• Title/Summary/Keyword: MALDI-TOF Mass

Search Result 272, Processing Time 0.023 seconds

Synthesis and Characterization of Star-shaped Aliphatic Polyester

  • Shin, Young-Cheol;Park, Kil-Yeong;Jin, Moon-Young;Hong, Sung-Kwon;Donghyun Cho;Taihyun Chang;Moonhor Ree
    • Macromolecular Research
    • /
    • v.9 no.2
    • /
    • pp.100-106
    • /
    • 2001
  • Several star-polymers with aliphatic cores were synthesized by ring opening polymerization (ROP) of $\xi$-caprolactone using stannous 2-ethyl-hexanoate as a catalyst. The star-polymers were thoroughly analyzed by MALDI-TOF mass spectrometry, temperature gradient interaction chromatography and $\^$13/C-NMR to obtain detailed information of the molecular structure. The imperfection of the star-polymers seemed to be originated from restricted participation of sterically hindered hydroxyl groups of initiator. The synthesized star-polymers had narrow molecular weight distributions. Various reaction conditions to control the imperfection were studied.

  • PDF

Recombinant Expression, Isotope Labeling and Purification of the Vitamin D Receptor Binding Peptide

  • Chae, Young-Kee;Singarapu, Kiran;Westler, W. Milo;Markley, John L.
    • Bulletin of the Korean Chemical Society
    • /
    • v.32 no.12
    • /
    • pp.4337-4340
    • /
    • 2011
  • The vitamin D receptor binding peptide, VDRBP, was overexpressed as a fused form with the ubiquitin molecule in Rosetta(DE3)pLysS, a protein production strain of Escherichia coli harboring an induction controller plasmid. The fusion protein was bound to the immobilized metal ions, and the denaturation and renaturation of the fusion protein were performed as a part of the purification procedure. After the elution of the fusion protein, the peptide hormone was released from its fusion partner by using yeast ubiquitin hydrolase (YUH), and subsequently purified by reverse phase chromatography. The purity of the resulting peptide fragment was checked by MALDI-TOF mass and NMR spectroscopy. The final yields of the target peptide were around 5 and 2 mg per liter of LB and minimal media, respectively. The recombinant expression and purification of this peptide will enable structural and functional studies using multidimensional NMR spectroscopy and X-ray crystallography.

Synthesis, Spectral Characterization, Electron Microscopic Study and Influence on the Thermal Stability of Phosphorus-containing Dendrimer with a 4,4'-Sulphonyldiphenol at the Core

  • Dadapeer, Echchukattula;Rasheed, Syed;Raju, Chamarthi Naga
    • Bulletin of the Korean Chemical Society
    • /
    • v.32 no.2
    • /
    • pp.498-502
    • /
    • 2011
  • The divergent synthesis of novel phosphorus-containing dendrimer with 4,4'-sulphonyldiphenol at the core has been accomplished involving simple condensation reactions using $P(O)Cl_3$, $P(S)Cl_3$, 3-amino-phenol, 3-hydroxy-benzaldehyde, and 2-butyn 1, 4-diol. The final compound was a Schiff's base macromolecule possessing 4 imine bonds, 8 acetylenic bonds and 8 OH groups at the periphery. The structures of intermediate compounds were confirmed by IR, NMR ($^1H$, $^{13}C$ and $^{31}P$), LC-Mass and C, H, N analysis. The structure of the final dendrimer (5) was confirmed by IR, NMR ($^1H$, $^{13}C$ and $^{31}P$), MALDI-TOF-MS, and C, H, N analysis. The surface morphological characteristics of the final dendrimer were understood by Scanning Electronic Microscopic study (SEM). The thermal stability of the final dendrimer was studied by TGA/DTA analysis.

High Throughput Proteomic Approaches for the Dissection of Light Signal Transduction Pathways in Photosynthetic Cyanobacterium Synechocystis sp.PCC 6803

  • Chung Young-Ho;Park Young Mok
    • Proceedings of the Microbiological Society of Korea Conference
    • /
    • 2002.10a
    • /
    • pp.203-205
    • /
    • 2002
  • Light is an environmental signal that regulates photomovement and main energy source of photosynthesis in the cyanobacterium Synechocystis sp. PCC 6803 (Syn6803). Syn6803 is a popular model system for study of plant functional genomics. In this report, we adopted 2D gel based proteomics study to investigate proteins related with the light absorption and photo-protection in Syn6803. More than 700 proteins were detected on the SDS-gels stained with silver nitrate. Several proteins showing different expression level under various light conditions were identified with MALDI-TOF Mass spectrometry. As a comparison, we also conducted ICAT-based proteome study using WT and cphl (cyanobacterial phytochrome 1) mutant. A cphl deletion led to changes in the expression of proteins involved in translation, photosynthesis including photosystem and CO2 fixation, and cellular regulation. We are currently involved in TAP-tagging method to study protein-protein interactions in search for the molecular component involved in the light signal transduction of Syn6803 photomovement.

  • PDF

Proteomic identification of the bovine pregnancy associated proteins by peptide mass fingerprinting

  • Kang, Sun-Chul;Kim, Eun-Jung;Pyo, Jae-Hoon;Lim, Jin-Kyu
    • 한국생물공학회:학술대회논문집
    • /
    • 2002.04a
    • /
    • pp.558-561
    • /
    • 2002
  • In this study, a method for the localization of pregnancy-specific proteins from cow urine on 2-D gel have been established. The proteins were digested with trypsin in gel and then analyzed with MALDI- TOF or transferred to a membrane and microsequenced. To examine the pregnancy associated protein spot 2 as a diagnosis marker in bovine urine 2-D western blotting was performed. This antibody was reacted specifically in the protein of pregnant cow’s urine. Consequently spot 2 was identified and found to be good candidates for developing cow pregnancy detection assay kit.

  • PDF

Isolation of Antimicrobial Peptides from Skin Secretions of the Oriental Fire-bellied Toad, Bombina orientalis

  • Hwang, Jeong-Ryeol;Yeo, Seong-Mun
    • Animal cells and systems
    • /
    • v.2 no.3
    • /
    • pp.361-365
    • /
    • 1998
  • Antimicrobial peptides are widely distributed in nature and appear to play important roles in the host defense of plants and animals. In this study, we isolated and characterized three antimicrobial peptides from skin secretions of the oriental fire-bellied toad, Bombina orientalis. These purified peptides were referred to as P1, P2, and P3 in order of their elution. P1, P2, and P3 have molecular weights of 2569, 2566, and 2370 Da by MALDI-TOF mass spectrometer, respectively. They are heat-stable, amphipathic peptides of 24-27 amino acids without cysteine residues. All three peptides are active against representative gram negative and gram positive bacterial species, and in particular, P1 appears to have distinctive antifungal activity. However, no significant hemolytic activity was found for these peptides.

  • PDF

Proteomic Analysis of Osmotic Stress Response in Streptomyces coelicolor A3(2) Using 2-Dimentional Gel Electrophoresis and MALDI-TOF Mass Spectrometry

  • Cha, Chang-Jun;Lee, Eun-Jin;Roe, Jung-Rye
    • Proceedings of the Korean Biophysical Society Conference
    • /
    • 2002.06b
    • /
    • pp.55-55
    • /
    • 2002
  • An alternative sigma factor as encoded by the $\sigma$$\^$B/ gene in Streptomyces coelicolor A3(2) was known to be involved in the differentiation and osmotic stress response. Protein expression profiles of wild-type and a $\sigma$$\^$B/ mutant strain of S coelicolor A3(2), which is impaired in defense against osmotic stress, were compared in the absence and presence of osmotic stress, using 2-dimentional gel electrophoresis.(omitted)

  • PDF

Identification of meat Quality related genes in Korean Native Chicken using Proteomics

  • Jung, Kie-Chul;Park, Kang-Duk;Jang, Byoung-Gui;Sang, Byung-Don;Lee, Jun-Heon
    • Proceedings of the Korea Society of Poultry Science Conference
    • /
    • 2003.11a
    • /
    • pp.129-130
    • /
    • 2003
  • There is growing interest for improving meat quality in chicken. Recently, the proteomics can be used as a valuable tool for identifying candidate proteins. In this study, we investigated the proteins expressed in chicken muscle for obtaining chicken muscle reference two dimensional(2D) map and identifying the proteins in muscle affecting Ginseng diet. A few candidate proteins have been currently characterizing using MALDI-TOF Mass spectrometry. Further investigations of the proteins can be used as valuable markers for selection of better quality chicken meat.

  • PDF

Supramolecular aminocatalysis via inclusion complex: Amino-doped β-cyclodextrin as an efficient supramolecular catalyst for the synthesis of chromeno pyrimido[1,2-b]indazol in water

  • Shinde, Vijay Vilas;Jeong, Daham;Jung, Seunho
    • Journal of Industrial and Engineering Chemistry
    • /
    • v.68
    • /
    • pp.6-13
    • /
    • 2018
  • Well-modified amino-appended ${\beta}$-cyclodextrin ($AA-{\beta}-CD$) with an amino group at the primary face of the ${\beta}-CD$ was synthesized and used in the catalytic synthesis of chromeno pyrimido[1,2-b]indazol as supramolecular catalysts in water for the first time. $AA-{\beta}-CD$ was characterized by FT-IR, NMR, MALDI-TOF mass spectrometry, and SEM analysis. A possible reaction mechanism featuring molecular complexation was suggested based on 2D NMR (ROESY) spectroscopy, FE-SEM, DSC, and FT-IR. Advantages such as operational simplicity, recyclability of the catalysts, and accessibility in aqueous medium render this protocol eco-friendly.