지
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    • 제16권1호
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    • pp.19-25
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    • 2010
  • It is becoming increasingly important to utilize alternative raw materials for plastic industries other than petrochemical-based plastics. Cellulose derivatives were the bases of the original synthetic plastics. Cellulose and its derivatives, especially the widely used cellulose acetate (CA), constitute one of the main classes of raw materials for production on artificial fibers, films, plastics etc. CA is one of the well known polymers produced from naturally available plant substance. Many researches have focused on the isolation of cellulose from the plant cells to use them as cellulose derivatives and composite materials. Chemical and mechanical treatments provide changes on the molecular structures influencing the fundamental properties of these naturally abundant polymer. The aim of this review article is to review biodegradation, synthesis, formation, and utilization of cellulose esters, especially di-acetate, used in packaging related researches.

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First Case of Canine Infection with Hepatozoon canis (Apicomplexa: Haemogregarinidae) in the Republic of Korea

  • Kwon, Seung-Joo;Kim, Yoon-Hee;Oh, Hyun-Hee;Choi, Ul-Soo
    • Parasites, Hosts and Diseases
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    • 제55권5호
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    • pp.561-564
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    • 2017
  • This report describes a dog infected with Hepatozoon canis, the first canine infection in the Republic of Korea. A 2-year-old intact male Maltese dog presented with anorexia and depression. Physical examinations revealed mild dehydration and hyperthermia ($39.8^{\circ}C$), and blood analysis showed pancytopenia. Diff-Quik staining of blood smear specimens showed the presence of ellipsoidal shaped structures (gamonts of H. canis) within a small number of neutrophils. Real-time PCR analysis using whole blood confirmed infection by H. canis. The clinical condition of the dog improved after symptomatic treatment and administration of doxycycline. Although a molecular epidemiologic survey in Korea showed H. canis infection of dogs, to our knowledge this is the first report of a dog infection in Korea molecularly shown to be H. canis.

Simultaneous Determination of Harman, Harmaline and Norharman by Synchronous Fluorescence

  • Karim Mohammad Mainul;Lee Sang-Hak
    • Journal of Photoscience
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    • 제12권3호
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    • pp.143-147
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    • 2005
  • The simultaneous determination of harman, harmaline and norharman has been described using synchronous fluorescence technique. The method has been based on their natural fluorescence. It is difficult to analyze and determine their contents by conventional fluorescence method because of their similar molecular structures. The synchronous spectrum, maintaining a constant wavelength difference of ${\Delta}{\lambda}=185nm$ between the excitation and emission monochromators, was selected as optimum to perform the determination. The method was also performed in aqueous medium at pH 4.0 and in presence of sodium dodecyl sulfate (SDS), $1{\times}10^{-5}M$. Under the optimum conditions, each analyte has the linear determination range of $1{\times}10^{-7}M-\;1{\times}10^{-4}M$.

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Correlation between Magnetic-field directions and intensity gradients in Orion A region

  • Hwang, Jihye;Kim, Jongsoo
    • 천문학회보
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    • 제43권1호
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    • pp.67.2-67.2
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    • 2018
  • Magnetic fields play an important role in star-forming processes by regulating gravitational collapse. In filamentary structures of star-forming regions, magnetic fields are likely to be aligned with minor axes of filamentary molecular clouds because matter freely moves along magnetic field lines. Orion A region, one of the well-known high-mass star forming regions, has long filament structure. In order to study magnetic field directions with respect to the filamentary structure in Orion A, we have analyzed $850{\mu}m$ dust polarization observations obtained with the James Clerk Maxwell Telescope (JCMT). We found tight correlation of dust intensity gradients and magnetic field directions. It was estimated that 81% of magnetic field segments are aligned with density gradients within 40 degree. In conclusion, we confirmed most of magnetic field segments are perpendicular to the major axis of the filament in Orion A.

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Substituted Benzothiazolyl Urea 유도체의 합성 및 항균작용에 관한 연구 (Studies on the Syntheses and Antimicrobial Activity of Substituted Benzothiazolyl Urea Derivatives)

  • 강회양
    • 한국환경보건학회지
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    • 제7권2호
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    • pp.113-117
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    • 1981
  • Twelve benzothiazolyl and 6-substituted benzothiazoly phenyl and chlorophenyl ureas have been newly synthesized by reacting 2-amino benzothiazole and 2-amino-6-substituted benzothazole with three or four phenyl and chlorophenyl isocyanate, respectively. The structures of these compounds were determined by measurement of the molecular weights and elementary analysis as well as IR spectrophotometry. The compounds generally exhibited antibacterial activity against Staphylococcus aureus and Escherichia coli in the concentration of $50\mu g/ml$. The compounds containing chloro group exhibited stronger antibacterial activity than those containing methyl group against Eschichia coli. The difference in the antibacterial activity according to the substituted group (phenyl, o-, m-, and p-chlorophenyl) was also noted. The compounds containing o-chlorophenyl group, on the whole, exhibited more potent growth-inhibitory activity againsts staphylococcus aureus.

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