• Title/Summary/Keyword: K-mean cluster analysis

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Pathogenic Groups Identified Among Isolates of Rhynchosporium secalis

  • Arabi, Mohammad Imad Eddin;Al-Shehadah, Eyad;Jawhar, Mohammad
    • The Plant Pathology Journal
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    • v.26 no.3
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    • pp.260-263
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    • 2010
  • Scald, caused by Rhynchosporium secalis has been the major yield-reducing factor for barley production during the last decade. In this study, pathogenic groups of R. secalis were identified to obtain a global picture of the assembly of isolates involved in Syrian populations which is essential for the development of scald-resistant barley cultivars. To identify a number of pathogenic groups, 49 isolates collected over ten years from major barley growing areas in Syria were evaluated on five differential barley genotypes. Genotypes presented a continuous range of response from highly susceptible to moderately resistant, but none were immune to the disease. A cluster analysis placed isolates in six distinct differential pathogenic groups. Mean disease rating of 39.24% was the separation point between avirulent and virulent reactions. Isolate Rs46 exhibited distinct differential virulence patterns associated with high frequency across all genotypes. Hence, the data presented here provides crucial information for future selection of isolates to develop durable barley scald resistance.

Spacial Distribution of PM1.0 Major Compounds from Long Range Transport at the Baegryungdo Super Site: Relationship between PSCF and Cluster Analysis (백령도에서 관측된 장거리 유입 PM1.0의 주성분 공간 분포: PSCF 및 군집분석 관계)

  • Oh, Sea-Ho;Lee, Taehyoung;Park, Taehyun;Ahn, Joon-Young;Park, Jin-Soo;Choi, Jin-Soo;Park, Gyutae;Bae, Min-Suk
    • Journal of Korean Society for Atmospheric Environment
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    • v.33 no.4
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    • pp.411-423
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    • 2017
  • The spacial potential source contribution function (PSCF) method was utilized by considering topography and height of back trajectories based on the measurement of organic typo matter (OM), $NO_3{^-}$, $SO{_4}^{2-}$, and $NH_4{^+}$ at the Baegryungdo Super Site ($37^{\circ}57^{\prime}N$, $124^{\circ}37^{\prime}E$, 135 m a.s.l. (above sea level)) for three selected periods (i.e., January~April, May~August, and September~December) in 2013. The PSCF were calculated on the contributions of trans-boundary transport to the hourly mean concentrations using a high-resolution time-of-flight aerosol mass spectrometer (HR-ToF-AMS). The cluster analysis using back trajectories was performed to identify the major airflows to the sampling site. The upper atmosphere in the Tianjin area of China and the lower atmosphere in the western coast area of Korea can be the major source of trans-boundary pollution to the sampling site during January~April resulted from PSCF. The area in Lianyungang-city and Liaoning-sheng, China can be responsibile for the nitrogen related secondary compounds during May~August, and Shandong Peninsula in China is the major source area during September~December. In addition, relationships between the cluster analysis of back trajectories and PSCF were investigated for the statistically significance level for the source areas.

Relationship between Eating Style and Food Intake of Healthy Female College Students during Chuseok Holidays (추석기간 중 여대생의 섭식스타일과 식품 섭취와의 관련성)

  • Kim, Seok-Young
    • Korean Journal of Community Nutrition
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    • v.21 no.2
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    • pp.131-139
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    • 2016
  • Objectives: The present study was conducted to investigate associations between eating style and food intake of 45 female college students during Chuseok holidays. Methods: A ten-day food record was obtained and divided into two parts. The first five days (September 20-24, 2015) were considered as a 'Normal Day (ND 1-5)' and the subsequent five days (September 25-29) as 'Holiday (HD6-10)'. The middle three days (September 26-28) of the holidays were considered as the 'Peak Holiday (PD7- 9)'. Eating behaviors were measured using the Dutch Eating Behavior Questionnaire (DEBQ) and anthropometry was assessed in all study participants. Participants were grouped by cluster analysis according to the mean energy intake of the first three days of the Holiday. Results: Participants had a low-normal range of BMI and they were carefully restricting their food intake at Normal Day. Even the food intake did not exceed 2000 kcal per day during the Peak Holiday. External eating was the most prevalent type of eating behavior, followed by restrained eating and emotional eating. Normal energy and fat intake were correlated with the external eating subscale of the DEBQ. Restrained eating was associated with the weight, BMI, fat mass, waist, and hip girth of the subjects. Compared to the Normal Day, they overate during the Holiday with different eating styles including 'restraint', 'disinhibition', and 'fluctuation'. Therefore, neither eating behaviors nor anthropometry was associated with food intake during the Holiday. Although eating behaviors and anthropometric measures were not different among eating style clusters, the food intakes of disinhibition cluster were higher than those of restraint cluster during all the study periods. Conclusions: Subjects can be classified with the restraint, disinhibition, and fluctuation clusters. However, eating behaviors and anthropometry were not different among three clusters.

Prediction and Classification System for Temporal lobe Epilepsy (측두엽 간질 예측과 분류시스템)

  • Kim, Min-Soo;Seo, Hee-Don
    • Journal of Sensor Science and Technology
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    • v.13 no.3
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    • pp.199-206
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    • 2004
  • Epileptic seizures result from a temporary electrical disturbance of the brain. In this paper, a method of discriminating EEG for diagnoses of temporal lobe epilepsy is proposed. The proposed method for classification of epilepsy and sleep EEG is based on the wavelet transform and the fuzzy c-means. The magnitude and mean of wavelet coefficients for each EEG band are applied to the cluster of the FCM classifier. The proposed system show a little more accurate diagnosis for EEG by analysis of frequency for Wavelet and the success rate of 95% classification using FCM. From the simulation results by the implemented system, we demonstrated this research can be reduce doctor's labors and realize quantitative diagnosis of EEG.

A Study on the Lower Body Somatotype of the 20s' Women (20대 여성의 하반신 체형 관찰)

  • Lee, Youn-Soon;Ryu, Ji-Hyun
    • Journal of the Korea Fashion and Costume Design Association
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    • v.9 no.1
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    • pp.161-171
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    • 2007
  • The purpose of this study was to classify the lower body of the lost women and to investigate the three-dimensional characteristics of each lower body somatotype of them. The subject were ninety seven women whose. age were twenties and whose height and bust girth were in the range of mean$\pm1\delta$ of typical body size of twenties' Korean women. The forty one variables of their lower body were measured by Martin's Anthropometric Instrument. And they were analyzed for mean, standard deviations factor analysis, and cluster analysis. In the second phase of analysis, the three participants were re-selected in each type were measured by Sliding Guage and analyzed their lower body somatotype. The results were as follows; The components of lower body of 20s' women were extracted with 7 factors through factor analysis and orthogonal rotation by the method of Varimax. The rate of the cumulative contribution was 84.1% the first factor was the thickness of lower body, the second factor was the vertical size of lower body the third factor was the front shape of hip, the forth factor was the vertical size of hip, the fifth factor was the shape of abdomen, the six factor was the flat-ratio of waist and the seventh factor was flat-ratio of hip. The somatotype of 20's women's lower body can be classified into 3 types. Type 1 is the standard somatotype of 20's women's lower body and the 34.0% of the participants in the study was categorized into type 1. Type 2 is a short and corpulency type with protruded abdomen and hip and the 29.9% of the participants in the study was categorized into type 2. And the type 3 is a tall and thin type with plat abdomen and hip and the 37.1% of the participants was categorized into type 3.

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The Estimation of Climax Index for Broadleaved Tree Species by Analysis of Ecomorphological Properties (생태형태학적(生態形態學的) 특성(特性) 분석(分析)에 의한 활엽수종(闊葉樹種)의 극성상지수(極盛相指數) 추정(推定))

  • Kim, Ji Hong
    • Journal of Korean Society of Forest Science
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    • v.82 no.2
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    • pp.176-187
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    • 1993
  • Based on the analysis of ecomorphological characters for 84 tree and shrub species, climax indices were estimated so as to interpret the position of the successional sere for the species in the natural deciduous forest. Nineteen ecomorphological characters, considered to be associated with successional gradient in the forest, were selected for the study. One of 2 to 4 steps per character for each species was given on a standardized scale of increasing climaxness, and the index was computed by percent of the sum of the scoring values for total score. Calculated mean value of 54.2 for all indices. Carpinus laxiflora had the highest index value of 83.3, and Populus davidiana recorded the lowest of 18.8. The most climax group, greater than 70 of the index, contained only 9 species, intermediate group, between 40 to 70 of the index, had 58 species, and the most pioneer group, less than 40 of the index comprised 17 species. The result has noticed that the large number of species would take advantage of most diverse resource and niche in the intermediate stage of the sere in the forest. The three components, i.e., light absorption, reproduction, and wood quality were used as axes for a 3-dimensional projection of the relative position for 44 species by principal component analysis. Along the similar ecomorphological characters, four recognized species group were classified by cluster analysis. The distribution pattern of plant families on the index gradient showed that the Betulaceae and Aceraceae had the widest seral amplitude, and the Salicaceae was a family typified as pioneer. There were no families specializing entirely with climax niche.

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Sex Differences in Cerebellar Structure of Healthy Adults (정상 성인에서 남녀의 소뇌 구조 차이)

  • Kim, Ji-Hyun H.;Bae, Su-Jin;Ryu, Keun-Taik;Kang, Min-Seong;Lim, Soo-Mee;Lee, Sun-Ho;Lee, So-Jin;Ko, Eun;Jeong, Do-Un
    • Korean Journal of Biological Psychiatry
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    • v.19 no.2
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    • pp.77-83
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    • 2012
  • Objectives : Although there have been studies that examine sex differences of the brain structures using magnetic resonance imaging, studies that specifically investigate cerebellar structural differences between men and women are scarce. The purpose of current study was to examine sex differences in structures of the cerebellum using cerebellar template and cerebellum analysis methods. Methods : Sixteen men and twenty women were included in the study. A MATLAB based program (MathWorks, Natick, MA, USA), Statistical Parametric Mapping 5 (SPM5) using the spatially unbiased infra-tentorial atlas template (SUIT) as the cerebellum template, was used to analyze the brain imaging data. Results : There was no significant difference in age between men (mean age=28.1) and women (mean age=27.2). Men showed higher gray matter density than women in two left cerebellar areas including the clusters in the lobules IV and V (a cluster located across the lobules IV and V), and the lobule VIIIb (lobules IV and V, t=4.75, p<0.001 ; lobule VIIIb, t=3.08, p=0.004). Conclusions : The current study found differences in cerebellar gray matter density between men and women. The current study holds its significance for applying the template specifically developed for the analysis of cerebellum.

Haplotype Diversity and Durability of Resistance Genes to Blast in Korean Japonica Rice Varieties

  • Cho, Young-Chan;Jeung, Ji-Ung;Park, Hun-June;Yang, Chang-In;Choi, Yong-Hwan;Choi, In-Bae;Won, Yong-Jae;Yang, Sae-June;Kim, Yeon-Gyu
    • Journal of Crop Science and Biotechnology
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    • v.11 no.3
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    • pp.205-214
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    • 2008
  • Blast disease caused by the fungal pathogen, Magnaporthe oryzae, is one of the most damaging diseases in rice. The use of resistant varieties is an effective measure to control the disease, however, many resistant varieties were broken down to their resistance effects by the differentiating of new virulent isolates. This study was done to analyze the haplotypes of 31 microsatellite markers linked to five major R genes and two QTLs and to identify the alleles for the putatively novel genes related to durable resistance to blast in 56 Korean japonica and four indica varieties. The 31 microsatellite markers produced 2 to 13 alleles(mean = 5.4) and had PICi values ranging from 0.065 to 0.860(mean=0.563) among the 60 rice accessions. Cluster analysis based on allele diversities of 31 microsatellite markers grouped into 60 haplotypes and ten major clusters in 0.810 genetic similarity. A subcluster IV-1 grouped of early flowering varieties harboring Piz and/or Pi9(t) on chromosome 6 and Pita/Pita-2 gene on chromosome 12. The other subcluster V-1 consisted of four stable resistance varieties Donghae, Seomjin, Palgong and Milyang20. The analysis of putative QTLs associated with seven blast resistance genes using ANOVA and linear regression showed high significance to blast resistance across regions and isolates in the markers of two genes Piz and/or Pi9(t) and Pita/Pita-2. These results illustrate the utility of microsatellite markers to identify rice varieties is likely carrying the same R genes and QTLs and rice lines with potentially novel resistant gene.

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Classification of adult male torso shapes using 3D body scan data (3D 스캔 데이터에 의한 성인 남성의 체간부 형태 유형화)

  • Hong, Eun-Hee
    • Journal of the Korea Fashion and Costume Design Association
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    • v.21 no.4
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    • pp.165-179
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    • 2019
  • This study used 3D body scan data to classify body shapes according to the torso shape of adult males aged 20-75 years. This data will be provided so that the apparel industry can make apparel products corresponding to body characteristics by age. The study used 1,796 adult males between the ages of 20 and 75 and the 3D body shape data of the '5th Research on National Standard Anthropometry'. For data analysis, the program SPSSWIN Ver. 17.0 was used to calculate the mean and frequency allowing for a factor analysis, cluster analysis, analysis of variance, and Duncan test. To classify body shape according to the torso shape of adult males, this study considered nine factors: 'horizontal size of torso,' 'vertical size of body,' 'curve of torso and waist-abdomen flatness ratio,' 'length of torso,' 'shape of neck area,' 'degree of lateral curve,' 'difference between front and back interscye length,' 'shoulder armscye shape,' and 'chest flatness ratio.' Based on the results of the factor analysis, the torso shapes of adult males were classified into five types. Type 1 is "upright body with flat, curvy shape", Type 2 is "curve sway back body type", Type 3 is "flat, abdominally obese body", Type 4 is "obese, crooked body" and Type 5 is "thick sway front body type." named.

Demand Analysis on Preschooler Consumer Education in Accordance With Characteristics of Preschooler Teacher (유아교사의 특성에 따른 유아소비자교육 요구분석)

  • Lee, Hee-Ja;Kim, Su-Jin
    • Korean Journal of Human Ecology
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    • v.9 no.2
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    • pp.189-203
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    • 2000
  • This study was proposed preschooler consumer education curriculum to give effect at a preschooler education institute and was investigated into relations with practical degree, needful degree and demandable degree according to preschooler teacher's characteristics. The survey of this research was conducted by means of questionnaire with 548 teachers of nursery and kindergarten in Seoul. Also it was carried out two stages cluster sampling, personal interview. the statistics used for data analysis was frequency, mean, percentile, t-test, one way ANOVA, Pearson's r, and regression using the SPSS/PC+ program. The results and findings of this study were summarized as follows. 1) Practical degree on total preschooler consumer education was looked into being low, also needful degree on total preschooler consumer education examined being very high. 2) Demandable degree on preschooler consumer education differed significantly according to preschooler education institute, preschooler's age in charge. 3) Practical degree on preschooler consumer education correlated positively to needful degree on preschooler consumer education. And practical degree on preschooler consumer education correlated negatively to demandable degree on preschooler consumer education. 4) Preschooler teacher's age and career had affected to money management in practical degree by regression analysis used to dummy variable related with characteristics of preschooler teacher.

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