• Title/Summary/Keyword: MOP

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In Silico Analysis and Molecular Docking Comparison of Mosquito Oviposition Pheromone and Beta-asarone on the Mosquito Odorant Binding Protein-1 (In Silico 분자결합 분석방법을 활용한 MOP와 베타아사론의 열대집모기 후각단백질 활성 부위에 대한 결합 친화도 비교 분석)

  • Kim, Dong-Chan
    • Journal of Life Science
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    • v.28 no.2
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    • pp.195-200
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    • 2018
  • Beta-asarone is the well-known active ingredient of Rhizoma acori graminei. In this study, we investigated and compared the binding affinity of mosquito oviposition pheromone (MOP; (5R,6S)-6-acetoxy-5-hexadecanolide) and beta-asarone on the A domain of the mosquito odorant binding protein 1 (CquiOBP1) by in silico computational docking studies. The three-dimensional crystallographic structure of CquiOBP1 was obtained from the PDB database (PDB ID: 3OGN). In silico computational auto-docking analysis was performed using PyRx, Autodock Vina, Discovery Studio Version 4.5, and the NX-QuickPharm option based on scoring functions. The beta-asarone showed optimum binding affinity (docking energy) with CquiOBP1 as -6.40 kcal/mol as compared to the MOP (-6.00 kcal/mol). Among the interacting amino acids (LEU76, LEU80, ALA88, MET89, HIS111, TRP114, and TYR122), tryptophan 114 in the CquiOBP1 active site significantly interacted with both MOP and beta-asarone. Amino acids substitution (mutation) from non-polar groups to the polar (or charged) groups of the CquiOBP1 dramatically changed the X, Y, Z grid position and binding affinity of both ligands. These results significantly indicated that beta-asarone could be a more potent ligand to the CquiOBP1 than MOP. Therefore, the extract of Rhizoma acori graminei or beta-asarone can be applied to the fields of insecticidal and repellant biomaterial development.

Development of the Algorithm for Optimizing Wavelength Selection in Multiple Linear Regression

  • Hoeil Chung
    • Near Infrared Analysis
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    • v.1 no.1
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    • pp.1-7
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    • 2000
  • A convenient algorithm for optimizing wavelength selection in multiple linear regression (MLR) has been developed. MOP (MLP Optimization Program) has been developed to test all possible MLR calibration models in a given spectral range and finally find an optimal MLR model with external validation capability. MOP generates all calibration models from all possible combinations of wavelength, and simultaneously calculates SEC (Standard Error of Calibration) and SEV (Standard Error of Validation) by predicting samples in a validation data set. Finally, with determined SEC and SEV, it calculates another parameter called SAD (Sum of SEC, SEV, and Absolute Difference between SEC and SEV: sum(SEC+SEV+Abs(SEC-SEV)). SAD is an useful parameter to find an optimal calibration model without over-fitting by simultaneously evaluating SEC, SEV, and difference of error between calibration and validation. The calibration model corresponding to the smallest SAD value is chosen as an optimum because the errors in both calibration and validation are minimal as well as similar in scale. To evaluate the capability of MOP, the determination of benzene content in unleaded gasoline has been examined. MOP successfully found the optimal calibration model and showed the better calibration and independent prediction performance compared to conventional MLR calibration.

Analysis of Trans-Acting Elements for Regulation of moc Operons of pTi15955 in Agrobacterium tumefaciens

  • Jung, Won-Hee;Baek, Chang-Ho;Lee, Jeong-Kug;Kim, Kun-Soo
    • Journal of Microbiology and Biotechnology
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    • v.9 no.5
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    • pp.637-645
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    • 1999
  • Two putative regulator genes, mocR and mocS, of the moc (mannityl opine catabolism) operons in pTi15955 of the octopine-/mannityl opine-type Agrobacterium tumefaciens strain 15955, were tested for their possible roles as repressors in the moc operons. The regions upstream of macC and mocD, the first structural genes in the two divergently oriented moc operons, were transcriptionally fused into the promoterless lacZ reporter gene. Each of the lacZ-fusions was introduced into Agrobacterium strain UIA5, a Ti plasmid-cured derivative, harboring either a mocR or a mocS clone. The resulting strains were grown in media containing various sugar sources, and the $\beta$-galactosidase activities were quantitatively measured. The results suggested that MocR repressed the expression of macC and macD. The expression of the fused $\beta$-galactosidase was not induced by mannopine (MOP) or possible catabolic intermediates of the opine, e.g. santhopine (SOP), glucose, mannose, or glutamine. However, the repression was significantly relieved by the supplementation of MOP and the concomitant introduction of the agcA gene encoding MOP cyclase that catalyzes the lactonization of MOP to agropine (AGR). These results suggested that AGR, rather than MOP or the other catabolic intermediates, is the inducer for the expression of the operon. On the contrary to previous report showing that the induction levels of macC and macD were lowered by the supplementation of inorganic nitrogen in media, the expression of these genes was not affected by the level of nitrogen in our reporter system. MocS did not strongly repress the expressions of macC and mocD. It is possible that MocS may be involved in the regulation of the operons present downstream of the moc operon, which are responsible for the utilization of mannopinic acid and agropinic acid.

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Fat replacement by pecan nut and oregano oil and their impact on the physicochemical properties and consumer acceptability of frankfurters

  • Orozco, Daniela;Alarcon-Rojo, Alma Delia;Chavez-Mendoza, Celia;Luna, Lorena;Carrillo-Lopez, Luis Manuel;Ronquillo, Oswaldo
    • Animal Bioscience
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    • v.34 no.10
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    • pp.1674-1683
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    • 2021
  • Objective: A study was conducted to determine the physicochemical quality and consumer acceptability of beef frankfurter-type sausages formulated with pecan nut paste and Mexican oregano oil (MO) of two varieties, Poliomintha longiflora Gray (Mexican oregano Poliomintha, MOP) or Lippia berlandieri (Mexican oregano Lippia, MOL). Methods: Frankfurters were processed under six treatment conditions: control (10.67% pork fat), MOP (control + 0.01% MOP), MOL (control + 0.01% MOL), MOP-N (control + 0.01% MOP + 6% pecan nut paste), MOL-N (control + 0.01% MOL + 6% pecan nut paste), and C-N (control + 6% pecan nut paste). The physicochemical properties and the consumer acceptability were determined. Results: The addition of MO and nut did not influence the water holding capacity, drip loss, and luminosity of frankfurters, but those ingredients increased pH and shear force (p<0.05) and decreased redness (p<0.05) of frankfurters. Frankfurters were generally well accepted by consumers. However, general acceptability of sausages decreased with the addition of MO. Control sausages showed the highest acceptability. Conclusion: The MO and pecan nut paste do not affect drastically the quality of frankfurters. These results provide evidence that partial replacement of pork fat by pecan nut in frankfurters maintain a consistent physicochemical quality and its commercialization looks promising given consumers' acceptance.

Effects of marine oligomeric polyphenols on body composition and physical ability of elderly individuals with sarcopenia: a pilot study

  • Kwon, Il-Su;Park, Deuk-Su;Shin, Hyeon-Cheol;Seok, Myung-Gyu;Oh, Jae-Keun
    • Korean Journal of Exercise Nutrition
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    • v.25 no.3
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    • pp.1-7
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    • 2021
  • [Purpose] We aimed to identify the effects of marine oligomeric polyphenol (MOP) intake in elderly individuals with sarcopenia. [Methods] Older adults (aged 65 years or older) were recruited based on the diagnostic criterion for sarcopenia and were randomly assigned to the MOP intake group (n=10) or the placebo (PBO) intake group (n=10). To determine the effect of MOP intake received for four weeks, the pre- and post-intake body composition (weight, skeletal muscle mass, and bone density) and senior fitness tests were assessed. [Results] Our results showed there were significant differences in the skeletal muscle mass (p=0.039), bone density (p=0.020), fat-free mass index (p=0.026), and 2.4 m up and go test (p=0.001) between pretest and post-test. There was a significant difference between the pre-test and post-test and an interaction effect for the one-leg stand test (p=0.010 and p=0.049, respectively). However, there were no significant differences in body fat percentage, calf circumference, grip strength, or the chair rise test. [Conclusion] Some variables exhibited significant differences in the pre- and post-assessments, and there was an interaction effect for the one-leg stand. However, this was insufficient to prove the effectiveness of MOP intake in improving sarcopenia. Therefore, additional studies are essential to examine the effects of MOP intake and exercise intervention on the body composition and fitness of patients over a longer period.

A monitering reference model construction of MOP foundation (MOP 기반 모니터링 참조 모델 구축)

  • Oh, Jeong-Jin;Cho, Sang-Sik
    • Proceedings of the Korean Society of Computer Information Conference
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    • 2009.01a
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    • pp.129-134
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    • 2009
  • 본 연구에서는 모니터링 정보의 생성, 처리, 분산 및 표현에 수반되는 사양을 정형화된 주석으로 표현하여 구현이 함께 이루어질 수 있는 하나의 자동 코드 생성 알고리즘을 제안하는데 있다. 일반적인 패러다임은 언어 및 사양 독립적이지만, 제안되는 패러다임은 모니터링 지향 프로그래밍 영역에 속하는 것으로 하나의 프로타입 형태의 모니터링 지향 환경이 구현되고 제안된다. 입력으로 하나의 공식을 취하는 프로그램을 제공하는 방식으로 모니터링 지향 프로그래밍 환경에 대한 새로운 로직을 추가하고 미리 정의된 서식으로 출력이 이루어지도록 하는데 있다.

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Multiple Objective Input-Output Analysis in Energy and Environmental Planning (다목적 산업연관분석을 이용한 에너지.환경계획)

  • 강희정;차재호;유왕진
    • Journal of Korean Society of Industrial and Systems Engineering
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    • v.21 no.46
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    • pp.207-219
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    • 1998
  • Multiple Objective Programming(MOP) has been suggested for the solution of completed decision problems. Decision analysis in numerous areas, including energy and environmental planning, necessarily requires consideration of multiple conflicting objectives, MOP has been successfully applied to a number of these problems. The objective of this paper is to present a MOP process which are integrated model with the Input-Output(I-O) analysis for energy and environment planning in industrial sectors. In the model, three objectives are observed such as (1) value added (2) total energy consumption and (3) environmental impacts. Special emphasis is placed on the police implications of industrial structures.

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Photocycloaddition Reaction of 8-Methoxypsoralen and 5,7-Dimethoxycoumarin with Maleimide

  • Shim, Sang-Chul;Bong, Pill-Hoon;Kim, Jeong-Min
    • Bulletin of the Korean Chemical Society
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    • v.3 no.4
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    • pp.153-157
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    • 1982
  • $C_4$-Photocycloaddition of 8-methoxypsoralen (8-MOP) and 5,7-dimethoxycoumarin (DMC) to maleimide was studied in order to elucidate the mechanism of the photobiological activities of these molecules. The photoreaction was carried out in chloroform solution and frozen aqueous solution state. The major product was isolated and characterized by spectroscopic methods. The photoadduct between 8-MOP and maleimide was shown to be an 1:1 $C_4$-cycloadduct through the photocycloaddition of 4',5'-furyl double bond of 8-MOP to maleimide. The stereochemistry of cyclobutane ring of this photoadduct is consistent with the anti configuration. The photoadduct between DMC and maleimide was shown to be an 1:1 $C_4$-cycloadduct through the photocycloaddition of 3,4-pyrone double bond of DMC to maleimide.

A Study on the Additives of mixed Gas charged in Thermostatic Bulb for Expansion Valve (팽창밸브 개폐용 감온통 혼합가스의 첨가제 연구)

  • Kim, Si-Young;Ju, Chang-Sik;Koo, Su-Jin
    • Journal of Power System Engineering
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    • v.18 no.6
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    • pp.126-132
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    • 2014
  • The P-T characteristics of mixed refrigerant in thermostatic expansion valve sensing bulb were studied using R-134a and R-410A refrigerant. The characteristics of mixed refrigerant were investigated according to pressure variation and the variation of composition ratio of R-134A and R-410A in the temperature range of $-15^{\circ}C{\sim}15^{\circ}C$. The Thermodynamic characteristic values of the mixed refrigerants were identified using the characteristic value analysis program of mixed refrigerant(Refrop v9.0, NIST). The P-T characteristics in the case of the mixing ratio of 90:10 for R-410A and R-134A were the same result as R-22. And the physical properties showed similar results with R-22. The Maximum operating pressure(MOP) of mixed refrigerant showed a tendency to decrease with decreasing the mixing ratio of additive gases($N_2$ or He) gases. The characteristics in the case of the mixing ratio of 80:1 for mixed refrigerant and additive gases were the similar result as Reference refrigerant.(R-22 MOP, Sporlan company) In addition $N_2$ and He, both showed the same results. It was able to confirm that a MOP on the thermostatic expansion valve sensing bulb can be maintained by adjusting the mixing ratio of mixed refrigerant gases and additive gases.

Discovery of Frequent Sequence Pattern in Moving Object Databases (이동 객체 데이터베이스에서 빈발 시퀀스 패턴 탐색)

  • Vu, Thi Hong Nhan;Lee, Bum-Ju;Ryu, Keun-Ho
    • The KIPS Transactions:PartD
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    • v.15D no.2
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    • pp.179-186
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    • 2008
  • The converge of location-aware devices, GIS functionalities and the increasing accuracy and availability of positioning technologies pave the way to a range of new types of location-based services. The field of spatiotemporal data mining where relationships are defined by spatial and temporal aspect of data is encountering big challenges since the increased search space of knowledge. Therefore, we aim to propose algorithms for mining spatiotemporal patterns in mobile environment in this paper. Moving patterns are generated utilizing two algorithms called All_MOP and Max_MOP. The first one mines all frequent patterns and the other discovers only maximal frequent patterns. Our proposed approach is able to reduce consuming time through comparison with DFS_MINE algorithm. In addition, our approach is applicable to location-based services such as tourist service, traffic service, and so on.