• Korean Journal of Environmental Biology
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• v.30 no.2
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• pp.143-150
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• 2012

To determine the spatial distribution of marine invertebrate communities in intertidal rocky shore on Dokdo, 10 times investigation was carried out at 7 stations during the year of 2009~2011. The marine invertebrate community can be divided into three different groups based on cluster analysis of Bray-Curtis similarity. As a first group, the pebble beach community, Omphalius rusticus, Monodonta perplexa, and Chlorostoma lischkei which were movable gastropod with dominant occurrence. Secondly, the still rocky shore community, O. rusticus, Serpulorbis imbricatus and Aplysia kurodai occurred dominantly. Finally, the wave-exposed rocky shore community which dominantly occurred by two sessile arthropods, Barnacles, Chthamalus challengeri and Pollicipes mitella. The three groups were likely to be determined by texture of substrate and hydrodynamic conditions of rocky shore in Dokdo. The results indicated that diversity of marine intertidal invertebrate community around Dok do was mainly affected by habitat characteristics and the surrounding physical properties.

• Fisheries and Aquatic Sciences
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• v.10 no.1
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• pp.16-23
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• 2007

Myostatin (GDF8) is a growth factor that limits muscle tissue growth and development in vertebrates. We isolated a myostatin-like gene (Py-MSTN) from the marine invertebrate, the scallop Patinopecten yessoensis. Py-MSTN was highly expressed in the adductor muscle and in the gill unexpectedly. Amino acid analysis showed that Py-MSTN has 49% amino acid sequence identity and 64% similarity to human myostatin (Hs-MSTN), and 42% identity and 61% similarity to myoglianin, the only invertebrate homolog. These results indicated that Py-MSTN may be functionally similar to the vertebrate MSTN than the invertebrate homolog. Phylogenetic analysis suggested that Py-MSTN is an ancestral form of vertebrate MSTN and GDF11 and does not belong to other $TGF-{\beta}$ family members. Molecular modeling showed that Py-MSTN exhibits a similar tertiary structure to mammalian BMP7, a member of $TGF-{\beta}$ family. In addition, the amino acid residues which contact extracellular domain of the receptor were relavively conserved. Given these results, we propose that Py-MSTN is a functionally active member of the $TGF-{\beta}$ family and is involved In muscle growth and regulation.

• Korean Journal of Environmental Biology
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• v.40 no.1
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• pp.87-98
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• 2022

In this study, the community structure of marine benthic invertebrates was examined to evaluate the differences between the west, south, and east coasts of Korea and to identify the indicator species representing each region. Acrylic attachment plate sets were installed in Jeongok, Mokpo, Tongyeong, Yangpo, and Gangreung, and the invertebrate fauna thus captured were identified. Monitoring was performed in each area from March 2017 to May 2018. Water depth, temperature, and salinity at each location were measured to determine the potential influence of abiotic factors on the community structure. As a result, the mean depth of plates installed and the water temperature were significantly different in each area. A total of 32 invertebrate species were identified in all localities, and the most significant difference in the species compositions was found between Mokpo and Gangreung. The community structure differed significantly with a change in the plate depth, and a larger number of indicator species appeared on shallower plates. Finally, we determined the community structure of benthic invertebrates in different geographical regions of the Korean ocean by characterizing the dominant invertebrate taxa and the indicator species at each site.

• Fisheries and Aquatic Sciences
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• v.20 no.11
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• pp.28.1-28.17
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• 2017

Members of the phylum Echinodermata, commonly known as echinoderms, are exclusively marine invertebrates. Among the Echinodermata, sea cucumber belongs to the family Holothuroidea. The sea cucumber Stichopus (Apostichous) japonicus (Selenka) is an invertebrate animal inhabiting the coastal sea around Korean, Japan, China, and Russia. Sea cucumber has a significant commercial value, because it contains valuable nutrients such as vitamins and minerals. They possess a number of distinctive biologically and pharmacologically important compounds. In particular, the body wall of sea cucumber is a major edible part. It consists of peptide, collagen, gelatin, polysaccharide, and saponin, which possess several biological activities such as anti-cancer, anti-coagulation, anti-oxidation, and anti-osteoclastogenesis. Furthermore, the regenerative capacity of sea cucumber makes it a medically important organism. This review presents the various biological activities and biomedical potential of sea cucumber S. japonicus.

• Fisheries and Aquatic Sciences
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• v.12 no.2
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• pp.138-151
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• 2009

We quantitatively investigated compositions of fish and invertebrate bycatch in Korean shrimp fisheries. We sampled shrimp trawl bycatch from 48 commercial trawls over 1 year. These samples contained 108 taxa from 50 families, with 60 fish taxa contributing 51.2% of the total biomass and 48 invertebrate taxa 48.8%. However, 86.32% of the total individual organism density comprised invertebrates, while individual fishes made up the remainder. Within the bycatch, two fish species varied in population size structure by season, suggesting recruitment is seasonal in these taxa. Overall general catch characteristics (total bycatch biomass and organism density) varied significantly by season and tide, and a significant interaction effect was observed (season$\times$tide) on total density, but not on total biomass. The data collected will be used in designing a program of long-term bycatch monitoring.

• Korean Journal of Remote Sensing
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• v.39 no.5_3
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• pp.909-919
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• 2023

Benthic marine invertebrates, the invertebrates living on the bottom of the ocean, are an essential component of the marine ecosystem, but excessive reproduction of invertebrate grazers or pirate creatures can cause damage to the coastal fishery ecosystem. In this study, we compared and evaluated You Only Look Once Version 7 (YOLOv7), the most widely used deep learning model for real-time object detection, and detection tansformer (DETR), a transformer-based model, using underwater images for benthic marine invertebratesin the coasts of South Korea. YOLOv7 showed a mean average precision at 0.5 (mAP@0.5) of 0.899, and DETR showed an mAP@0.5 of 0.862, which implies that YOLOv7 is more appropriate for object detection of various sizes. This is because YOLOv7 generates the bounding boxes at multiple scales that can help detect small objects. Both models had a processing speed of more than 30 frames persecond (FPS),so it is expected that real-time object detection from the images provided by divers and underwater drones will be possible. The proposed method can be used to prevent and restore damage to coastal fisheries ecosystems, such as rescuing invertebrate grazers and creating sea forests to prevent ocean desertification.

• Animal Systematics, Evolution and Diversity
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• v.26 no.1
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• pp.29-33
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• 2010

The genus Caconemobius comprises marine apterous crickets. In recent years, two species have been confirmed in Korea: Caconemobius sazanami (Furukawa, 1970) and Caconemobius takarai ($\hat{O}$shiro, 1990). A key to species, descriptions, distribution data, photographs, and figures are presented to compare the two crickets.

• Ocean and Polar Research
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• v.38 no.4
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• pp.287-294
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• 2016

Marine sponges have been a remarkably rich source of pharmacologically active and structurally diverse natural products. As a part of our continuing search for novel secondary metabolites of biomedical importance from marine invertebrate, we encountered the sponge Lipastrotethya sp. from Chuuk, Micronesia. The crude organic extract of this animal exhibited considerable cytotoxicity against the K562 cell line. Guided by the $^1H$ NMR analysis, flash chromatography of the crude extract followed by HPLC yielded a new triterpene glycoside, along with ten known saponins of the sarasinoside class. The structure of this new compound was determined by combined spectroscopic methods such as COSY, HSQC and HMBC experiment. Among these metabolites, six compounds exhibited moderate cytotoxicity against ACHN, MDA-MB-231, NCI-H23 and NUGC-3 cell lines.

• Korean Journal of Environmental Biology
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• v.31 no.3
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• pp.225-231
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• 2013

To study the characteristics of rocky intertidal invertebrate fauna on the coastal areas of the East Sea, seven regions including Dokdo, Ulleungdo, Gyeongju, Pohang, Yeongdeok, Uljin, and Gangwondo, the common species ratio (%) and similarity index using Bray-Curtis similarity matrix were calculated. The contributed species for dissimilarity between Dokdo and the other East Sea's coastal areas were selected by using SIMPER. The common species ratio and the cluster analysis showed that Ulleungdo presented the highest similarity. However, Yeongdeok showed the highest similarity in the eastern costal areas, and Gangwondo showed the lowest one. However the cluster analysis revealed the discrimination of the rocky intertidal invertebrate community on Dokdo with others region caused by the particularity of rocky shores exposed to strong wave action and by the particular distribution of rocky intertidal invertebrate fauna in Dokdo.

• Korean Journal of Fisheries and Aquatic Sciences
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• v.48 no.6
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• pp.913-919
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• 2015

In vertebrates, the vitamin D receptor (VDR), a member of the nuclear receptor superfamily, binds the biologically active ligand $1{\alpha},25-(OH)_2$-vitamin $D_3$ (1,25 $D_3$). Nearly all vertebrates, including Agnatha, possess a VDR with high ligand selectivity for 1,25 $D_3$ and related metabolites. Although a putative ancestral VDR gene is present in the genome of the chordate invertebrate Ciona intestinalis, the functional characteristics of marine invertebrate VDR are still obscure. To elucidate the ascidian Halocynthia roretzi VDR (HrVDR), we cloned full-length HrVDR cDNA and investigated the transcriptional activity of HrVDR in HEK293 cells. HrVDR consists of 1,680 nucleotides (559 amino acids [aa]), including a short N-terminal region (A/B domain; 26 aa), DNA-binding domain (C domain; 72 aa), hinge region (D domain; 272 aa), and C-terminal ligand-binding domain (E domain; 161 aa). The amino acid sequence identity of HrVDR was greatest to that of C. intestinalis VDR (56%). In the luciferase reporter assays, the transcriptional activity of HrVDR was not significantly increased by 1,25 $D_3$, whereas the farnesoid X receptor agonist GW4064 increased the transactivation of HrVDR. These results suggest the presence of a novel ligand for and a distinct ligand-binding domain in ascidian VDR.