• Title/Summary/Keyword: MaRS

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Association Between Single Nucleotide Polymorphisms in miRNA196a-2 and miRNA146a and Susceptibility to Hepatocellular Carcinoma in a Chinese Population

  • Zhang, Jun;Wang, Rui;Ma, Yan-Yun;Chen, Lin-Qi;Jin, Bo-Han;Yu, Hua;Wang, Jiu-Cun;Gao, Chun-Fang;Liu, Jie
    • Asian Pacific Journal of Cancer Prevention
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    • v.14 no.11
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    • pp.6427-6431
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    • 2013
  • Hepatocellular carcinoma (HCC) is one of the most prevalent cancers in the world and deeply threatens people's health, especially in China. Techniques of early diagnosis, prevention and prediction are still being discovered, among which the approaches based on single nucleotide polymorphisms in microRNA genes (miRNA SNPs) are newly proposed and show prospective potential. In particular, the association between SNPs in miRNA196a-2 (rs11614913) and miRNA146a (rs2910164) and HCC has been investigated. However, the conclusions made were conflicting, possibly due to insufficient sample size or population stratification. Further confirmations in well-designed large samples are still required. In this study, we verified the association between these two SNPs and the susceptibility to HCC by MassARRAY assay in a 2,000 large Chinese case-control sample. Significant association between rs11614913 and HCC was confirmed. Subjects with the genotype of CT+TT or T allele in rs11614913 were more resistant to HCC (CT+TT: OR (95% CI)=0.73 (0.57-0.92), P=0.01; T allele: OR (95% CI)=0.85 (0.75-0.97), P=0.02) and HBV-related HCC (CT+TT: OR (95% CI)=0.69 (0.53-0.90), P=0.01; T allele: OR (95% CI)=0.82 (0.71-0.95), P=0.01). The affected carriers of CT or TT also tended to have lower levels of serum AFP (P=0.01). This study demonstrated a role of rs11614913 in the etiology of HCC. Further research should focus on the clinical use of this miRNA SNP, so as to facilitate conquering HCC.

Genetic Variants of NBS1 Predict Clinical Outcome of Platinum-based Chemotherapy in Advanced Non-small Cell Lung Cancer in Chinese

  • Xu, Jia-Li;Hu, Ling-Min;Huang, Ming-De;Zhao, Wan;Yin, Yong-Mei;Hu, Zhi-Bin;Ma, Hong-Xia;Shen, Hong-Bing;Shu, Yong-Qian
    • Asian Pacific Journal of Cancer Prevention
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    • v.13 no.3
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    • pp.851-856
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    • 2012
  • Objective: NBS1 plays a key role in the repair of DNA double-strand break (DSB). We conducted this study to investigate the effect of two critical polymorphisms (rs1805794 and rs13312840) in NBS1 on treatment response and prognosis of advanced non-small cell lung cancer (NSCLC) patients with platinum-based chemotherapy. Methods: Using TaqMan methods, we genotyped the two polymorphisms in 147 NSCLC patients. Odds ratios (ORs) and their 95% confidential intervals (CIs) were calculated as a measure of difference in the response rate of platinum-based chemotherapy using logistic regression analysis. The Kaplan-Meier and log-rank tests were used to assess the differences in progression-free survival (PFS) and overall survival (OS). Cox proportional hazards model was applied to assess the hazard ratios (HRs) for PFS and OS. Results: Neither of the two polymorphisms was significantly associated with treatment response of platinum-based chemotherapy. However, patients carrying the rs1805794 CC variant genotype had a significantly improved PFS compared to those with GG genotype (16.0 vs. 8.0 months, P = 0.040). Multivariable cox regression analysis further showed that rs1805974 was a significantly favorable prognostic factor for PFS [CC/CG vs. GG: Adjusted HR = 0.62, 95% CI: 0.39-0.99; CC vs. CG/GG: Adjusted HR = 0.56, 95% CI: 0.32-0.97). Similarly, rs13312840 with a small sample size also showed a significant association with PFS (CC vs. CT/TT: Adjusted HR = 25.62, 95% CI: 1.53-428.39). Conclusions: Our findings suggest that NBS1 polymorphisms may be genetic biomarkers for NSCLC prognosis especially PFS with platinum-based chemotherapy in the Chinese population.

Studies on Availability of Components in Extract of Scutellariae Radix by Boiling water Method (전탕(煎湯)에 의한 황금(黃芩)의 성분(成分) 이행율(移行率)에 관한 연구(硏究) I)

  • Ko, Byoung-Seob;Joo, Hye-Jeong;Ma, Jin-Yeul;Park, Kap-Joo;Ahn, Sang-Woo
    • Korean Journal of Oriental Medicine
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    • v.2 no.1
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    • pp.496-505
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    • 1996
  • In order to improve the qualities of boiling extract the availability of standard compounds was investigated in extract of Scutellariae Radix. The standard compounds used baicalin(1), baicalein(2), and wogonin(3). The availabilities were analyzed by thin layer chromatography (TLC) and high performance liquid chromatography(HPLC) on $C_18$ column. The extract of RS-4(W/V=10g/100m1) showed the highest availabilities as 7.95% of baicalin(1), 1.04% of baicatein(2), and 0.31% of wogonin(3).

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LncRNA CRNDE Promotes the Progression of B-cell Precursor Acute Lymphoblastic Leukemia by Targeting the miR-345-5p/CREB Axis

  • Wang, Weimin;Wu, Feifei;Ma, Ping;Gan, Silin;Li, Xue;Chen, Li;Sun, Ling;Sun, Hui;Jiang, Zhongxing;Guo, Feng
    • Molecules and Cells
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    • v.43 no.8
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    • pp.718-727
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    • 2020
  • The imbalance between the proliferation and apoptosis of B-cell precursors is an important contributor to the pathogenesis of B-cell precursor acute lymphoblastic leukemia (BCP-ALL), while its specific regulatory mechanism remains perplexing. This study aimed to expound the underlying mechanism of the proliferation and apoptosis of BCP-ALL cells from the perspective of non-coding RNA. In this study, long non-coding RNA colorectal neoplasia differentially expressed (LncRNA CRNDE) was upregulated in the bone marrow of BCP-ALL patients and BCP-ALL cell lines (NALM-6 and RS4;11). Functionally, LncRNA CRNDE knockdown restrained cell proliferation and boosted cell apoptosis in NALM-6 and RS4;11 cells. The subsequent investigation confirmed that LncRNA CRNDE bound to miR-345-5p and negatively regulated miR-345-5p expression. The overexpression of miR-345-5p suppressed cell proliferation and boosted cell apoptosis in NALM-6 and RS4;11 cells. Further experiments revealed that miR-345-5p downregulated cyclic AMP response element-binding protein (CREB) expression by targeting its mRNA directly. CREB overexpression reversed the effect of miR-345-5p mimic on cell proliferation and apoptosis in NALM-6 and RS4;11 cells. Finally, in vivo experiments showed that LncRNA CRNDE knockdown prolonged the survival of mice xenotransplanted with NALM-6 cells. In conclusion, LncRNA CRNDE upregulated CREB expression by suppressing miR-345-5p, thus promoting cell proliferation and reducing cell apoptosis in BCP-ALL.

Implementation of LabVIEW based Testbed for MHA FTSR (LabVIEW 기반의 MHA 명령방식 비행종단수신기 점검장비 구현)

  • Kim, Myung-Hwan;Hwang, Soo-Sul;Lim, You-Cheol;Ma, Keun-Su
    • Aerospace Engineering and Technology
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    • v.13 no.1
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    • pp.55-62
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    • 2014
  • FTSR(Flight Termination System Receiver) is a device that receives a ground command signal to abort a flight mission when abnormal conditions occur in the space launch vehicle. The secure tone command message shall consist of a series of 11 character tone pattern. Each character consists of the sum of two tones which taken from a set of 7 tones defined by IRIG(Inter-Range Instrumentation Group) in the audio frequency range. The MHA(Modified High alphabet) command adds a security feature to the secure tone command by using the predefined difference code. In order to check the function and performance of MHA FTSR, which is under development, for KSLV-II, the testbed should have functions of RF signal generation, receiver's output port monitoring, RS-422 communication and test data management. In this paper, we first briefly introduce MHA command and FTSR interface, and then show the LavVIEW based testbed include its H/W configuration, S/W implementation and test results.

XPC 939A>C and 499C>T Polymorphisms and Skin Cancer Risk: a Meta-analysis

  • Ji, Geng;Lin, Yuan;Cao, Song-Yu;Li, Luo-Zhu;Chen, Xin-Long;Sun, Bu-Mei;Chen, Chuan-Jun;Ma, Hong-Xia
    • Asian Pacific Journal of Cancer Prevention
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    • v.13 no.10
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    • pp.4983-4988
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    • 2012
  • The xeroderma pigmentosum complementation group C gene (XPC) has been identified as important for repairing UV-related DNA damage. Some subtle changes in this gene may impair repair efficiency and influence susceptibility to human cancers, including skin cancer. Two polymorphisms in XPC, 939A>C (rs2228001) and 499C>T (rs2228000), are considered to have possible associations with the risk of skin cancer, but the reported results have been inconsistent. Here we performed a meta-analysis of the available evidence regarding the relationship between these two polymorphisms and the risk of skin cancer. All relevant studies were searched using PubMed, Embase and Web of Science before February 2012. A total of 8 case-control studies were included in this analysis, and no convincing associations between the two polymorphisms and risk of skin cancer were observed in any of the genetic models. Stratified analyses by skin cancer type also did not detect significant associations in any subgroup. This meta-analysis suggested that the XPC 939A>C and 499C>T polymorphisms may have little involvement in susceptibility to skin cancer.

Implementation of Data Transmission System Using PSD Sensor and Laser Diode Module (PSD 센서와 Laser를 이용한 데이터 전송 시스템 구현)

  • Kim, Myung-Hwan;Ma, Keun-Su;Lee, Jae-Deuk
    • Proceedings of the KIEE Conference
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    • 2005.07d
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    • pp.3016-3018
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    • 2005
  • The PSD(Position Sensitive Detector) is a sensor for detecting the position of incident light. Because of its various advantages, it is used for position and angle sensing, optical range finders, laser displacement sensing, and etc. In the previous study of the position finding system, the laser tracking robot is developed. Small data rate and unidirectionality is the characteristics of data communication both DSP-based pan/tilt control board and the robot. If we can transmit data to the target using PSD sensor and laser diode module, there is no need for communication devices such as the bluetooth and wireless module. For this reason, this paper presents the new method for data transmission. Transmit data using RS-232 is modulated by a VTF(Voltage To Frequency) converter The laser diode module transmits the modulated data. And then the PSD sensor receive that data. Demodulation process is accomplished by the system which is consisted with trans-impedance amplifier, FTV(Frequency To Voltage) converter, and etc.

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Research on Water Edge Extraction in Islands from GF-2 Remote Sensing Image Based on GA Method

  • Bian, Yan;Gong, Yusheng;Ma, Guopeng;Duan, Ting
    • Journal of Information Processing Systems
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    • v.17 no.5
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    • pp.947-959
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    • 2021
  • Aiming at the problem of low accuracy in the water boundary automatic extraction of islands from GF-2 remote sensing image with high resolution in three bands, new water edges automatic extraction method in island based on GF-2 remote sensing images, genetic algorithm (GA) method, is proposed in this paper. Firstly, the GA-OTSU threshold segmentation algorithm based on the combination of GA and the maximal inter-class variance method (OTSU) was used to segment the island in GF-2 remote sensing image after pre-processing. Then, the morphological closed operation was used to fill in the holes in the segmented binary image, and the boundary was extracted by the Sobel edge detection operator to obtain the water edge. The experimental results showed that the proposed method was better than the contrast methods in both the segmentation performance and the accuracy of water boundary extraction in island from GF-2 remote sensing images.

Solid Phase Extraction(SPE) of Curcuminoids from Turmeric by Optimization Analytical Condition (최적 분석조건에 의한 강황으로부터 Curcuminoids의 고체상추출(SPE))

  • Lee, Kwang Jin;Ma, Jin Yeul;Kim, Young Jun;Kim, Young Sik
    • Journal of the Korea Academia-Industrial cooperation Society
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    • v.13 no.10
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    • pp.4927-4935
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    • 2012
  • Turmeric is a medicinal herb with various pharmacological activities. Curcumin, demethoxycurcumin(DMC) and bisdemethoxycurcumin(BDMC) were extracted from turmeric by dipping and ultrasonic wave method. And extraction efficiency was identified using solid phase extraction(SPE). The extracted sample were simultaneously separated and analyzed from three kinds of commercial $C_{18}$ reversed-phase high performance liquid chromatography using water and acetonitrile as mobile phase with isocratic elution mode. Flow rate 1.0mL/min, injection volume $10{\mu}L$ and column oven temperature $40^{\circ}C$ at 425nm wavelength has been conducted. From the experimental results, the optimum mobile phase composition of water/acetonitrile 50/50vol% using RS tech column. It is evident that the amount of curcuminoids extracted(extraction time 4h) by 100% MeOH was higher than any aqueous MeOH composition. Finally, in 100% water extraction, the amount(mAU${\times}$mim) of curcuminoids extracted by SPE was 14.3 and 24.5 times respectively higher than ultrasonic wave and dipping method. The shown results can be applied as sources for pharmaceuticals and functional material.

Quantitative Analysis of Glycyrrhizic Acid in Fermented Glycyrrhizae Radix by HPLC (HPLC를 이용한 발효 감초의 지표 성분 분석)

  • Um, Young-Ran;Shim, Ki-Shuk;Lee, Jae-Hoon;Park, Hwa-Yong;Ma, Jin-Yeul
    • Korean Journal of Oriental Medicine
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    • v.15 no.1
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    • pp.85-89
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    • 2009
  • The aim of this study was to study the quantitative analysis of glycyrrhizic acid in Glycyrrhizae Radix extract fermented with Paecilomyces japonica, Ganoderma lucidum, honey or Nuruk. The amounts of dry on loss were measured and the quantitative analysis of glycyrrhizic acid was performed by high performance liquid chromatographic (HPLC). HPLC method was performed on C18 column ($250\;mm\;{\times}\;4.6\;mm$, $5\;{\mu}m$, RS tech) using gradient solvent mixtures of water-acetonitrile with photodiode array detector (254 nm). The flow rate was $1.0\;m{\ell}/min$. Retention time of glycyrrhizic acid was about 23.96 min and linearity of calibration was $R^2$=0.9998. Contents of glycyrrhizic acid in Glycyrrhizae Radix extract (control) was $5.048\;{\pm}\;0.14$; Contents of glycyrrhizic acid in Glycyrrhizae Radix extract fermented with Paecilomyces japonica (SDT) was $1.975\;{\pm}\;0.07$; Contents of glycyrrhizic acid in Glycyrrhizae Radix extract fermented with Ganoderma lucidum (SYT) was $2.676 \;{\pm}\;0.07$; Contents of glycyrrhizic acid in Glycyrrhizae Radix extract fermented with honey (SST) was $5.191\;{\pm}\;0.06$; Contents of glycyrrhizic acid in Glycyrrhizae Radix extract fermented with Nuruk (SNT) was $5.305\;{\pm}\;0.34$, respectively. Contents of glycyrrhizic acid in SDT and SYT were decreased but that in SST and SNT was increased when compared to control.

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