• Title/Summary/Keyword: Molecular Simulation

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Molecular Dynamics Simulations on the Mechanical Behavior of Carbon Nanotube (탄소나노튜브의 역학적 거동에 관한 분자동역학 전산모사)

  • Park, Jong-Youn;Lee, Young-Min;Jun, Suk-Ky;Kim, Sung-Youb;Im, Se-Young
    • Proceedings of the KSME Conference
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    • 2003.04a
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    • pp.1083-1088
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    • 2003
  • Molecular dynamics simulations on the deformation behavior of single-walled carbon nanotube are performed. Formation energies of CNT's by interatomic potentials are computed and compared with ab initio results. Bending and axial compression are applied under lattice statics and NVT ensemble conditions. Specifically, we focus on the mechanism of kink formation in bending. The simulation results are comprehensively explained in the framework of atomistic energetics. The effects of temperature and chirality on the deformation of carbon nanotube are also studied.

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Influence of Polycondensation Type on Structure of Resorcinol Formaldehyde Resin Studied by Molecular Simulation

  • Park, Sung-Seen
    • Macromolecular Research
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    • v.8 no.3
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    • pp.125-130
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    • 2000
  • Resorcinol formaldehyde resins are synthesized by polycondensation of resorcinol with formal-dehyde and have various structures by the condensation type. The influence of polycondensation type on the stability and structure of the resorcinol formaldehyde resin was studied by molecular mechanics and molecular dynamics. The resins formed by 2,6-polycondensation and 4,6-polycondensationwith head-to-tail orientations have structures of intramolecular hydrogen bonds between 1-hydroxyl groups and between outer hydroxyl groups of the adjacent resorcinols, respectively. The resin formed by 2,6-polycon-densation with head-to-head orientation has a structure that inner hydroxyl groups cluster in the center of the molecule. Energetical stability of the resin is affected by both the intramolecular hydrogen bonds and the steric' hindrance by phenyl group.

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SIMULATION OF THIN-FILM FIELD EMITTER TRIODE

  • Park, Kyung-Ho;Lee, Soon-Il;Koh, Ken-Ha
    • 한국정보디스플레이학회:학술대회논문집
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    • 2002.08a
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    • pp.651-654
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    • 2002
  • We carried out 2-dimensional numerical calculations of electrostatic potential for triode field emitters with planar cathodes using the finite element method. As it turned out, the conventional triode structure with a planar cathode suffered from large gate current and wide spreading of emitted electrons. To circumvent these shortcomings, we proposed a new triode structure. By simply inserting a conducting layer of proper thickness on top of the cathode layer, we were able to modify the electric field distribution on the cathode surface so that low gate current and electron-focusing effect were achieved, simultaneously.

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PDF properties of ISM turbulence

  • Jo, Hyeon-Jin;Gang, Hye-Seong;Ryu, Dong-Su;Kim, Jong-Su;Jo, Jeong-Yeon
    • The Bulletin of The Korean Astronomical Society
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    • v.36 no.2
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    • pp.107.1-107.1
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    • 2011
  • Density Probability Distribution Functions (PDFs) are a classic statistical way to study properties of Interstellar Medium (ISM) turbulence. In our three-dimensional MHD simulations, density PDFs of the position-position velocity (PPV) spaces are close to a log-normal distribution. the PDF widths depend on the plasma parameters such as magnetic strength and sonic Mach number. Futhermore, we compare these simulations results to Galactic molecular clouds observed by Jackson et. al (2006). By fitting of the velocity dispersion in the spectral line observation, volume density PDFs of the defined molecular clouds indicate that the sound speeds of the turbulences seem to have a few times larger than the simulation results. In order to understand the inconsistency with general characteristics of turbulence, we consider other simulations inducing the turbulent flow randomly at small driving scales. We find that the density PDF width decreases at more smaller driving scale. Finally, the simulations suggest that sources of ISM turbulence in Galactic molecular clouds can be important on small scales.

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Study on the Melting Point of Ar by Molecular Dynamic Simulation (Ar의 녹는점에 관한 분자동역학적 고찰)

  • Chung, Jae-Dong
    • Korean Journal of Air-Conditioning and Refrigeration Engineering
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    • v.19 no.12
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    • pp.883-888
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    • 2007
  • As a starting point of investigating what molecular dynamic simulations can reveal about the nature of atomic level of heating and cooling process, argon described by the LJ potential is considered. Stepwise heating and cooling of constant rates are simulated in the NPT (constant number, pressure and temperature) ensemble. Hysteresis is found due to the superheating and supercooling. Drastic change of volume and energy is involved with phase change, but the melting point can not be obtained by simply observing the changes of these quantities. Since liquid and solid phases can co-exist at the same temperature, Gibbs free energy should be calculated to find the temperature where the Gibbs free energy of liquid is equal to that of the solid since the equilibrium state is the state of minimum Gibbs free energy. The obtained melting temperature, $T^*=0.685$, is close to that of the experiment with only 2% error.

Temperature Dependency on Conformational Sampling of 12-Crown-4 by Simulated Annealing

  • Gadhe, Changdev G.;Cho, Seung Joo
    • Journal of Integrative Natural Science
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    • v.6 no.1
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    • pp.8-11
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    • 2013
  • In this manuscript, we report a protocol to determine most of the lowest energy conformations from the ensemble of conformations. 12-crown-4 was taken as study compound to get the most of energy minima conformations. Molecular dynamic (MD) simulation for 1 nanosecond (ns) was performed at 300, 500, 700, 900 and 1100 K temperature. At particular interval conformations were sampled. Then Gaussian program was used to minimize compounds using PM6 energy levels. Duplicates were removed by checking energy as well as mirror image conformations, and only unique conformations were retained for the next $6-31+G^*$ level minimization. It was observed that upto certain increment in temperature the number of unique conformations were increased, but afterword it decreased.

Local Structure Invariant Potential for InxGa1-xAs Semiconductor Alloys

  • Sim, Eun-Ji;Han, Min-Woo;Beckers, Joost;De Leeuw, Simon
    • Bulletin of the Korean Chemical Society
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    • v.30 no.4
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    • pp.857-862
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    • 2009
  • We model lattice-mismatched group III-V semiconductor $In_{x}Ga_{1-x}$ alloys with the three-parameter anharmonic Kirkwood-Keating potential, which includes realistic distortion effect by introducing anharmonicity. Although the potential parameters were determined based on optical properties of the binary parent alloys InAs and GaAs, simulated dielectric functions, reflectance, and Raman spectra of alloys agree excellently with experimental data for any arbitrary atomic composition. For a wide range of atomic composition, InAs- and GaAs-bond retain their respective properties of binary parent crystals despite lattice and charge mismatch. It implies that use of the anharmonic Kirkwood-Keating potential may provide an optimal model system to investigate diverse and unique optical properties of quantum dot heterostructures by circumventing potential parameter searches for particular local structures.

Investigations on the Chain Conformation of Weakly Charged Polyelectrolyte in Solvents by Using Efficient Hybrid Molecular Simulations

  • Chun, Myung-Suk;Lee, Hyun-Su
    • Macromolecular Research
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    • v.10 no.6
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    • pp.297-303
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    • 2002
  • We have investigated the microstructural properties of a weakly charged polyelectrolyte modeled with both Hookean spring and Debye-Huckel potential, by employing a novel hybrid scheme of molecular dynamics (MD) and Monte Carlo (MC) simulations. Although the off-lattice pivot step facilitates the earlier computations stage, it gives rise to oscillations and hinders the stable equilibrium state. In order to overcome this problem, we adopt the MC off-lattice pivot step in early stage only, and then switch the computation to a pure MD step. The result shows that the computational speed-up compared to the previous method is entirely above 10 to 50, without loss of the accuracy. We examined the conformations of polyelectrolyte in solvents in terms of the end-to-end distance, radius of gyration, and structure factor with variations of the screening effects of solvent and the monomer charges. The emphasis can favorably be given on the elongation behavior of a polyelectrolyte chain, with observing the simultaneous snapshots.

Molecular Dynamics Simulation for Bilayers of Alkyl Thiol Molecules at Solid-Solid Interfaces

  • 이송희;김한수;박형숙
    • Bulletin of the Korean Chemical Society
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    • v.19 no.10
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    • pp.1047-1054
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    • 1998
  • We present the results of molecular dynamics simulations for three different systems of bilayers of long-chain alkyl thiol [S(CH2)15CH3] molecules on an solid-solid interface using the extended collapsed atom model for the chain-molecule. It is found that there exist two possible transitions: a continuous transition characterized by a change in molecular interaction between sites of different chain molecules with increasing area per molecule and a sudden transition from an ordered lattice-like state to a liquid-like state due to the lack of interactions between sites of chain molecules on different surfaces with increasing distance between two solid surfaces. The third system displays a smooth change in probability distribution characterized by the increment of gauche structure in the near-tail part of the chain with increasing area per molecule. The analyses of energetic results and chain conformation results demonstrate the characteristic change of chain structure of each system.

Point defects and grain boundary effects on tensile strength of 3C-SiC studied by molecular dynamics simulations

  • Li, Yingying;Li, Yan;Xiao, Wei
    • Nuclear Engineering and Technology
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    • v.51 no.3
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    • pp.769-775
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    • 2019
  • The tensile strength of irradiated 3C-SiC, SiC with artificial point defects, SiC with symmetric tilt grain boundaries (GBs), irradiated SiC with GBs are investigated using molecular dynamics simulations at 300 K. For an irradiated SiC sample, the tensile strength decreases with the increase of irradiation dose. The Young's modulus decreases with the increase of irradiation dose which agrees well with experiment and simulation data. For artificial point defects, the designed point defects dramatically decrease the tensile strength of SiC at low concentration. Among the point defects studied in this work, the vacancies drop the strength the most seriously. SiC symmetric tilt GBs decrease the tensile strength of pure SiC. Under irradiated condition, the tensile strengths of all SiC samples with grain boundaries decrease and converge to certain value because the structures become amorphous and the grain boundaries disappear after high dose irradiation.