• Title/Summary/Keyword: Liliaceae

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Plant Virome Analysis by the Deep Sequencing of Small RNAs of Fritillaria thunbergii var. chekiangensis and the Rapid Identification of Viruses

  • Chen, Lu-xi;Pan, Hang-kai;Tao, Yu-tian;Yang, Dang;Deng, Hui-min;Xu, Kai-jie;Chen, Wen-bin;Li, Jun-min
    • The Plant Pathology Journal
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    • v.38 no.5
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    • pp.533-540
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    • 2022
  • Thunberg fritillary (Fritillaria thunbergii), a perennial used in traditional Chinese herbal medicine, is a members of the family Liliaceae. The degeneration of germplasm is a severe problem in the production of Fritillaria thunbergii var. chekiangensis. However, no information about viral infections of F. thunbergii var. chekiangensis has been reported. In this study, we sequenced the small RNAs of F. thunbergii var. chekiangensis from leaves and bulbs, and viruses were identified using a phylogenetic analysis and BLAST search for sequence. In addition, multiplex reverse transcriptase-polymerase chain reaction (RT-PCR) was used to rapidly detect viruses in this variety. Our study first reported that five viruses infected F. thunbergii var. chekiangensis. Among them, fritillary virus Y (FVY), lily mottle virus (LMoV), Thunberg fritillary mosaic virus (TFMV), and hop yellow virus (HYV) had been reported in F. thunbergii, while apple stem grooving virus was first reported in the genus Fritillaria. A multiplex RT-PCR method was developed to rapidly test the four viruses FVY, LMoV, TFMV, and HYV in F. thunbergii var. chekiangensis. Our results provide a better understanding of the infection of F. thunbergii var. chekiangensis by viruses and a basic reference for the better design of suitable control measures.

Restoration Model of Evergreen Broad-leaved Forests in Warm Temperate Region(IV) - Vegetation Structure of the Case Study Areas - (난대 기후대의 상록활엽수림 복원 모형(IV) - 사례지의 식생구조 -)

  • 오구균;김용식
    • Korean Journal of Environment and Ecology
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    • v.11 no.3
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    • pp.334-351
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    • 1997
  • To study restoration model of evergreen broad-leaved forests in warm temperate region, vegetation structure was studied at Wando(Island) as a case study. Quercus acuta was a dominant species at evergreen broad-leaved forests in Wando(Island). Majority of evergreen broad-leaved forests was a thirty years old coppice forest. Reforested vegetation and deciduous broad-leaved forests was developed at a mid-slope districts and a piedmont. Deciduous broad-leaved forestsconsisted of Quercus serrata, Carpinus tschonoskii, Carpinus coreana, etc., was developed at a ridge and higher districts. Evergreen broad-leaved woody plants were growing at a forest floor of deciduous broad-leaved forests. The species over sixty percent of constanty ratio in forty seven plots were Ligustrum japonicum, Trachelospermum asiaticum var. intermedium, Quercus acuta and Eury japonica. The vascular plants in the Wando(Island) was summarized as 488 taxa which composed as 101 families, 321 genus, 426 species, 56 varieties, 5 forms and 1 hyvrid. Evergreen broad-leaved woody stecies was 32 taxa which composed as 23 genus, 30 species and 2 varieties. The species such as Liliope platyphylla of Liliaceae and Pueraria thunbergii of Leguminosae, etc. was recorded as the highest values for their widely distribution in the areas. On the contrary, and forty taxa of plants such as Viburnum erosum of Caprifoliaceae, Traceholospermum asiaticum var. intermedium was recorded as over 50% of constancy ratio. Two hundred and nine taxa of plants such as Juglans manshurica of Juglandaceae, Cornus walteri of Cornaceae and Rodotypos scandens of Rosaceae, etc. was showed the specific trends due to long-term artificial disturbance. The forest of Pinus thunbergii showde the highest species diversities(155 species per 600m$^{2}$), while the Cinnamomum japonicum-Tracheolospermum asiaticum var. intermedium community showed the lowest species diversities(23 species per 600m$^{2}$).

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Antioxidant activity and protective effects on oxidative DNA damage of Smilax china root (토복령의 항산화 및 산화적 DNA 손상억제 활성)

  • Jang, Tae-Won;Oh, Chang-Gun;Park, Jae-Ho
    • Journal of Applied Biological Chemistry
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    • v.61 no.2
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    • pp.109-117
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    • 2018
  • Recently, cancer incidence in modern society is increasing sharply. DNA damage is caused by intrinsic or extrinsic factors in the human body, cells protect themselves by defense mechanism against DNA damage. Also, Aberrant DNA and deficient DNA repair are closely associated with various diseases, including aging and cancer. Researchers are interested in search for proper materials to inhibition for DNA damage. As knew the side effects of synthetic antioxidant, some researches have been conducted about cancer prevention materials derived from nature. Root of Smilax china, in Liliaceae, is used detoxification and tumor treatments traditionally. However, studies on the inhibitory effect of DNA damage haven't progressed. In this study, antioxidant activity and protective effects on oxidative DNA damage of S. china root were confirmed, relationship between those activities and contents of phenolic compounds in plants were established. S. china root effectively removed 1,1-diphenyl-2-picryl-hydrazyl radicals and 2,2'-azino-bis(3-ethylbenzothiazoline-6-sulphonic acid radicals. The quantification and identification of phenolic compounds were confirmed by high performance liquid chromatography analysis, its antioxidant activity was associated with some phenolic compounds. In addition, protective effects against hydroxyl radicals and ferrous ion-induced oxidative DNA damage were confirmed in plasmid DNA. In the cellular levels, S. china root suppressed the expression of ${\gamma}$-H2AX and p53 protein in NIH 3T3. Besides, S. china root suppressed H2AX and p53 mRNA levels. In conclusion, S. china root had the effect on DNA protection and antioxidant.

Protective Effects of Hemerocallis Fulva Extracts on Amyloid $\beta$-Protein-Induced Death in Neuronal Cells (아밀로이드 베타 단백질에 의해 유도된 신경세포 독성에 대한 원추리의 억제 효과 탐색)

  • Kim Eun-Sook;Choi Soo-Jin;Ryu Beung-Ho;Choi Jin-Ho;Oh Myung-Sok;Park Woo-Jin;Choi Young-Whan;Paik Do-Hyeon;Ha Kwon-Chul;Kang Dae-Ook;Cho Yong-Kweon;Park Ki-Tae;Moon Ja-Young
    • The Journal of Korean Medicine
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    • v.27 no.2 s.66
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    • pp.122-133
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    • 2006
  • Objectives : The amyloid $\beta$-protein ($A\beta$) is the principal component of the senile plaques characteristic of Alzheimer's disease (AD) and elicits a toxic effect on neurons in vitro and in vivo. Many environmental factors including antioxidants and proteoglycans modify $A{\beta}toxicity$. In this study, we have investigated the protective effects of water- and organic solvent-extracts of Hemerocallis fulva root fractions pre-extracted with methanol on $A\beta$-induced oxidative cell death in cultured rat pheochromocytoma (PC12) cells. Methods : For this study, we used MTT reduction assay for detection of protective effects of water- and organic solvent-extracts of Hemerocallis fulva root fractions pre-extracted with methanol on $A{\beta}_{25-35}$-induced cytotoxicity to PC12 cells. We also used cell-based $\beta$-secretase assay system to investigate the inhibitory effect of water- and organic solvent-extracts of Hemerocallis fulva root on $\beta$-secretase activity. Results : We previously reported that methanol extracts of Hemerocallis fulva root strongly attenuated cytotoxicity induced by the three $A\beta$ fragments ($A{\beta}_{25-35},\;A{\beta}_{1-42}\;A{\beta}_{1-43}$) to both SK-N-MC and PC12 cells. In the present study, we found that butanol-, ethylacetate-, chloroform-, and water-extracts of Hemerocallis fulva root fractions pre-extracted with methanol had strong protective effects against $A{\beta}_{25-35}$-induced cytotoxicity to PC12 cells and inhibitory potency to $\beta$-secretase activity. Conclusion : These results suggest that butanol-, ethylacetate-, chloroform-, and water-extracts of Hemerocallis fulva root fractions pre-extracted with methanol may contain the protective component(s) against $A\beta$-induced cell death in PC12 cells as well as inhibitory component(s) to $\beta$-secretase activity.

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Evaluation of Antimicrobial, Antithrombin, and Antioxidant Activity of Fritillaria thunbergii Miquel (패모(Fritillaria thunbergii Miquel)의 항균,항혈전 및 항산화 활성 평가)

  • Shin, Yong-Kyu;Jang, Han-Su;Kim, Jee-In;Sohn, Ho-Yong
    • Journal of Life Science
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    • v.19 no.9
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    • pp.1245-1250
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    • 2009
  • Beimu (Fritillaria thunbergii Miquel), a bulbous plant of Liliaceae found in Korea, Japan and China, has been used as an antitussive and expectorant agent, and is also useful in alleviating stonsillitis and bronchiolitis. Most researches have been focused on micro-propagation and plant regeneration, component analysis, and dormancy relieving of beimu. Reports regarding the biological activity of beimu, such as anti-Helicobacter pyroli or platelet aggregation inhibition activity, are few and not widely available. In this study, methanol extract and its organic solvent fractions were prepared from Fritillaria thunbergii Miquel and their antimicrobial, antithrombin, and antioxidant activities were evaluated, respectively. The methanol extract contained lots of water-soluble materials (58.98%) and hexane-soluble oils (14.85%). The ethylacetate and butanol fraction at $500{\mu}g$/disc concentration showed strong antibacterial activity against tested bacteria, except Escherichia coli. Antifungal activity was not observed in methanol extract and its fractions. The hexane, ethylacetate and butanol fractions showed strong antithrombin activity at 4.8 mg/ml concentration. Especially, the ethylacetate fraction showed 95.4 sec of thrombin time at a concentration of 1.2 mg/ml, which is comparable to aspirin, a widely used antithrombosis agent. For antioxidation activity, the ethylacetate and butanol fraction showed good 1,1-diphenyl-2-picryl hydrazyl scavenging activity ($IC_{50}$ of $344{\sim}368{\mu}g$/ml). In superoxide dismutase-like activity and reducing power, the fractions showed $20{\sim}25%$ of vitamin C, and $51{\sim}54%$ of butyl hydroxytoluene, respectively.

Callus induction and in vitro plant regeneration of Polygonatum stenophyllum Maxim. (층층둥굴레(Polygonatum stenophyllum Maxim.)의 캘러스 유도 및 기내 식물체 분화)

  • Park, Min Wan;Ryu, Shi Hyun;Lee, Yoon Young;Song, Jae-Mo;Kim, Jin Ho;Ahn, Young-Hee;Bae, Kee Hwa
    • Journal of Plant Biotechnology
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    • v.45 no.3
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    • pp.266-272
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    • 2018
  • A Polygonatum stenophyllum Maxim. is an important endangered plant belonging to the family Liliaceae. A method was developed for the rapid micropropagation of P. stenophyllum through plant regeneration from rhizome (1-year, 3-years, and 5-years) explant-derived calli. The rhizome segments were cultured in Murashige and Skoog (MS) medium supplemented with varying concentrations of 2,4-D (0, 0.5, 1.0, $1.5mg{\cdot}L^{-1}$) for callus induction. In media supplemented with $0.5mg{\cdot}L^{-1}$ of 2,4-D, 87% of 3-years rhizome produced callus. Subsequently, the callus was transferred to 1/2MS medium supplemented with various concentrations of IAA, IBA, NAA, and 2,4-D (0, 0.1, 0.5 and $1.0mg{\cdot}L^{-1}$) for adventitious shoot formation. The highest percentage of adventitious shoot induction (57%) was observed in 1/2MS medium containing $0.5mg{\cdot}L^{-1}$ of NAA. Elongation of the adventitious shoot was achieved in 1/2MS medium supplemented with $0.1mg{\cdot}L^{-1}$ of BA. Rooting was achieved in 1/2MS medium without any hormones. It is hypothesized that the stated in vitro propagation protocol will be useful for conservation and mass propagation of the endangered Polygonatum stenophyllum Maxim. for bioresources.

Inhibitory Effects of Allium sacculiferum Max. Methanol Extracts on ROS Production and Lipid Accumulation during Differentiation of 3T3-L1 Cells (참산부추(Allium sacculiferum Max.) 메탄올 추출물의 지방세포 내 ROS 생성 및 지질 축적 억제 효능)

  • Choi, Hye-Young;Kim, Gun-Hee
    • Journal of the Korean Society of Food Science and Nutrition
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    • v.43 no.6
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    • pp.822-828
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    • 2014
  • Allium sacculiferum Max. (ASM) is a perennial plant of the Liliaceae family and grows over the entire regions of Korea. Obesity is a serious health problem worldwide and has currently become a prevalent chronic disease. Adipocytes produced by preadipocyte differentiation during adipogenesis and adipocytes combined with abnormal accumulation cause obesity. Recently, intracellular reactive oxygen species (ROS) were shown to accelerate lipid accumulation in 3T3-L1 cells. In this study, we investigated the effects of ASM methanol extracts on ROS production and lipid accumulation in 3T3-L1 adipocytes. Our results indicate that the 1,1-diphenyl-2-picrylhydrazyl radical scavenging activity of ASM methanol extracts increased in a dose-dependent manner. ASM methanol extracts suppressed ROS production and lipid accumulation during adipogenesis. In addition, ASM methanol extracts inhibited the mRNA expression of both pro-oxidant enzymes such as glucose-6-phosphate dehydrogenase as well as the transcription factors, including sterol regulatory element-binding proteins 1c, peroxisome proliferator-activated receptor ${\gamma}$, and CCAAT/enhancer-binding protein ${\alpha}$. Our results suggest that ASM methanol extracts inhibit ROS production and lipid accumulation by controlling ROS regulatory genes and adipogenic transcription factors. Thus, ASM has potent natural antioxidant, anti-adipogenic properties and have potential in the development of a potent anti-obesity agent.

Characteristics of reproductive effect and phenology of Polygonatum stenophyllum grown in riverside in Paju-si (파주시 하천변에 서식하는 층층둥굴레의 계절학과 번식생태학적 특성)

  • Kim, Eui-Joo;Hong, Yong-Sik;Park, Jae-Hoon;Lee, Soo-In;Lee, Eung-Pill;Lee, Seung-Yeon;You, Young-Han
    • Journal of Wetlands Research
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    • v.22 no.2
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    • pp.73-80
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    • 2020
  • Polygonatum stenophyllum Maxim. is a native perennial herb to Korea belonging to family Liliaceae. Although it was removed from the endangered species list, since it inhabits the riverside, it has been threatened with damage to its populations due to frequent disturbances. In order to reveal the basic ecological characteristics of P. stenophyllum, This study was identified the life cycle of the aboveground part and was measured the number of flowers and fruits, which are reproductive organs of P. stenophyllum in riverside in Paju - si during the two years. As a result, aboveground part of P. stenophyllum appeared and grew rapidly until the end of May to about 1m. In early May, two buds per one peduncle were formed up to six pairs per floor. The flowers bloomed in turn from the base of the stem and to the top floor and the blooming occurred when the number of leaves was at least three. Fruits were formed in mid-June and matured by the end of September. The numbers of flowers and fruits were revealed that flowers bloomed in turn from the bottom of the stem to the top floor, the most intensively bloomed in the center part of the stem, and did not bloom from the floor closest to the ground and above the highest 5th node. This basic ecological characteristics of the P. stenophllyum grown in riverside identified in this study will be useful as basic data for their conservation.

The Paleovegetation at Dongdo of Is. Dokdo, Korea (한국 독도 동도의 고식생)

  • Yoon, Soon-Ock;Hwang, Sangill
    • Korean Journal of Plant Taxonomy
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    • v.38 no.4
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    • pp.583-599
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    • 2008
  • Dokdo, small island located in the eastern end of the Korean Peninsula, has been an uninhabited island for long time due to long distance from the land. Moreover, the steep slope of volcanic tuff at Dokdo is well drained for high permeability and Dokdo has few plain areas, swamps and very thin soil layers. In this study, pollen analysis at Dokdo was attempted on the profile of organic sandy soil for the first time in Korea owing to the marine climate environment with high humidity and precipitation including snowfalls in spite of unprofitable condition geologically or geomorphologically. While many historical, political researches have been accumulated for territorial problem of Dokdo with Japan, natural scientific researches with field work are not sufficient, and few paleoecological researches have been done. As a result of pollen analysis, the ratio of the NAP(Non-Arboreal Pollen) and spore was higher than AP(Arboreal Pollen), and the vegetation change existed by showing dramatic decrease of AP at the upper layer. AP was composed of almost Pinus, and a little Alnus, Quercus, Betula, Carpinus, Picea and Ulmus. NAP was composed of Gramineae, Compositae, Chenopodiaceae Cyperaceae, Caryophyllaceae, Liliaceae, Umbelliferae, Artemisia, Lobelia, Rumex, Polygonum. Increase of the NAP such as Gramineae, Artemisia and Chenopodiaceae, they would mostly have been transported from the other areas because agricultural activity is impossible at Dokdo. While one reason of Pinus thunbergii decrease could be regarded as environmental change, the other reason would be lumbering of pine trees by human activity which is adapted to Dokdo environment.

Biological Control of Soil-borne Diseases with Antagonistic Bacteria

  • Kim, Byung-Ryun;Hahm, Soo-Sang;Han, Kwang-Seop;Kim, Jong-Tae;Park, In-Hee
    • 한국균학회소식:학술대회논문집
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    • 2016.05a
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    • pp.25-25
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    • 2016
  • Biological control has many advantages as a disease control method, particularly when compared with pesticides. One of the most important benefits is that biological control is an environmental friendly method and does not introduce pollutants into the environment. Another great advantage of this method is its selectivity. Selectivity is the important factor regarding the balance of agricultural ecosystems because a great damage to non target species can lead to the restriction of natural enemies' populations. The objective of this research was to evaluate the effects of several different bacterial isolates on the efficacy of biological control of soil borne diseases. White rot caused by Sclerotium cepivorum was reported to be severe disease of garlic and chive. The antifungal bacteria Burkholderia pyrrocinia CAB08106-4 was tested in field bioassays for its ability to suppress white rot disease. In field tests, B. pyrrocinia CAB08106-4 isolates suppressed white rot in garlic and chive, with the average control efficacies of 69.6% and 58.9%, respectively. In addition, when a culture filtrate of B. pyrrocinia CAB08106-4 was sprayed onto wounded garlic bulbs after inoculation with a Penicillium hirstum spore suspension in a cold storage room ($-2^{\circ}C$), blue mold disease on garlic bulbs was suppressed, with a control efficacy of 79.2%. These results suggested that B. pyrrocinia CAB08106-4 isolates could be used as effective biological control agents against both soil-borne and post-harvest diseases of Liliaceae. Chinese cabbage clubroot caused by Plasmodiophora brassicae was found to be highly virulent in Chinese cabbage, turnips, and cabbage. In this study, the endophytic bacterium Flavobacterium hercynium EPB-C313, which was isolated from Chinese cabbage tissues, was investigated for its antimicrobial activity by inactivating resting spores and its control effects on clubroot disease using bioassays. The bacterial cells, culture solutions, and culture filtrates of F. hercynium EPB-C313 inactivated the resting spores of P. brassicae, with the control efficacies of 90.4%, 36.8%, and 26.0%, respectively. Complex treatments greatly enhanced the control efficacy by 63.7% in a field of 50% diseased plants by incorporating pellets containing organic matter and F. hercynium EPB-C313 in soil, drenching seedlings with a culture solution of F. hercynium EPB-C313, and drenching soil for 10 days after planting. Soft rot caused by Pectobacterium carotovorum subsp. carotovorum was reported to be severe disease to Chinese cabbage in spring seasons. The antifungal bacterium, Bacillus sp. CAB12243-2 suppresses the soft rot disease on Chinese cabbage with 73.0% control efficacy in greenhouse assay. This isolate will increase the utilization of rhizobacteria species as biocontrol agents against soft rot disease of vegetable crops. Sclerotinia rot caused by Sclerotinia sclerotiorum has been reported on lettuce during winter. An antifungal isolate of Pseudomonas corrugata CAB07024-3 was tested in field bioassays for its ability to suppress scleritinia rot. This antagonistic microorganism showed four-year average effects of 63.1% of the control in the same field. Furthermore, P. corrugata CAB07024-3 has a wide antifungal spectrum against plant pathogens, including Sclerotinia sclerotiorum, Sclerotium cepivorum, Botrytis cinerea, Colletotrichum gloeosporioides, Phytophotra capsici, and Pythium myriotylum.

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