• Title/Summary/Keyword: MALDI-TOF/TOF MS

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Proteomic Approach to the Cytotoxicity of 5-FU(Fluorouracil) in Colon Cancer Cells (대장암 세포에서 5-FU(Fluorouracil)의 세포독성과 관련된 단백체 분석)

  • Lee, Seo-Young;Song, Jin-Su;Roh, Si-Hun;Kim, Geun-Tae;Hong, Soon-Sun;Kim, Hie-Joon;Kwon, Sung-Won;Park, Jeong-Hill
    • YAKHAK HOEJI
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    • v.53 no.3
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    • pp.145-150
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    • 2009
  • We evaluated cytotoxic effect based on the MTT assay and identified altered proteins in 5-FU(fluorouracil) treated HT29 cells using two-dimensional gel electrophoresis and MALDI-TOF/TOF-MS. As proteins inducing apoptosis, siah binding protein 1 and p47 protein isoform a were up-regulated and tumor protein translationally-controlled 1 was down-regulated by 5-FU treatment. And mannose 6 phosphate receptor binding protein 1 controls DNA mismatch repair system was increased. We suggest 5-FU promotes a cytotoxicity under the action of these proteins in colon cancer cells.

IDENTIFICATION OF DIFFERENTIALLY EXPRESSED PROTEINS IN DIFFERENT GROWING STAGES IN CHICKEN LIVER BY PROTEOMICS APPROACH

  • Lee, K.Y.;Jung, K.C.;Jang, B.G.;Choi, K.D.;Lee, J.H.
    • Proceedings of the Korea Society of Poultry Science Conference
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    • 2006.11a
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    • pp.74-76
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    • 2006
  • 닭의 간은 해독작용, 당의 저장, 혈장 단백질의 합성 등 주요 기능을 하는 것으로 알려져 있다. 본 연구는 간에서 성장 단계별로 발현량에 차이를 보이는 단백질들을 비교해 보았다. 2차원적 전기 영동에 의해 분리된 300개 이상의 단백질들이 확인되었으며 이 중 성장 단계별 특이적인 13개의 단백질은 MALDI-TOF MS에 의하여 분석이 되어졌다. 본 연구를 통하여 밝혀진 단백질들은 생화학적인 연구에 중요한 자료를 제공할 것으로 사료된다.

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Characterization of Polysaccharides from Artemisia capillaris and Artemisia sylvatica (사철쑥과 그늘쑥의 다당류 연구)

  • 황은주;권학철;정칠만;문형인;김선여;지옥표;이강노
    • YAKHAK HOEJI
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    • v.43 no.4
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    • pp.423-428
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    • 1999
  • Two polysaccharides, ACP-UMP and ACP-ULF, were purified from the aerial part of Artemisia capillaris by anion-exchange chromatography, ultrafiltration, and gel filtration chromatography. The polysaccharides appeared to be homogenious from the results of HPLC. The molecular weights of ACP-UMF and ACP-ULF were estimated to be 16305.92 D and 3292.26 D, respectively, by MALDI-TOF MS. The sugar compositions were determined by GC to be arabinose 10.05%, xylose 1.67%, mannose 5.45G, galactose 39.06%, glucose 15.43% for ACP-UMF and arabinose 11.60%, xylose 11.15%, mannose 6.37% galactose 32.47%, glucose 18.35% for ACP-ULF. A polysaccharide, SP-M was determined to be 2462.52 D by MALDI-TOF MS. SP-M consisted mainly of rhamnose 36.49%, arabinose 29.00%, and glucose 19.38%. Incubation of CCl4-intoxicated hepatocytes with ACP-UMF reduced the levels of glutamic pyruvic transaminase (GPT) and cellular malondialdehyde (MDA) to 62.8% and 23.8%. ACP-ULF also reduced the levels of GPT and MDA to 46.1% and 38.1% and 26.3%, respectively.

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Analysis of Folate by Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry

  • Cha, Sang-Won;Kim, Hie-Joon
    • Bulletin of the Korean Chemical Society
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    • v.24 no.9
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    • pp.1308-1312
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    • 2003
  • Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) was used to observe folic acid and its derivatives such as tetrahydrofolate and 5-methyltetrahydrofolate in a vitamin tablet and in foods. Folic acid in a vitamin tablet was determined using angiotensin I as an internal reference. Tetrahydrofolic acid, 5-methyltetrahydrofolic acid, and an oxygenated folate were observed from a human blood sample using graphite plate. The results show that these mass spectrometric methods are useful for quickly obtaining a profile of folates.

Efficient Method for the Cleavage of Fullerene Oxides with Several Aromatic Amines under Ultrasonic Irradiation (초음파 조건에서 방향족 아민 화합물을 사용한 풀러렌 산화물 쪼개짐 반응)

  • Lee, Jong-Wook;Lee, Young-Min;Park, Byoung-Eun;Ko, Weon-Boe
    • Elastomers and Composites
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    • v.42 no.1
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    • pp.1-8
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    • 2007
  • The cleavage of fullerene oxides with several aromatic amines such as 4-nitroaniline, 3-nitroaniline, 4-isopropylaniline in the present of $FeCl_3$ occurred under ultrasonic irradiation in air at $25{\sim}43^{\circ}C$. The aminated fullerenes were confirmed by MALDI-TOF-MS and UV-vis spectra.

Study on the Chemical Polymerization of Pyrrole in the Presence of Cyclic Poly(oxyethylene)s (환형 폴리옥시에틸렌 존재하의 피롤의 화학적 중합에 관한 연구)

  • 차국찬;김진환;배진영
    • Polymer(Korea)
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    • v.26 no.5
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    • pp.568-574
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    • 2002
  • Inclusion compounds using cyclic poly(oxyethylene)s as host molecules have been used to polymerize pyrrole chemically in aqueous medium. This general synthetic strategy makes it possible to grow rigid aromatic polymers in aqueous medium by chemical oxidation method. It is an easy method to obtain rigid polymers in a very mild manner. Some threaded and water-soluble polypyrroles are obtained, and their characterization is performed by NMR, IR, UV, and MALDI-TOF MS measurements.

Highly Dispersed CuO Nanoparticles on SBA-16 Type Mesoporous Silica with Cyclam SBA-16 as a Precursor

  • Prasetyanto, Eko Adi;Sujandi, Sujandi;Lee, Seung-Cheol;Park, Sang-Eon
    • Bulletin of the Korean Chemical Society
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    • v.28 no.12
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    • pp.2359-2362
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    • 2007
  • MALDI-TOF-MS technique was applied to obtain structural and compositional information of synthetic polyamides, Nylon6 and Nylon66. Mass spectra of both the original and the hydrolyzed polyamide samples were analyzed using the self calibration method as well as the internal calibration method with the standard materials of known masses. The MALDI-TOF mass spectra of Nylon6 samples showed the presence of protonated, sodiated, and potassiated ions that were assigned to cyclic and NH2/COOH terminated linear oligomers. From the MALDI-TOF mass spectra of Nylon66 samples, the potassiated linear oligomers with three different end groups are identified as well as the cyclic oligomers, i.e., NH2/COOH terminated oligomers, NH2/NH2 terminated oligomers, and COOH/COOH terminated oligomers. Full characterization of the molecular species and end groups present in the polyamide samples has been achieved, and also the changes in mass spectral patterns after the hydrolysis of the samples are presented.

Characterization of Yeast and Bacterial Type Strains with Food and Agricultural Applications by MALDI-TOF Mass Spectrometry Biotyping

  • Harnpicharnchai, Piyanun;Jaresitthikunchai, Janthima;Seesang, Mintra;Jindamorakot, Sasitorn;Tanapongpipat, Sutipa;Ingsriswang, Supawadee
    • Microbiology and Biotechnology Letters
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    • v.48 no.2
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    • pp.138-147
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    • 2020
  • Various microorganisms play important roles in food fermentation, food spoilage, and agriculture. In this study, the biotype of 54 yeast and bacterial strains having high potential for utilization in food and agriculture, including Candida spp., Lactobacillus spp., and Acetobacter spp., were characterized by matrix-assisted laser desorption/ionization time-of flight mass spectrometry (MALDI-TOF MS). This characterization using a fast and robust method provides much-needed information on the selected microorganisms and will facilitate effective usage of these strains in various applications. Importantly, the unique protein profile of each microbial species obtained from this study was used to create a database of fingerprints from these species. The database was validated using microbial strains of the same species by comparing the mass spectra with the created database through pattern matching. The created reference database provides crucial information and is useful for further utilization of a large number of valuable microorganisms relevant to food and agriculture.

Sonochemical Synthesis of Fullerene Oxides $[C_{70}O_n](n=1{\sim}2)$ Using Metal Hexacarbonyl Complexes $M(CO)_6$ (M=Cr, Mo, W) Under Air Atmosphere (공기 중에서 금속 헥사카르보닐 착물 $M(CO)_6$ (M=Cr, Mo, W)를 이용한 폴러렌 산화물 $[C_{70}O_n](n=1{\sim}2)$의 초음파화학 합성)

  • Ko, Weon-Bae;Park, Young-Hwan
    • Elastomers and Composites
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    • v.40 no.3
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    • pp.174-180
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    • 2005
  • Sonochemical synthesis of fullerene oxides $[C_{70}O_n](n=1{\sim}2)$ by fullerene$[C_{70}]$ and metal hexacarbonyl complexes $M(CO)_6$(M=Cr, Mo, W) took place under air atmosphere. The reactivity of fullerene$[C_{70}]$ and several metal hexacarbonyl complexes $M(CO)_6$(M=Cr, Mo, W) under same ultrasonic condition increased in the order of $Mo(CO)_6$ > $W(CO)_6$ > $Cr(CO)_6$. The MALDI-TOF-MS, UV-visible spectra, and HPLC analysis confirmed that the products of sonochemical reaction were $[C_{70}O_n](n=1{\sim}2)$.

Synthesis of Fullerene Oxide by Fullerene ($C_{70}$) and Various Amino N-Oxides under Ultrasonic Irradiation (초음파 조건에서 여러가지 아민 N-옥시드와 풀러렌($C_{70}$)를 이용한 풀러렌 산화물의 합성)

  • Ko, Weon-Bae;Han, Ji-Yeon;Lim, Young-A;Shin, Won-Jic;Yu, Gu-Yong
    • Elastomers and Composites
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    • v.39 no.2
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    • pp.153-160
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    • 2004
  • Fullerene oxides were synthesized by fullerene ($C_{70}$) and several amine N-oxides such as 3-picoline N-oxide, pyridine N-oxide hydrate, quinoline N-oxide, and isoquinoline N-oxide under ultrasonic condition at $25{\sim}43^{\circ}C$. The reactivity of fullerene ($C_{70}$) with various amine N-oxides undo, ultrasonic irradiation showed the same in all of the proceeding experiments; 3-picoline N-oxide : pyridine N-oxide hydrate : quinoline N-oxide : isoquinoline N-oxide. The MALDI-TOF MS, UV-vis spectrophotometer and HPLC analysis confirmed that the products of fullerene oxidation are [$C_{70}(O)n$] (n=1).