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Diversity of Leuconostocs on Garlic Surface, an Extreme Environment

  • KIM, MYUNG HEE;SUN TAEK SHIM;YOUN SOON KIM;KYU HANG KYUNG
    • Journal of Microbiology and Biotechnology
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    • v.12 no.3
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    • pp.497-502
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    • 2002
  • Thirty-nine strains of Leuconostocs found to be tolerant to $10\%$ or more garlic were selected for further identification, by comparing their whole-cell protein pattern, 16S rRNA gene (first 530 bases) sequence, cellular fatty acid composition, and carbon source metabolism. Two isolates were Identified as Leuconostoc mesenteroides and 32 others as Leuconostoc citreum. Five other strains belonging to a cluster could not be allocated to the existing species. 16S rRNA gene sequence and cellular fatty acid composition of the unidentified bacteria exhibited close similarity with Leuconostoc argentinum. The unidentified isolates were not allocated to L. argentinum, because they formed polysaccharide from sucrose, while L. argentinum strains do not. Leuconostocs tolerant to high concentration of garlic were found predominantly on garlic surface, an extreme environment which is unfit for most of other microorganisms.

New Dictyostelid in Mt. Surak, Korea;Dictyostelium valenstemmum sp. nov. (한국산 세포성 점균의 신종 : Dictyostelium valenstemmum sp. nov.)

  • 심규철;장남기
    • Asian Journal of Turfgrass Science
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    • v.10 no.2
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    • pp.117-124
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    • 1996
  • One new cellular slime mold, Dicivostelium valenstemmun sp. n. Shim et Chang, is isolated from the fermentation layer of soils in the cool temperate forests of Surak mountain, Korea. This species has the sori and sorophore yellow-pigmented, and sparse or irregular branches. And it is characterized by tall and robust sorocarps, well-form basal disks, mucoroides-type aggregations and large spores. This species has sorophores gradually tapering from bases to tips, simple capi- tate sorophore tips and conical bases. When prostrates on the plates, it has sparsely clavate bases. Spores are considerably large, 6.8~9.9 x 3.4~5.1 $\mu$m(avg. 8.5 x 4.1 $\mu$m), L /W index l.84~2.43(avg. 2.07) without polar granules. Key words: Diccyostelium valeustemmum, Cool temperate forests, Surak mountain.

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Identification of QTLs Affecting Physical Traits of Cooked Rice

  • Kang, Hyeon-Jung;Cho, Yong-Gu;Lee, Young-Tae;Kim, Young-Doo;Eun, Moo-Young;Shim, Jae-Uk
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.44 no.1
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    • pp.70-73
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    • 1999
  • This study was conducted to ascertain the chromosomal locations and effect of quantitative trait loci (QTL) associated with the physical traits of rice (Oryza sativa L.) eating quality. One hundred sixty four recombinant inbred lines (MGRILs) of F$_{11}$ were derived from the cross between Milyang 23 (Tongil type) and Gihobyeo (japonica type). They were evaluated for six physical traits of cooked rice. Transgressive segregation was observed for all examined traits. Significant QTL were detected (LOD$\geq$2.0) in three traits, including single QTL for adhesiveness, gumminess, and chewiness of cooked rice, respectively. Phenotypic variation explained by each QTL ranged from 6.3% to 14.6%. However, no significant QTL was detected for hardness, cohesiveness, and elasticity of cooked rice. Pleiotropic effects of single QTL on different traits are observed.d.

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Analysis of Technology Association Rules Between CPC Codes of the 'Internet of Things(IoT)' Patent (CPC 코드 기반 사물인터넷(IoT) 특허의 기술 연관성 규칙 분석)

  • Shim, Jaeruen
    • The Journal of Korea Institute of Information, Electronics, and Communication Technology
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    • v.12 no.5
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    • pp.493-498
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    • 2019
  • This study deals with the analysis of the technology association rules between CPC codes of the Internet of Things(IoT) patent, the core of the Fourth Industrial Revolution ICT-based technology. The association rules between CPC codes were extracted using R, an open source for data mining. To this end, we analyzed 369 of the 605 patents related to the Internet of Things filed with the Patent Office until July 2019, with a complex CPC code, up to the subclass-level. As a result of the technology association rules, CPC codes with high support were [H04W ${\rightarrow}$ H04L](18.2%), [H04L ${\rightarrow}$ H04W](18.2%), [G06Q ${\rightarrow}$ H04L](17.3%), [H04L ${\rightarrow}$ G06Q](17.3%), [H04W ${\rightarrow}$ G06Q](9.8%), [G06Q ${\rightarrow}$ H04W](9.8%), [G06F ${\rightarrow}$ H04L](7.9%), [H04L ${\rightarrow}$ G06F](7.9%), [G06F ${\rightarrow}$ G06Q](6.2%), [G06Q ${\rightarrow}$ G06F](6.2%). After analyzing the technology interconnection network, the core CPC codes related to technology association rules are G06Q and H04L. The results of this study can be used to predict future patent trends.

Characterization of Optimum Conditions Affecting on Multi-Color Dyeing of Cut Rose (Rosa hybrida 'Akito') (절화장미(Rosa hybrida 'Akito') 복색염색에 미치는 몇 가지 요인의 최적조건 구명)

  • Shim, Sung Im;Nam, Jin Soo;Kim, Hong Yul;Lim, Ki Byung
    • FLOWER RESEARCH JOURNAL
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    • v.19 no.2
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    • pp.110-114
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    • 2011
  • This experiment was conducted to examine the ideal condition for multiple colors dyeing of cut rose, 'Akito'. Four different colors of dye were applied to make multiple flower colors in cut rose by absorption method. Acidic condition around pH 3.5 showed the fastest absorption speed in all four colors. There is no difference at each pH levels, at part of leaves dyeing, it is more affected colors rather than pH levels in purple and blue colors. From vary concentration of each dyes, $10g{\cdot}L^{-1}$ concentration of dyeing solution gave the best color definition. But it's not significant and result was different by each color in a same concentration. 10 minutes of dyeing performed pastel color and 30 minutes performed the best color definition, but the 30 minutes treatment accompanied with significant dyeing on the leaves also. As a result of this experiment, optimum condition for dyeing cut rose, 'Akito' requires pH 3.5, $5-10g{\cdot}L^{-1}$ of dye concentration and 10-30 minutes treatment.

Effect of pH on UV Photodegradation of N-Nitrosamines in Water (수용액상 니트로스아민의 UV 광분해에서 pH 영향)

  • Shim, Jae-Goo;Aqeel, Afzal;Choi, Bo-Mi;Lee, Jung-Hyun;Kwak, No-Sang;Lim, Ho-Jin
    • Journal of Korean Society on Water Environment
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    • v.32 no.4
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    • pp.357-366
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    • 2016
  • N-nitrosamines are a class of carcinogenic chemicals that can pose significant hazards to the human life. Ultraviolet (UV) light irradiation is considered as one of the effective methods to reduce N-nitrosamines in the aqueous phase. This study aimed to investigate the pH influence on UV photodegradation of N-nitrosamines (i.e., N-nitrosodibutylamine (NDBA) and N-nitrosopyrrolidine (NPYR)) closely related to water treatment. Photodegradation rate constants of NDBA and NPYR remained between 3.26×10-2 L/W-min to 5.08×10-3 L/W-min and 1.14×10-2 L/W-min to 2.80×10-3 L/W-min at pH2-10, respectively. This study also focused on the formation of oxidized products (i.e., primarily NO2- and NO3-). Under slightly acidic and neutral conditions, NO2- formation was more prevalent than NO3- formation, while under strong acidic conditions, NO3- was more prevalent. There was no significant change in total organic carbon (TOC) and total nitrogen (TN), suggesting negligible loss of N-nitrosamines and degradation products from the system. NDBA was easily photodegraded than NPYR. This study also demonstrated that a lower pH is a favorable condition for photolytic degradation of N-nitrosamines in water.

Evaluation of Bacteriological Safety for the Shellfish growing Sea waters in Seocheon Area, Korea (충남 서천 패류생산해역에서의 세균학적 위생안전성 평가)

  • Byun, Han-Seok;Song, Ki-Cheol;Lee, Doo-Seog;Shim, Kil-Bo;Lim, Chi-Won
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.43 no.1
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    • pp.25-32
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    • 2010
  • A Sanitary survey in an Important shellfish-growing area of Biin Bay in Seocheon-gun Korea, was conducted to evaluate bay conditions and compliance with the bacteriological criteria for areas designated for the production of shellfish for export. Seawater samples were collected monthly at 55 sampling stations established in the survey area from January 2006 to December 2008. Bacteriological water quality did not change in response to a small rainfall (10.0 mm), but it increased abruptly in response to rainfall to 62.5 mm The most probable number (MPN) value for total coliforms and fecal coliforms in 1, 980 seawater samples ranged from <1.8 to >1, 600 MPN/100mL and from <1.8 to 330 MPN/100mL, respectively. The geometric mean and estimated $90^{th}$ percentile value for total coliforms ranged from 2.0 to 10.3 MPN/100mL and from 7.0 to 42.6 MPN/100mL respectively. The geometric mean and estimated percentile value for fecal coliforms ranged from 1.8 to 4.0 MPN/100mL and from 1.9 to 18.3 MPN/100mL, respectively. Accordingly, the bacteriological water quality of Biin Bay met the National Shellfish Sanitation Program (NSSP) and Korea Shel1fish Sanitation Program(KSSP) criteria for areas designated for shellfish production for export in Korea.

EMG Analysis for Investigation Muscle-Collaborated Relationship during Golf Swing (골프스윙시 근육협응관계 구명을 위한 EMG 분석)

  • Shim, Tae-Yong;Shin, Seong-Hyu;Oh, Seung-Il;Mun, Jung-Hwan
    • Korean Journal of Applied Biomechanics
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    • v.14 no.3
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    • pp.177-189
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    • 2004
  • Kinematic and kinetic analysis using 3D Motion Capture system are common, yet there is little in the literature that discuss the relationship and coactivity between muscles during the golf swing. The purpose of this study was to describe the relationship between the employed 16 muscles during golf swing. We could observe 3 muscle patterns such as 'Line' shape, 'L' shape, and 'Loop' shape for the golf swing activity. The 'Line' shape indicates that two muscles act almost perfectly in phase, and the 'L' shape represents that two muscles act in a reciprocating manner(When one is active, the other is quiescent and vice versa). And the 'Loop' shape indicates that two muscles act sequently(After one is active, the other act). In these results, we knew the muscle patterns during golf swing is similar to the patterns during gait. And we presented it was possible to show the consistence of golf swing through the frequency analysis of muscle patterns. We believe that the results potentially useful for the golf players and coaches to analyze their performance.

LIN-23, an E3 Ubiquitin Ligase Component, Is Required for the Repression of CDC-25.2 Activity during Intestinal Development in Caenorhabditis elegans

  • Son, Miseol;Kawasaki, Ichiro;Oh, Bong-Kyeong;Shim, Yhong-Hee
    • Molecules and Cells
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    • v.39 no.11
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    • pp.834-840
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    • 2016
  • Caenorhabditis elegans (C. elegans) utilizes two different cell-cycle modes, binucleations during the L1 larval stage and endoreduplications at four larval moltings, for its postembryonic intestinal development. Previous genetic studies indicated that CDC-25.2 is specifically required for binucleations at the L1 larval stage and is repressed before endoreduplications. Furthermore, LIN-23, the C. elegans ${\beta}$-TrCP ortholog, appears to function as a repressor of CDC-25.2 to prevent excess intestinal divisions. We previously reported that intestinal hyperplasia in lin-23(e1883) mutants was effectively suppressed by the RNAi depletion of cdc-25.2. Nevertheless, LIN-23 targeting CDC-25.2 for ubiquitination as a component of E3 ubiquitin ligase has not yet been tested. In this study, LIN-23 is shown to be the major E3 ubiquitin ligase component, recognizing CDC-25.2 to repress their activities for proper transition of cell-cycle modes during the C. elegans postembryonic intestinal development. In addition, for the first time that LIN-23 physically interacts with both CDC-25.1 and CDC-25.2 and facilitates ubiquitination for timely regulation of their activities during the intestinal development.

Chiral [Iminophosphoranyl]ferrocenes: Synthesis, Coordination Chemistry, and Catalytic Application

  • Co, Thanh Thien;Shim, Sang-Chul;Cho, Chan-Sik;Kim, Dong-Uk;Kim, Tae-Jeong
    • Bulletin of the Korean Chemical Society
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    • v.26 no.9
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    • pp.1359-1365
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    • 2005
  • A series of new chiral [iminophosphoranyl]ferrocenes, {${\eta}^5-C_5H_4-(PPh_2=N-2,6-R_2-C_6H_3)$}Fe{${\eta}^5-C_5H_3-1-PPh^2-2-CH(Me)NMe_2$} (1: R = Me, $^iPr$), {${\eta}^5{-C_5H_4-(PPh_2=N-2,6-R_2}^1-C_6H_3)$}Fe{${\eta}^5-C_5H_3-1-(PPh_2=N-2,6-R_2-C_6H_3)-2-CH(Me)R_2$} (2: $R^1\;=\;Me,\;^iPr;\;R^2\;=\;NMe_2$, OMe), and $({\eta}^5-C_5H_5)Fe${${\eta}^5-C_5H_4-1-PR_2-2-CH(Me)N=PPh_3$} (3:R = Ph, $C_6H_{11}$) have been prepared from the reaction of [1,1'-diphenylphosphino-2-(N,N-dimethylamino) ethyl]ferrocene with arylazides (1 & 2) and the reaction of phosphine dichlorides ($R_3PCl_{2}$) with [1,1'-diphenylphosphino-2-aminoethyl]ferrocene (3), respectively. They form palladium complexes of the type $[Pd(C_3H_5)(L)]BF_4$ (4-6: L = 1-3), where the ligand (L) adopts an ${\eta}^2-N,N\;(2)\;or\;{\eta}^2$-P,N (3) as expected. In the case of 1, a potential terdentate, an ${\eta}^2$-P,N mode is realized with the exclusion of the –=NAr group from the coordination sphere. Complexes 4-6 were employed as catalysts for allylic alkylation of 1,3-diphenylallyl acetate leading to an almost stoichiometric product yield with modest enantiomeric excess (up to 74% ee). Rh(I)-complexes incorporating 1-3 were also prepared in situ for allylic alkylation of cinnamyl acetate as a probe for both regio- and enantioselectivities of the reaction. The reaction exhibited high regiocontrol in favor of a linear achiral isomer regardless of the ligand employed.