• Title/Summary/Keyword: Microbial isolation

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Isolation of Antimicrobial Active Substance from Aristolochia tagala Champ. against Sclerotial Rot (Sclerotinia sclerotiorum) (이엽마두령(Aristolochia tagala Champ.)추출물로부터 균핵병 병원균(Sclerotinia sclerotiorum)에 대한 항균 활성물질 탐색)

  • Kim, Hyun-Sang;Shon, Jinhan;Choi, Yong-Hwa
    • Korean Journal of Organic Agriculture
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    • v.23 no.4
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    • pp.951-962
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    • 2015
  • To develop environment-friendly agricultural products with anti-microbial activity against Sclerotinia sclerotiorum as a pathogen of sclerotium disease, Aristolochia tagala Champ. was extracted by methanol and its extract was fractionated into several solvent fractions. The chloroform fraction, which showed the highest antimicrobial activity, was separated by column chromatography and obtained forty three subfractions. The forty three fractions were searched the anti-fungal activities by bioassay. The most active No. 26 subfraction was analyzed by GC-MS. Each mass spectra, corresponding to each peak of chromatogram, was compared to MS database of Wiley library. As a result, 2,4-di-tetra-butyl-phenol, 2-mono-palmitin, 1-mono-stearin were profiled as maine compounds in No. 26 subfraction. Bioassay using commercial 1-mono-stearin to test for the anti-microbial activity conformed the antimicrobial active compound. In conclusion, 1-mono-stearin identified from Aristolochia tagala Champ. was antimicrobial chemical against Sclerotinia sclerotiorum.

Isolation and Characterization of Thermophilic Bacteria for Aerobic Decomposition of Food Waste (음식물 쓰레기의 호기성분해를 위한 고온균의 분리 및 생육 특성)

  • Choi, Min Ho;Cho, Sung Eun;Yoo, Jung Mok;Chung, Yoon Jin;Park, Yun Hee
    • Journal of the Korea Organic Resources Recycling Association
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    • v.3 no.1
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    • pp.21-34
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    • 1995
  • For development of microbial additives applicable to in-vessel composting system of food waste, thermophilic bacteria which showed amylase, protease, lipase and cellulase activity were isolated from soil, compost and food waste. Among 81 isolates, the growth characteristic of 20 strains with high enzyme activity were examined. All strains are Gram positive rod with catalase activity and 17 strains are spore formers. At $50^{\circ}C$, most of the strains were able to grow from pH 5 to pH 10 and in presence of 8% of NaCl. In trypticase soy broth, the growth of these strains was greatly increased by aeration, but decreased at elevated temperature above $50^{\circ}C$.

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Microbial Distribution as an Environmental Factor for the Conservation of Cultural Properties in the War Memorial in Korea (전쟁기념관내 문화재 보존을 위한 환경요인으로서의 미생물의 분포)

  • Choi, Yoon Jeong;Lim, Sun Ki;Min, Kyung Hee
    • Journal of Conservation Science
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    • v.7 no.1
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    • pp.31-41
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    • 1998
  • Two isolation methods using the open plate and air sampler were applied to examine microbial distribution as an environmental factor for conservation of cultural properties in the War Memorial in Korea. The numbers of fungi were the abundant in the air of entrance and inside of the exhibition room where visitors were crowded, compared with inside of repository rooms. Fungal and bacterial distributions in the exhibition room during exhibition period were higher than during nonexhibition period, These results are due to the inflow of air current carrying microoganisms to the exibition rooms from outside with visitors. Fungi isolated from the War Memorial were identified as 19 species and one thermophilic fungus, Neurospora crassa. The majority of the isolated fungi are seemed to cause damage to cellulose materials in the Memorial.

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Microbial degradation of the persistent pollutant TCAB : (I) Isolation and identification of the TCAB-degrading microorganisms (난분해성(難分解性) 공해물질(公害物質) TCAB의 미생물(微生物)에 의(依)한 분해(分解) : (I) TCAB 분해균(分解菌)의 분리(分離) 및 동정(同定))

  • Lee, Jae-Koo;Ihm, Yang-Bin;Cho, Yong-Gyun;Kyung, Kee-Sung;Oh, Kyeong-Seok;Kim, Hak-Nam
    • Applied Biological Chemistry
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    • v.34 no.3
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    • pp.279-286
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    • 1991
  • In order to investigate the possibility of the microbial degradation of the persistent pollutant 3, 3', 4, 4'-tetrachloroazobenzene (TCAB) in our environment, four strains of microorganisms were isolated from industrial wastes by the enrichment technique. They were identified as Achromobacter group VD, Pseudomonas alcaligenes, Moraxella spp., and Alcaligenes faecalis, respectively. These microorganisms utilized TCAB as a sole carbon source in the $MM_2$ salt medium.

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Isolation and Characterization of a Rhodococcus Species Strain Able to Grow on ortho- and para-Xylene

  • Jang Jung Yeon;Kim Dockyu;Bae Hyun Won;Choi Ki Young;Chae Jong-Chan;Zylstra Gerben J.;Kim Young Min;Kim Eungbin
    • Journal of Microbiology
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    • v.43 no.4
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    • pp.325-330
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    • 2005
  • Rhodococcus sp. strain YU6 was isolated from soil for the ability to grow on o-xylene as the sole carbon and energy source. Unlike most other o-xylene-degrading bacteria, YU6 is able to grow on p-xylene. Numerous growth substrate range experiments, in addition to the ring-cleavage enzyme assay data, suggest that YU6 initially metabolizes 0- and p-xylene by direct aromatic ring oxidation. This leads to the formation of dimethylcatechols, which was further degraded largely through meta-cleavage path-way. The gene encoding meta-cleavage dioxygenase enzyme was PCR cloned from genomic YU6 DNA using previously known gene sequence data from the o-xylene-degrading Rhodococcus sp. strain DK17. Subsequent sequencing of the 918-bp PCR product revealed a $98\%$ identity to the gene, encoding meth-ylcatechol 2,3-dioxygenase from DK17. PFGE analysis followed by Southern hybridization with the catechol 2,3-dioxygenase gene demonstrated that the gene is located on an approximately 560-kb megaplasmid, designated pJY J1

Reduction of Dissolved Fe(III) by As(V)-tolerant Bacteria Isolated from Rhizosphere Soil

  • Khanal, Anamika;Song, Yoonjin;Cho, Ahyeon;Lee, Ji-Hoon
    • Korean Journal of Environmental Agriculture
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    • v.40 no.1
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    • pp.67-72
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    • 2021
  • BACKGROUND: Biological iron redox transformation alters iron minerals, which may act as effective adsorbents for arsenate [As(V)] in the environments. In the viewpoint of alleviating arsenate, microbial Fe(III) reduction was sought under high concentration of As(V). In this study, Fe(III)-reducing bacteria were isolated from the wild plant rhizosphere soils collected at abandoned mine areas, which showed tolerance to high concentration of As(V), in pursuit of potential agents for As(V) bioremediation. METHODS AND RESULTS: Bacterial isolation was performed by a series of enrichment, transfer, and dilutions. Among the isolated strains, two strains (JSAR-1 and JSAR-3) with abilities of tolerance to 10 mM As(V) and Fe(III) reduction were selected. Phylogenetic analysis using 16S rRNA genesequences indicated the closest members of Pseudomonas stutzeri DSM 5190 and Paenibacillus selenii W126, respectively for JSAR-1 and JSAR-3. Ferric and ferrous iron concentrations were measured by ferrozine assay, and arsenic concentration was analyzed by ICP-AES, suggesting inability of As(V) reduction whereas ability of Fe(III) reduction. CONCLUSION: Fe(III)-reducing bacteria isolated from the enrichments with arsenate and ferric iron were found to be resistant to a high concentration of As(III) at 10 mM. We suppose that those kinds of microorganisms may suggest good application potentials for As(V) bioremediation, since the bacteria can transform Fe while surviving under As-contaminated environments. The isolated Fe(III)-reducing bacterial strains could contribute to transformations of iron minerals which may act as effective adsorbents for arsenate, and therefore contribute to As(V) immobilization

Isolation of Microorganisms for Optimization of Autonomous Crack Healing and Verification of Crack Healing (자발적 균열치유작용 최적화를 위한 미생물군 분리 및 균열치유작용 검증)

  • Byung-Jae Lee;Yeon-Jun Yu;Hyo-Sub Lee;Joo-Kyoung Yang;Yun Lee
    • Journal of the Korea institute for structural maintenance and inspection
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    • v.27 no.1
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    • pp.103-108
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    • 2023
  • In this study, basic research was conducted to secure microbial resources applicable to autonomous crack healing concrete. To this end, in this experiment, biomineral-forming microorganisms were separated from natural sources, and the ability of survival in cement and calcium carbonate precipitation were compared to secure suitable microbial resources. Bacillus-type bacteria forming endospores were isolated from the sample, and the amount of calcium carbonate produced by the six microorganisms identified by 16S rRNA sequencing was compared. Two types of microorganisms, Bacillus velezensis and Bacillus subtilis, with the highest calcium carbonate precipitation were selected, and the survival of the microorganisms was confirmed through phase contrast microscopy after being cured after being added to the mortar. In addition, it was confirmed that the autonomous crack healing capability by the crack healing material produced by microorganisms was confirmed by artificially generating cracks in the mortar.

Rapid Isolation of Cyanidin 3-Glucoside and Peonidin 3-Glucoside from Black Rice (Oryza sativa) Using High-Performance Countercurrent Chromatography and Reversed-Phase Column Chromatography

  • Jeon, Heejin;Choi, Janggyoo;Choi, Soo-Jung;Lee, Chang Uk;Yoon, Shin Hee;Kim, Jinwoong;Yoon, Kee Dong
    • Natural Product Sciences
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    • v.21 no.1
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    • pp.30-33
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    • 2015
  • Anthocyanins are water soluble plant pigments which are responsible for the blue, red, pink, violet colors in several plant organs such as flowers, fruits, leaves and roots. In recent years, anthocyanin-rich foods have been favored as dietary supplements and health care products due to diverse biological activities of anthocyanins including antioxidant, anti-allergic, anti-diabetic, anti-microbial, anti-cancer and preventing cardiovascular disease. High-performance countercurrent chromatography (HPCCC) coupled with reversed-phase medium pressure liquid chromatography (RP MPLC) method was applied for the rapid and efficient isolation of cyanidin 3-glucoside (C3G) and peonidin 3-glucoside (P3G) from black rice (Oryza sativa L., Poaceae). The crude black rice extract (500 mg) was subjected to HPCCC using two-phase solvent system composed of tert-butyl methyl ether/n-butanol/ acetonitrile/0.01% trifluoroacetic acid (TBME/B/A/0.01% TFA, 1 : 3 : 1 : 5, v/v, flow rate - 4.5 mL/min, reversed phase mode) to give enriched anthocyanin extract (37.4 mg), and enriched anthocyanin extract was sequentially chromatographed on RP-MPLC to yield C3G (16.5 mg) and P3G (8.7 mg). The recovery rate and purity of isolated C3G were 76.0% and 98.2%, respectively, and those of P3G were 58.3% and 96.3%, respectively. The present study indicates that HPCCC coupled with RP-MPLC method is more rapid and efficient than multi-step conventional column chromatography for the separation of anthocyanins.

Study on the Microbial Degradation of Nicotine (1) -Isolation and Identification of Nicotinophiles (미생물에 의한 니코틴 분해 연구(1) -니코틴 분해세균의 분리 및 동정)

  • 강은희;윤경하
    • Journal of the Korean Society of Tobacco Science
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    • v.2 no.1
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    • pp.17-27
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    • 1980
  • From 143 sources of collected samples, the distribution of nicotinophiles were investigated and the biological characteristics as well as the rate of nicotine degradation were determined for the selected 34 strains which could grow successfully in the nicotine media, and one of the most effective strains was chosen and identified at the species level. Nicotinophils were distributed abundantly in the soils rich with organic materials, tobacco seed and root. The selected 34 strains were classified into 7 genus and identified with 4 strains of Arthrobacter, 11 strains of non-pigmented Pseudomonas, 2 strains of pigmented Pseudomonas, 6 strains of Alkaligenes, 5 strains Chromobacter 2 strains of Listeria and 4 strains of Achromobacter. Pseeudomonas and Alkaligenes were better than other genus in the rate of nicotine degradation and tobacco seed and root were also good sources for the isolation of effective nicotinophiles. Amnog 34 strains, strain NCT 27 which exhibited 97.l% of nicotine degradation rate was the best one for nicotine degradation and was indentified with Pseudomonas putida.

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Practical Application of Defaunation of Cattle on Farms in Vietnam: Response of Young Cattle Fed Rice Straw and Grass to a Single Drench of Groundnut Oil

  • Nguyen, Thi Hong Nhan;Nguyen, Van Hon;Nguyen, Trong Ngu;Nguyen, Tien Von;Preston, T.R.;Leng, R.A.
    • Asian-Australasian Journal of Animal Sciences
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    • v.14 no.4
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    • pp.485-490
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    • 2001
  • Farmers in the centre of Vietnam have a tradition of dosing young cattle with groundnut oil before fattening them on a diet of rice straw and road-side grass. These farmers claim the cattle grow faster. It was hypothesized that the effect of the oil could be to eliminate the protozoa from the rumen. This is known to increase the net microbial growth efficiency in the rumen and increase the protein supply to the animal. To test this hypothesis, two experiments were undertaken; one on-station with four cattle fitted with rumen cannulae and the second a growth trial with 25 young cattle in smallholder farms. When the cannulated animals were drenched with groundnut oil, the protozoa were eliminated from the rumen and animals could be kept free of protozoa by isolation. The ammonia concentration in the rumen fluid was decreased when the protozoa were eliminated and there was an indication of improved rumen dry matter degradability of the forage components of the diet. In the practical condition on the smallholder farms, the growth rates of cattle drenched with groundnut oil were increased considerably (65%) compared with untreated control animals. The laboratory results when taken together with the on-farm results indicate that these resource-poor farmers had been able to defaunate their cattle and to maintain the fauna-free state by isolation of their animals from extraneous stock. This traditional practice in Central Vietnam, whereby one family keeps only one or two animals that are hand fed and tethered, has quite a large potential for all of those countries where animals are fed agro-industrial by-products, as it is highly economic. The use of 1 litre of oil compared with 1 kg of rice polishing per day (300 kg over 300 days), would be highly profitable in all countries of South-East Asia.