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Point Mutations in the Split PLC-γ1 PH Domain Modulate Phosphoinositide Binding

  • Kim, Sung-Kuk;Wee, Sung-Mo;Chang, Jong-Soo;Kwon, Taeg-Kyu;Min, Do-Sik;Lee, Young-Han;Suh, Pann-Ghill
    • BMB Reports
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    • v.37 no.6
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    • pp.720-725
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    • 2004
  • A number of signaling molecules contain small pleckstrin homology (PH) domains capable of binding phosphoinositides or proteins. Phospholipase C (PLC)-${\gamma}1$ has two putative PH domains, an $NH_2$-terminal (PH1) and a split PH domain ($nPH_2$ and $cPH_2$). We previously reported that the split PH domain of PLC-${\gamma}1$ binds to phosphatidylinositol 4-phosphate (PI(4)P) and phosphatidylinositol 4,5-bisphosphate (PI(4,5)$P_2$) (Chang et al., 2002). To identify the amino acid residues responsible for binding with PI(4)P and PI(4,5)$P_2$, we used site-directed mutagenesis to replace each amino acid in the variable loop-1 (VL-1) region of the PLC-${\gamma}1$ $nPH_2$ domain with alanine (a neutral amino acid). The phosphoinositide-binding affinity of these mutant molecules was analyzed by Dot-blot assay followed by ECL detection. We found that two PLC-${\gamma}1$ nPH2 domain mutants, P500A and H503A, showed reduced affinities for phosphoinositide binding. Furthermore, these mutant PLC-${\gamma}1$ molecules showed reduced PI(4,5)$P_2$ hydrolysis. Using green fluorescent protein (GFP) fusion protein system, we showed that both $PH_1$ and $nPH_2$ domains are responsible for membrane-targeted translocation of PLC-${\gamma}1$ upon serum stimulation. Together, our data reveal that the amino acid residues $Pro^{500}$ and $His^{503}$ are critical for binding of PLC-${\gamma}1$ to one of its substrates, PI(4,5)$P_2$ in the membrane.

Assessing the Impact of Climate Change on Water Resources: Waimea Plains, New Zealand Case Example

  • Zemansky, Gil;Hong, Yoon-Seeok Timothy;Rose, Jennifer;Song, Sung-Ho;Thomas, Joseph
    • Proceedings of the Korea Water Resources Association Conference
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    • 2011.05a
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    • pp.18-18
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    • 2011
  • Climate change is impacting and will increasingly impact both the quantity and quality of the world's water resources in a variety of ways. In some areas warming climate results in increased rainfall, surface runoff, and groundwater recharge while in others there may be declines in all of these. Water quality is described by a number of variables. Some are directly impacted by climate change. Temperature is an obvious example. Notably, increased atmospheric concentrations of $CO_2$ triggering climate change increase the $CO_2$ dissolving into water. This has manifold consequences including decreased pH and increased alkalinity, with resultant increases in dissolved concentrations of the minerals in geologic materials contacted by such water. Climate change is also expected to increase the number and intensity of extreme climate events, with related hydrologic changes. A simple framework has been developed in New Zealand for assessing and predicting climate change impacts on water resources. Assessment is largely based on trend analysis of historic data using the non-parametric Mann-Kendall method. Trend analysis requires long-term, regular monitoring data for both climate and hydrologic variables. Data quality is of primary importance and data gaps must be avoided. Quantitative prediction of climate change impacts on the quantity of water resources can be accomplished by computer modelling. This requires the serial coupling of various models. For example, regional downscaling of results from a world-wide general circulation model (GCM) can be used to forecast temperatures and precipitation for various emissions scenarios in specific catchments. Mechanistic or artificial intelligence modelling can then be used with these inputs to simulate climate change impacts over time, such as changes in streamflow, groundwater-surface water interactions, and changes in groundwater levels. The Waimea Plains catchment in New Zealand was selected for a test application of these assessment and prediction methods. This catchment is predicted to undergo relatively minor impacts due to climate change. All available climate and hydrologic databases were obtained and analyzed. These included climate (temperature, precipitation, solar radiation and sunshine hours, evapotranspiration, humidity, and cloud cover) and hydrologic (streamflow and quality and groundwater levels and quality) records. Results varied but there were indications of atmospheric temperature increasing, rainfall decreasing, streamflow decreasing, and groundwater level decreasing trends. Artificial intelligence modelling was applied to predict water usage, rainfall recharge of groundwater, and upstream flow for two regionally downscaled climate change scenarios (A1B and A2). The AI methods used were multi-layer perceptron (MLP) with extended Kalman filtering (EKF), genetic programming (GP), and a dynamic neuro-fuzzy local modelling system (DNFLMS), respectively. These were then used as inputs to a mechanistic groundwater flow-surface water interaction model (MODFLOW). A DNFLMS was also used to simulate downstream flow and groundwater levels for comparison with MODFLOW outputs. MODFLOW and DNFLMS outputs were consistent. They indicated declines in streamflow on the order of 21 to 23% for MODFLOW and DNFLMS (A1B scenario), respectively, and 27% in both cases for the A2 scenario under severe drought conditions by 2058-2059, with little if any change in groundwater levels.

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Virtual Tactical Map : Military Briefing Tools for Virtual Training based on Augmented Reality (가상 전술 지도 : 증강현실에 기반한 군사 훈련 브리핑 도구)

  • Jung Kyung-Boo;Lee Sang-Won;Choi Byung-Uk;Jeong Seung-Do
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.31 no.4C
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    • pp.341-350
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    • 2006
  • The sand table training is one of the most effective training method in military operations which can accomplish missions such as simulation and rehearsal without limitations related to time, space, money and so on. Previous sand table training has many problems like that the sand table cannot represent real field condition because of its physical properties. So, it is hard to be preserved and impossible to include much of information into them. In this paper, we make an approach based on Augmented Reality(AR) to solve these problems and propose an efficient military training briefing tool with virtual sand table environment described as actual battle field Virtual Tactical Map(VTM) can realize a virtual military training with simple action like moving marker or tangible interface by hand. Real-time state information of VTM gives us more organic intelligence for entire situation. Tangible AR interface provides users with a contents authoring tool that is natural, intuitive and easy to deal with as interaction between user in real world and system that augmented real world with virtual object. VTM is a newly designed military training briefing tools. A military training content can be reproduced and it is possible that user uses this content later. Thus, it shows us potential possibilities of AR applications on military leaning field.

Periodic characteristics of long period tidal current by variation of the tide deformation around the Yeomha Waterway (염하수로 인근에서 조석 변형과 장주기 조류성분의 변동 특성)

  • Song, Yong-Sik;Woo, Seung-Buhm
    • Journal of Korean Society of Coastal and Ocean Engineers
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    • v.23 no.5
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    • pp.393-400
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    • 2011
  • The mass transport is very complicated at the area which has the macro tide and complex geometry such as Gyeonggi bay. Especially, the long period current has a strong influence on the estuarine ecosystem and the long-term distribution of substances. The long period current is caused by several external forcing, whose unique characteristic varies spatially and temporally. The variation characteristics of long period current is analysed and its generation mechanism is studied. The tidal nonlinear constituents such as overtide and compound tide are generated due to nonlinear interaction and it causes mean sea level setup. The tidal wave propagating up into estuary is transformed rapidly by decrease of cross-sectional area and depth. Therefore the mean sea level is getting rise toward upriver. The high and low tide level is similar between down-river(Incheon) and up-river(Ganghwa) during neap tide when the tidal deformation is decreased. The tidal phase difference between two tidal stations causes a periodic fluctuation of sea level difference. The low water level of Ganghwa station during spring tide does not descend under EL(-)2.5 m, but the low water level of Incheon fall down under EL(-)4.0 m. The variation of tidal range and its sea level are increased during spring tide. It is found that the long period current $M_{sf}$ is quite similar to that of sea level difference between the two tidal stations. It means that the sea surface inclination caused by the spatial difference of tidal deformation is important forcing for the generation of long period current.

Neuroendocrine Control of Gonadotropin Secretion during the Menstrual Cycle

  • Ryu, Kyung-Za
    • The Korean Journal of Pharmacology
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    • v.23 no.2
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    • pp.57-75
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    • 1987
  • Two modalities of gonadotropin secretion, pulsatile gonadotropin and preovulatory gonadotropin surge, have been identified in the mammals. Pulsatile gonadotropin secretion is modulated by the pulsatile pattern of GnRH release and complex ovarian steroid feedback actions. The neural mechansim that regulates the pulsatile release of GnRH in the hypothalamus is called "GnRH pulse generator". Ovarian steroids, estradiol and progesterone, appear to exert thier feedback effects both directly on the pituitary to modulate gonadotropin release and on a hypothalamic site to modulate GnRH release; estradiol primarily affects the amplitude while progesterone decreases the frequency of the pulsatile GnRH. Steroid hormones are known to affect catecholamine transmission in brain. MBH-POA is richly innervated by NE systems and close apposition of NE terminals and GnRH cell bodies occurs in the MBH as well as in the POA. NE normally facilitates pulsatile LH release by acting through ${\alpha}-receptor$ mechanism. However, precise nature of facilitative role of NE transmission in maintaining pulsatile LH has not been clearly understood. Close apposition of DA and GnRH terminals in ME might permit DA to influence GnRH release. Action of DA transmission probably is mediated by axo-axonic contacts between GnRH and DA fibers in the ME. Dopamine transmission does not normally regulate pulsatile LH release, but under certain conditions, increased DA transmission inhibit LH pulse. Endogenous opioid acts to suppress the secretion of GnRH into hypophysial portal circulation, thereby inhibiting gonadotropin secretion. However, an interaction between endogenenous opioid peptides and gonadotropin release is a complex one which involves ovarian hormones as well. LH secretion appears to be most suppressed by endogenenous opioids during the luteal phase, at a time of elevated progesterone secretion. The arcuate nucleus contains not only cell bodies for GnRH and ${\beta}-endorphin$ but also a dense aborization of fibers suggesting that GnRH release is changed by the interactions between GnRH and ${\beta}-endorphin$ cell bodies within the arcuate nucleus. The frequency and amplitude of pulsatile LH release seem to be increased during the preovulatory gonadotropin surge. Estradiol exerts positive feedback action on the hypothalamo-pituitary axis to trigger preovulatory LH surge. GnRH is also crucial hormonal stimulus for preovulatory LH surge. It is unlikely, however, that increased secretion of GnRH during the preovulatory gonadotropin surge represents an obligatory neural signal for generation of the LH discharge in primates including human. Modulation of preovulatory LH surge by catecholamines has been studied almost exclusively in rats. NE and E may be involved in distinct way to accumulate GnRH in the MBH and its release into the hypophysial portal system during the critical period for LH surge on proestrus in rats. However, the mechanisms whereby augmented adrenergic transmission may facilitate the formation and accumulation of GnRH in the ME-ARC nerve terminals before the LH surge have not been clearly understood.

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Regional Differences of Leaf Spot Disease on Grapevine cv. 'Campbell Early' Caused by Pseudocercospora vitis in Plastic Green House (포도 캠벨얼리의 무가온 하우스재배시 지역별 갈색무늬병 발생차이)

  • Jung, Sung-Min;Park, Jong-Han;Park, Seo-Jun;Lee, Han-Chan;Lee, Jae-Wook;Ryu, Myung-Sang
    • Research in Plant Disease
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    • v.15 no.3
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    • pp.193-197
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    • 2009
  • Pseudocercospora leaf spot was major disease of grape cultivar 'Campbell Early' in Korea. Leaf spot first appeared in early June and rapidly dispersed to other leaves through rainy season. Disease progress of leaf spot by Pseudocercospora vitis in plastic green house, in the two provinces (Gimje and Gimcheon), were investigated in 2007. Differences of Infected leaves (%) between cultivation systems were observed in field and plastic green house, but there was no difference between provinces. Micro environmental factors, such as temperature and relative humidity, were correlated with infected leaves by PROC REG procedure of SAS (Statistical Analysis System). As a result, regression model best described ($R^2=0.95^{**}$) the infected leaves as a function of the interaction of cumulated temperatures; Y (Infected leaves)=-7.0101+0.0496$\times$20Hcum (Cumulated hour above 20 degree)+0.0208$\times$20cum (Cumulated temperature above 20 degree)-0.2781$\times$25Hcum (Cumulated hour above 25 degree). A statistics model was shown that cumulated hour and temperature above specific degree were critical factor for Pseudocercospora leaf spot on the grapevine leaves in plastic green house.

A Study on the Estimation of Environmental Carrying Capacity and Sustainability in National Land using the Emergy Synthesis (에머지(Emergy) 개념을 이용한 국토환경용량 산정 및 지속성 평가에 관한 연구)

  • Kim, Nam-Kook;Chang, Yoon-Young
    • Journal of Environmental Impact Assessment
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    • v.25 no.2
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    • pp.141-154
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    • 2016
  • This study was conducted laying the focus on finding the mutual action between the substantial ecological value and economic system in the national land, and calculating the environmental carrying capacity and sustainability of the national land using the emergy synthesis. Particularly, this study pays attention watchfully to the reality that the analytic framework to analyze sustainability is not arranged well, as the concept of sustainable development considering environmental carrying capacity, which becomes a widely discussed topic today, is defined differently according to the subjective views of respective researchers, and the situation which needs in-depth evaluation on the interaction between nature and economy which becomes the fundamental of sustainable development. This study also aims at groping for correct direction for the national land development by calculating the environmental carrying capacity and index value which is appropriate to the national land and providing the framework for preparing the policy to induce the sustainable use and management of the national land. The concept of emergy synthesis which is used for the evaluation of environmental carrying capacity and sustainability in the national land, as in this case, can notify the information on current situation of the national land as well as explain how the national land transforms according to time pass (the role of information synthesis), and gives knowledge if the national land policies advances toward the direction of sustainable development (the role of policy evaluation and observation). Emergy synthesis also can take role for selecting best policy on the process of decision making on the exploitation of the national land (the role on the process of decision making).

Change of Statical Behavior and Ultimate Capacity of Steel Cable-stayed Bridges after Cable Failure (케이블 단선 후 강사장교의 구조 및 극한 거동 변화)

  • Kim, Seung-Jun;Choi, Jun-Ho;Won, Deok-Hee;Han, Taek-Hee;Kang, Young-Jong
    • Journal of Korean Society of Steel Construction
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    • v.23 no.6
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    • pp.747-761
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    • 2011
  • This paper presents an investigation on the change in the statical behavior and the ultimate capacity of steel cable-stayed bridges after cable failure. Cable failure can occur due to fire, direct vehicle clash accidents, cable or anchorage fatigue, and so on. Moreover, the cable may be temporarily disconnected during cable replacement work. When cable failure occurs, the load, that was supported by the broken cable is first transferred to another cable. Then the structural state changes due to the interaction between the girder, mast, and cables. Moreover, it can be predicted that the ultimate capacity will decrease after cable failure, because of the loss of the support system. In this study, the analysis method is suggested to find the new equilibrium state after cable failure based on the theory of nonlinear finite element analysis. Moreover, the ultimate analysis method is also suggested to analyze the ultimate behavior of live loads after cable failure. For a more rational analysis, a three-step analysis procedure is suggested and used, which consisted of initial shape analysis, cable failure analysis, and live load analysis. Using this analysis method, an analytical study was performed to investigate the changes in the structural state and ultimate behavior of steel cable-stayed bridges.

Characterization of small ubiquitin-like modifier E3 ligase, OsSIZ1, mutant in rice (벼의 small ubiquitin-like modifier E3 ligase, OsSIZ1 돌연변이체의 특성 분석)

  • Park, Hyeong Cheol;Koo, Sung Cheol;Kim, Hun;Choi, Wonkyun;Yun, Dae-Jin
    • Journal of Plant Biotechnology
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    • v.39 no.4
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    • pp.235-241
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    • 2012
  • Sumoylation is a reversible conjugation process that attaches the small ubiquitin modifier (SUMO) peptide to target proteins and regulates a wide variety of cellular functions in eucaryotes. As final step of the sumoylation, SUMO E3 ligases facilitate conjugation of SUMO to target proteins. To characterize the functions of the SUMO E3 ligases in Oryza sativa, we isolated a single recessive rice SUMO E3 ligase, Ossiz1-2 mutant. In addition, we also confirmed the interaction between OsSIZ1/-2 and OsSUMO1, respectively, by using an Agrobacterium-based tobacco luciferase transient expression system. Ossiz1-2 mutant exhibited approximately 20% reduction in growth and developmental units compared with wild type. Especially, number of filled seeds and total seed weight were dramatically decreased in the Ossiz1-2 mutant rice. Thus, these results suggest that sumoylation by the OsSIZ1 as SUMO E3 ligase plays an important role in regulating growth and development in rice.

Improvement of Herbicide Use in Crop Production VII. Weeding Effects in Systemic Use of Some Herbicides on Soybean(Glycine max L.) Cropped after Barley (제초제(除草劑)의 사용법(使用법法) 개발(開發)을 위한 연구(硏究) - 제7보(弟7報) 맥후작(麥後作) 대두(大豆)(Glycine max L.) 잡초방제(雜草防除)를 위한 수종제초제(數種除草劑)의 체계처리(體系處理)에 관한 연구(硏究))

  • Guh, J.O.;Lee, K.S.;Kim, D.K.
    • Korean Journal of Weed Science
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    • v.4 no.2
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    • pp.194-203
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    • 1984
  • To evaluate the compatibility in systemic use of 4 kinds of herbicides on both weeds and soybeans, trials were conducted at Coll. Exp. Farm/Jonnam Nat'l. Univ., 1983. Among the experimented 4 herbicides, alachlor or metribuzin were applied at pre-emergence, and followed by postemergence spraying of acifluorfen or bentazon, respectively. All herbicides were applicated at rates of 0, 0.25, 0.5, and 0.75 kg active ingredients per ha. Under the conditions which Echinochloa crusgalli and Digitaria adscendense were dominating, most comprehensive compatibility was found from each rates 0.5 - 0.75 kg/ha at 60 days after crop seeding date. However, slight transient leaf burn was evident at the plots of metribuzin and/or acifluorfen applicated. The positive tendency of herbicide interactions in weeding efficacy was observed from the system in alachlor sequence. However, the results in crop growth and yields at hervest indicate the necessity of higher rates of each herbicides upto 0.75 kg/ha for the consistence weeding efficacies. And more excellent weeding results (crop growth and yields) on crop plants were provided from the plots which applicated by residual type herbicide, namely acifluorfen than bentzaon.

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