• Title/Summary/Keyword: Internal transcribed spacer

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New Records of Fungi Growing on Jejudo (제주 국내 미기록 자생버섯)

  • Ko, Pyung Yeol;Lee, Hyang Burm;Lee, Seung Hak;Jeun, Yong Chull
    • The Korean Journal of Mycology
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    • v.43 no.3
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    • pp.142-148
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    • 2015
  • In this study, among the wild mushrooms collected on Jeju Island for the recently 9 years, 5 species are newly reported to Korea. They are identified as Ramariopsis subtilis, Coltriciella pusilla, Lactifluus ochrogalactus, Microstoma insititium and Morchella semilibera based on macromorphological and microscopic observation. In addition, Lactifluus ochrogalactus and Microstoma insititia were re-identified by analysis of internal transcribed spacer of ribosomal DNA.

Two Novel Species of Endophytic Fungi Isolated from Roots of Rhododendron schlippenbachii in Korea (철쭉의 뿌리에서 분리된 두 종의 국내 미기록 내생균)

  • Park, Hyeok;Eom, Ahn-Heum
    • The Korean Journal of Mycology
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    • v.45 no.3
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    • pp.229-233
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    • 2017
  • We isolated endophytic fungal strains from roots of Rhododendron schlippenbachii growing in Minjujisan mountain, Korea. The two strains were identified as Engyodontium album and Phaeosphaeria microscopica based on their morphological characteristics and sequence analysis of the internal transcribed spacer (ITS) and large subunit regions of the ribosomal DNA. These two species, E. album and P. microscopica, have not been previously reported in Korea.

Two New Records of Ascomycetes from Crop Field Soils in Korea

  • Adhikari, Mahesh;Kim, Hyun Seung;Gurung, Sun Kumar;Bazie, Setu;Lee, Hyun Gu;Lee, Hyang Burm;Lee, Youn Su
    • The Korean Journal of Mycology
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    • v.45 no.3
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    • pp.167-174
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    • 2017
  • In the ongoing survey of fungal diversity in Korea, two Ascomycetes species, namely Rhinocladiella similis and Toxicocladosporium irritans, were isolated in 2016. These species were identified based on the internal transcribed spacer region and morphological characteristics. This is the first report of these species in Korea, and the morphological characteristics and images of the fungi are presented.

Analysis of ITS Nucleotide Sequences in Ribosomal DNA of Morus Species (뽕나무속 식물의 ITS 영역 염기서열 분석)

  • 성규병;류근섭;김호락;남학우;구태원
    • Journal of Sericultural and Entomological Science
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    • v.43 no.1
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    • pp.1-8
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    • 2001
  • Nucleotide sequence in internal transcribed spacer (ITS) regions of ribosomal DNA among mulberry varieties (Morus species) were analyzed in order to identify the possibility of classification for the species. The variations in the ITS regions were compared among 9 mulberry varieties and one variety of Cudrania species as an outgroup. ITS 1 region of the varieties ranging from 219 to 220 bp in length was 49-50 bp shorter than ITS 2 region. Of 510 sites in the ITS 1 and 2 regions, 148 sites were potentially variable, of which 52% and 48% sites were distributed in ITS 1 and ITS 2 regions, respectively. By pairwise comparisons on the nucleotide sequences in the ITS 1 and 2 regions among 9 mulberry varieties, they were classified into 5 groups. Divergence values of the sequences, however, were considerably low ranging from 0 to 1.3%. Especially, there was no divergence among Backasipmunja, Chungilppong and Milsungpong and Jungyasang, Ssarigol II and Yulbon, respectively.

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Selection of Lecanicillium Strains with High Virulence against Developmental Stages of Bemisia tabaci

  • Park, Hee-Yong;Kim, Keun
    • Mycobiology
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    • v.38 no.3
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    • pp.210-214
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    • 2010
  • Selection of fungal strains with high virulence against the developmental stages of Bemisia tabaci was performed using internal transcribed spacer regions. The growth rate of hyphae was measured and bioassay of each developmental stage of B. tabaci was conducted for seven days. All of the fungal strains tested were identified as Lecanicillium spp., with strain 4078 showing the fastest mycelium growth rate (colony diameter, 16.3 $\pm$ 0.9 mm) among the strains. Compared to strain 4075, which showed the slowest growth rate, the growth rate of strain 4078 was increased almost 2-fold after seven days. Strains 4078 and Btab01 were most virulent against the egg and larva stages, respectively. The virulence of fungal strains against the adult stage was high, except for strains 41185 and 3387. Based on the growth rate of mycelium and level of virulence, strains 4078 and Btab01 were selected as the best fungal strains for application to B. tabaci, regardless of developmental stage.

Oligonucleotide Array-based Detection and Genotyping of Mollicutes (Acholeplasma, Mycoplasma, and Ureaplasma)

  • Jang, Hyun-Jung;Kim, Hyo-Myeung;Kang, Byeong-Chul;Kim, Cheol-Min;Park, Hee-Kyung
    • Journal of Microbiology and Biotechnology
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    • v.19 no.3
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    • pp.265-270
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    • 2009
  • An oligonucleotide array was developed to detect and genotype mollicutes based on the internal transcribed spacer (ITS) sequence. The results of the assay were compared with those of a PCR-RFLP assay. The proposed oligonucleotide array containing 5 genus- and 23 species-specific probes was able to detect Mycoplasma species, including M. penetrans and M. spermatophilum, that were not detected by the PCR-RFLP assay. Therefore, the results demonstrated that the proposed oligonucleotide array was effective for the detection and discrimination of 23 species, including an acholeplasma, 21 mycoplasmas, and a ureaplasma, and showed promise as a countermeasure to ensure that biological products are safe and of good quality.

Two New Species of Cryptococcus sp. and Candida sp. from Wild Flowers in Korea

  • Min, Jin-Hong;Kang, Min-Gu;Ryu, Jin-Ju;Lee, Hyang-Burm;Kim, Chang-Mu;Kim, Ha-Kun;Lee, Jong-Soo
    • Mycobiology
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    • v.40 no.4
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    • pp.255-257
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    • 2012
  • Among 80 types of yeast isolated from wild flowers in Daejeon, Korea, two species that have not yet been identified by phylogenetic analysis of the internal transcribed spacer-2 (ITS2) genes and 26S rDNA sequences were identified as Candida sp. 44-C-1 and Cryptococcus sp. 9-D-1. Neither of the newly identified species formed ascospores, while Candida sp. 44-C-1 formed pseudomycelium and Cryptococcus sp. 9-D-1 did not.

A New Record of Penicillium antarcticum from Marine Environments in Korea

  • Park, Myung Soo;Lee, Eun Ji;Fong, Jonathan J.;Sohn, Jae Hak;Lim, Young Woon
    • Mycobiology
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    • v.42 no.2
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    • pp.109-113
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    • 2014
  • During a survey of marine fungi from the waters surrounding Jeju Island, Korea, several Penicillium strains were isolated from seawater and marine sponges. Based on morphological characteristics and phylogenetic analyses of the internal transcribed spacer and RNA polymerase subunit II, four strains were identified as Penicillium antarcticum, a fungus that, to the best of our knowledge, had not been previously reported in Korea. Here, we provide detailed descriptions of the morphological characteristics and extracellular enzyme activities of the four strains.

Molecular and Morphological Characterization of a Taxol-Producing Endophytic Fungus, Gliocladium sp., from Taxus baccata

  • Sreekanth, D.;Sushim, G.K.;Syed, A.;Khan, B.M.;Ahmad, A.
    • Mycobiology
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    • v.39 no.3
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    • pp.151-157
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    • 2011
  • The endophytic fungal populations of different tissues of Taxus baccata grown at high altitudes in West Bengal, India were explored. These isolated fungal populations represented different genera, which were screened for taxol production using immunoassay technique. The culture AAT-TS-$4_1$ that produced taxol was identified as Gliocladium sp. based on its cultural, morphological characteristics, internal transcribed spacer, and 18S rRNA sequence analysis. Kinetics of taxol production as a function of culture growth were investigated.

Aphanoascus fulvescens: A New Record from Crop Field Soil in Korea

  • Gurung, Sun Kumar;Adhikari, Mahesh;Bazie, Setu;Kim, Hyun Seung;Lee, Hyun Gu;Lee, Hyang Burm;Lee, Youn Su
    • The Korean Journal of Mycology
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    • v.45 no.2
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    • pp.107-113
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    • 2017
  • Aphanoascus fulvescens KNU16-343 was isolated from crop field soil and identified based on morphological and molecular characteristics. The shape and size of conidia and conidiophores, as well as the internal transcribed spacer region of rDNA, confirmed that the isolate was A. fulvescens. This is the first report of this fungal species in Korea.