• 미생물과산업
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• 제11권1호
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• pp.13-20
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• 1985

특이 단백질(gene II protein)의 정성적 또는 정량적 변화에 의해 DNA 복제에 필요한 replication orgin sequence의 일부분이었단 replication enhancer를 불필요하게 함으로써 minimum replication origin을 core region만으로 국한 되게 함이었다.

• Ocean and Polar Research
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• 제29권4호
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• pp.411-418
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• 2007

We studied the bottom morphology and sedimentary environments of the Masan Bay using high-resolution Chirp seismic profiles and sediments data. According to deep-drilled core samples (up to 20 m thick) penetrated into the weathered rock basement, the sediments consist largely of three sediment types: the lower sandy gravel facies (Unit I) of 1-4 m in thickness, the middle sandy mud and/or muddy sand facies(Unit II) of 1-2 m thick and the upper mudfacies (Unit III) of over 10 m in thickness. The sedimentary column above the acoustic basement can be divided into two major sequences by a relatively strong mid-reflector, which show the lower sedimentary sequenc e(T) with parallel to subparallel internal reflectors and the upper sedimentary sequence(H) with free acoustic patterns. Acoustic basement, the lower sedimentary sequence (T), and the upper sequence (H) are well correlated with poorly sorted massive sandy gravels (Unit I), the sand/mud-mixed sediment (Unit II), and the muddy facies(Unit III), respectively. The acoustic facies and sediment data suggest that the Masan bay is one of the most typical semi-enclosed coastal embayments developed during the Holocene sea-level changes. The area of the Masan Bay reduced from about $19\;km^2$ in 1964 to about $13\;km^2$ in 2005 by reclamation, and its bottom morphology changed as a result of dredging of about $2{\times}10^7\;m^3$.

• 한국자원식물학회지
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• 제9권3호
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• pp.305-310
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• 1996

유용 취나물 5종류의 종간 유사도 및 종내 변이를 파악하기 위하여 38개체를 대상으로 PCR 방법을 이용하여 비교분석하였다. 사용된 62가지 primer 중에서 38개체 전체에서 band를 보여준 것은 10가지였고, 이를 통해 얻어진 총 band의 수는 176개로 나타났다. 종내변이는 청옥취가 31.1%에 해당하는 15개의 polymorphic band를 가져 변이가 가장 낮았으며 곰취는 61.1%로 가장 높게 나타났다. 군집분석 결과 조사된 38개체는 유사도 0.93에서 5종의 구분이 가능하였으며 38개체 각각은 유사도 0.62-0.99의 유사성을 갖는 것으로 나타났고 종내변이는 0.93이상으로 높게 나타나 변이가 적은 것으로 나타났다. 이상의 결과에서 PCR방법을 이용한 결과가 취나물 5종류를 구분하는데 유용하게 사용되었으며 군집분석 결과 종내 변이가 매우 낮은 것으로 나타났다.

• Interdisciplinary Bio Central
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• 제3권1호
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• pp.1.1-1.6
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• 2011

Recently, with the progress of genome sequencing, materials and information for research on tomato (Solanum lycopersicum) have been systematically organized. Tomato genomics tools including mutant collections, genome sequence information, full-length cDNA and metabolomic datasets have become available to the research community. In Japan, the National BioResource Project Tomato (NBRP Tomato) was launched in 2007, with aims to collect, propagate, maintain and distribute tomato bioresources to promote functional genomics studies in tomato. To this end, the dwarf variety Micro-Tom was chosen as a core genetic background, due to its many advantages as a model organism. In this project, a total of 12,000 mutagenized lines, consisting of 6000 EMS-mutagenized and 6000 gamma-ray irradiated M2 seeds, were produced, and the M3 offspring seeds derived from 2236 EMS-mutagenized M2 lines and 2700 gamma-ray irradiated M2 lines have been produced. Micro-Tom mutagenized lines in the M3 generation and monogenic Micro-Tom mutants are provided from NBRP tomato. Moreover, tomato cultivated varieties and its wild relatives, both of these are widely used for experimental study, are available. In addition to these bioresources, NBRP Tomato also provides 13,227 clones of full-length cDNA which represent individual transcripts non-redundantly. In this paper, we report the current status of NBRP Tomato and its future prospects.

• Plant Resources
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• 제3권3호
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• pp.211-218
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• 2000

Intraspecific genetic relationship of 19 variation types of the Yam (Dioscorea alata) classified by their external morphological characteristics such as leaf and tuber shape were assessed by DNA using random and specific primer. Twenty two out of 113 primers (100 random[10-mer] primers, two 15 mer [M13 core sequence, and (GGAT)$_4$ sequence]) had been used in PCR-amplification. Only 12 primers, however, were success in DNA amplification in all of the analyzed plants, resulting in 93 randomly and specifically amplified DNA fragments. The analyzed taxa showed very high polymorphisms(69 bands, 71.0 %), allowing individual taxon to be identified based on DNA fingerprinting. Monomorphic bands among total amplified DNA bands of each primer was low under the 50%. Similarity indices between accessions were computed from PCR(polymerase chain reaction) data, and genetic relationships among intraspecific variations were closely related at the levels ranging from 0.66 to 0.90. These DNA data were not matched well with those of morphological characters since they were divided into two major groups at the similarity coefficient value of 0.70. Therefore, Grouping of species into variation types by mainly morphological charactistics was suggested unreasonable.

• Ocean and Polar Research
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• 제36권1호
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• pp.13-24
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• 2014

본 연구에서는 선진국형의 종합적인 빙하코어 연구를 수행하기 위해서 요구되는 빙하시료 전처리 방법 설정과 기초 프록시 분석 기술을 확립하였다. 빙하코어 시료는 2008년 6월에 국제공동으로 몽골 알타이 산맥의 참바가라브산에서 시추한 40.2 m 길이의 빙하코어를 활용하였다. 빙하코어의 기초 프록시인 시각적 층위구분과 ECM 측정은 1차 절삭한 빙하코어의 절단면에서 수행하였으며, 2차 절삭과정을 통해 물 안정동위원소 분석용 시료 1,935개와 화학적 프록시 분석을 위한 시료 374개를 확보하였다. 전체 빙하코어의 시각적 층위구분 결과 총 29개의 불용성 입자층이 관찰되었으며, ECM 측정으로 11개의 ECM 신호 피크를 찾아냈다. 극지연구소에서 제작한 용융장치를 활용하여 분석한 $SO_4{^{2-}}$ 및 $Cl^-$의 농도와 상부 0.7 m와 1.2 m 깊이의 ECM 신호 피크의 비교 결과는 이들 ECM 신호 피크가 러시아 캄차카반도의 Kliuchevskoi 화산 분출과 연관된 것을 보여준다. 이러한 결과는 극지연구소에서 자체 제작한 ECM 측정 시스템으로 분석한 ECM 자료의 신뢰성이 높다는 것을 나타낸다. 마지막으로 참바가라브 빙하코어의 상부 5 m에서 분석한 물 안정동위원소비의 변화는 뚜렷한 계절 주기성을 보이고 있고, 이 결과는 참바가라브 빙하코어의 화학적 프록시 기록이 후퇴적과정에 의해 크게 교란되지 않았다는 것을 지시한다. 본 연구에서 확립한 빙하시료 전처리 방법 설정과 기초 프록시 분석 기술은 앞으로 우리나라가 독자적으로 남북극 및 고산지역에서 시추하는 빙하코어에 적용하여 다양한 고기후 및 고환경 연구에 활용될 것이다.

• International Journal of Industrial Entomology and Biomaterials
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• 제13권1호
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• pp.23-30
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• 2006

BmCu/Zn SOD was isolated from early embryo of Bombyx mori using microarray analysis. The BmCu/Zn SOD gene was observed during the early embryonic stage with the strongest signal found at the unfertilizaion, fertilization and blastoderm stages. The BmCu/Zn SOD gene encodes a protein of 154 amino acids with a calculated Mr of 15 kDa. The deduced amino acid sequence of BmCu/Zn SOD indicated that the residues that form on the Cu/Zn binding site are conserved and that the sequence is a 60% identity to that of M. domestica. In a phylogenetic tree, Bm SOD was also close to Drosophila SODs rather than other insect SODs. The BmCu/Zn SOD gene exists as a single copy in the genome. Transcripts of BmCu/Zn SOD cDNA were identified by northern blot analysis. The expression of the BmCu/Zn SOD gene was observed weakly in most of larvae, pre-pupae, pupae and adult tissues. Also, the BmCu/Zn SOD gene was observed in early embryonic stage. Although the roles of SODs remains to be further elucidated, the high expression of BmCu/Zn SOD gene at before 24 h post fertilization suggests that this gene is of general importance during early embryogenesis in the Bombyx mod.

• International Journal of Industrial Entomology and Biomaterials
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• 제13권1호
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• pp.31-35
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• 2006

The ubiquitin conjugating enzyme 2 (E2) is core component of ubiquitin proteasome pathway (UPP) which represents a selective mechanism for intracellular proteolysis in eukaryotic cells. The E2 has been implicated in the intracellular transfer of ubiquitin to target protein. We show here the involvement of E2 in antiviral immune of Bombyx mori to Bombyx mori nuclear polyhedrosis virus (BmNPV). In this study, mRNA fluorescent differential display PCR (FDD-PCR) was performed with BmNPV highly resistant silkworm strain NB and susceptible silkworm strain 306. At 24 h post BmNPV infection, FDD-PCR with the arbitrary primer AP34 showed that one cDNA band was down-regulated in the midgut of resistant strain, but highly expressed in susceptible strain. The deduced amino acid sequence of this cDNA clone share 99% identity with the recently published B. mori ubiquitin conjugating enzyme E2 (Genbank NO: DQ311351). Fluorescent quantitative PCR corroborated down regulation of E2 in resistant strain. We there conclude that BmNPV infection evokes strong response of susceptible strain including activation of UPP. BmNPV may evolve escape mechanisms that manipulate the UPP in order to persist in the infected host. In addition, the identification of down-regulation of E2 in resistant strain, as well as structure data, are essential to understanding how UPP operates in silkworm antiviral immune to BmNPV disease.

• 현장농수산연구지
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• 제3권1호
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• pp.48-69
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• 2001

1997년 부터 한국농업전문학교에서 수집하여 재배되고 있는 마 (Dioscorea alata L.) 계통 중 품질이 우수하고 이용 가치가 기대되는 33개 계통에 대한 특성을 조사하였으며, 형태적 차이를 보이는 19개 계통에 대한 RAPD분석을 실시하였다. 1. 주당 괴경의 전체 무게는 최대 2,147g (No.36), 최소 90g (No.20)으로 평균 610g이었다. 주당 평균 괴경수는 2.8개였으며 최대 4.7개, 최소 1.3개였다. 괴경중은 평균 363g이었으며 최대 1200g, 최소 70g이었다. 2. 괴경의 육질은 백색, 담황색 및 적자색 3가지 패턴을 보였으며, 잎은 녹색, 진녹색 및 담녹색으로 분류되었다. 3. RAPD 분석에 사용된 총 113개 primers 중 12개 primer 만이 모든 분류군에서 증폭되었다. 이를 통하여 93개의 밴드를 얻었으며 69개 밴드는(71.0%) polymorphic 하게 나타났다. 4. 유집분석 결과 19개 계통은 유사도 지수 값 0.66~0.90의 범위로 나타났으며, 크게 2개의 그룹, 즉 인도네시아와 가고시마에서 도입된 8개의 계통이 포함된 그룹과, 유사도지수 0.70~0.90의 범위를 갖는 Nauru, Palau Is., Okinawa와 Papua New Guinea에서 도입된 11 계통이 포함된 그룹으로 대별되었다.