• Title/Summary/Keyword: Initial population

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Genetic Linkage Mapping of RAPD Markers Segregating in Korean Ogol Chicken - White Leghorn Backcross Population

  • Hwang, K.C.;Song, K.D.;Kim, T.H.;Jeong, D.K.;Sohn, S.H.;Lillehoj, H.S.;Han, J.Y.
    • Asian-Australasian Journal of Animal Sciences
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    • v.14 no.3
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    • pp.302-306
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    • 2001
  • This study was carried out to construct mapping population and to evaluate the methods involved, including polymorphic DNA marker system and appropriate statistical analysis. As an initial step to establish chicken genome mapping project, White Leghorn (WL) and Korean Ogol chicken (KOC) were used for generating backcross population. From 8 initial parents, total 280 backcross progenies were obtained and 40 were used for genotyping and linkage analysis. For development of novel polymorphic markers for KOC, Random Amplified Polymorphic DNA (RAPD) markers specific for this chicken line were generated. Also included in this study were six microsatellite markers from East Lansing map as reference loci. For segregation analysis, 15 RAPD markers and 6 microsatellites were used to genotype the backcross population. Among the RAPD markers that we developed, 2 pairs of markers were identified to be linked and another 4 RAPD markers showed linkage with microsatellites of known map. In summary, this study showed that our backcross population generated from the mating of KOC to WL serves as a valuable genetic resource for genotyping. Furthermore, RAPD markers are proved to be valuable in linkage mapping analysis.

Design Flow Velocity Changes According to the Design Flow Determination Methods in the Sanitary Sewer (오수관 설계유량 산정법이 설계유속에 미치는 영향)

  • Hyun, In-hwan;Won, Seung-hyun;Kim, Hyung-jun;Lee, Che-in
    • Journal of Korean Society of Water and Wastewater
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    • v.19 no.6
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    • pp.749-757
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    • 2005
  • The present study analyzed actual cases of designed flow estimation method and designed flow rate of sewage pipe lines. In order to examine the effects of peak-hour demand factor estimation with given daily highest peak loading, we analyzed its effects on designed flow rate with changing the peak-hour demand factor from 2.0 to 10.0. The results of this study are as follows. When reviewing the recent designs, we found that 59.4% of pipe line with 250mm and 300mm diameter, which fall under minimum allowable pipeline did not meet the minimum velocity which is specified as 0.6m/sec in design standards. The pipe line that have minimal access population or have very low slope did not satisfy the minimum velocity. In estimating the designed sewage flow, the applied daily highest peak loading and hourly highest peaking loading were the load factor for the entire population of the planned area, and for the peak loading of the initial pipes connected to a very small population, we applied the same factor as that applied to the entire area and, as a result, the hourly highest flow was underestimated. Because, in case of the initial pipes, the method of applying the same peak loading to all subject areas is highly possible to produce underestimated design flow, when estimating the designed flow of the initial pipes connected to a small population need to adopt a rational flow factor according to the size of population. For this, it is considered to investigate and analyze raw data on daily and hourly variation of sewage flow.

Development of a Model to Predict the Primary Infection Date of Bacterial Spot (Xanthomonas campestris pv. vesicatoria) on Hot Pepper

  • Kim, Ji-Hoon;Kang, Wee-Soo;Yun, Sung-Chul
    • The Plant Pathology Journal
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    • v.30 no.2
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    • pp.125-135
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    • 2014
  • A population model of bacterial spot caused by Xanthomonas campestris pv. vesicatoria on hot pepper was developed to predict the primary disease infection date. The model estimated the pathogen population on the surface and within the leaf of the host based on the wetness period and temperature. For successful infection, at least 5,000 cells/ml of the bacterial population were required. Also, wind and rain were necessary according to regression analyses of the monitored data. Bacterial spot on the model is initiated when the pathogen population exceeds $10^{15}cells/g$ within the leaf. The developed model was validated using 94 assessed samples from 2000 to 2007 obtained from monitored fields. Based on the validation study, the predicted initial infection dates varied based on the year rather than the location. Differences in initial infection dates between the model predictions and the monitored data in the field were minimal. For example, predicted infection dates for 7 locations were within the same month as the actual infection dates, 11 locations were within 1 month of the actual infection, and only 3 locations were more than 2 months apart from the actual infection. The predicted infection dates were mapped from 2009 to 2012; 2011 was the most severe year. Although the model was not sensitive enough to predict disease severity of less than 0.1% in the field, our model predicted bacterial spot severity of 1% or more. Therefore, this model can be applied in the field to determine when bacterial spot control is required.

Long-term population monitoring with population viability analysis of river otter in Korea (홍천강 유역에 서식하는 멸종위기종 수달의 개체군변이분석을 통한 생태모니터링 연구)

  • Lee, Sang-Don
    • Journal of Environmental Impact Assessment
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    • v.22 no.5
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    • pp.525-528
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    • 2013
  • River otter(Lutra lutra) are listed as endangered species and Natural monument in Korea, and this study examined the possibility of extinct of river otter in Hongchon river using with the application of Population Viability Analysis (PVA) technique. In Hongchon river areas population was estimated 9 individuals for the last 1999-2005 years and PVA analysis was done for the next 10 years using the average population of 9. Using the initial population the river otter was estimated 30% of extinct for the next 10 years. This estimation was quite low considering water pollution and construction of highways. Also PVA only used population size lacking in other life history information. Nonetheless river otter population can be in risk of extinction if the current construction of crossovers, cement bank are maintained. Long term information regarding life history needs essential.

Differential Structural Responses of Ginseng Root Tissues to Different Initial Inoculum Levels of Paenibacillus polymyxa GBR-1

  • Jeon, Yong-Ho;Kim, Young-Ho
    • The Plant Pathology Journal
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    • v.24 no.3
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    • pp.352-356
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    • 2008
  • Root discs of 4-year-old ginseng, Panax ginseng C. A. Meyer, were inoculated with the higher($10^8$ colonyforming units(CFU)/ml) and lower($10^6\;or\;10^5$ CFU/ml) initial inoculum levels of a plant-growth promoting rhizobacterium(PGPR), Paenibacillus polymyxa GBR-1 to examine rot symptom development and bacterial population changes on the root discs. At the higher inoculum level, brown rot symptoms developed and expanded on the whole root discs in which the bacterial population increased continuously up to 4 days after inoculation. In light and electron microscopy, ginseng root cells on the inoculation sites were extensively decayed, which were characterized by dissolved cell walls and destructed cytoplasmic contents. However, no rot symptoms were developed and the bacterial population increased only during the initial two days of inoculation at the lower inoculum level($10^6$ CFU/ml) of P. polymyxa GBR-1. At the lower inoculum level($10^5$ CFU/ml), boundary layers with parallel periclinal cell divisions, structurally similar to wound periderm, were formed internal to the inoculation sites, beneath which the cells were intact containing numerous normal-looking starch granules and no disorganized cell organelles, suggesting that these structural features may be related to the suppression of symptom development, a histological defense mechanism.

Functional response and suppression of prey population if Amblyseius womersleyi Schicha(Acarina:Phytoseiidae) to Tetranychus Kanzawai Kishi-da(Acarina: Tetranychidae) (긴털이리응애(Amblyseius Womersleyi Schicha)의 간자와응애에대한 기능반응 및 개체군 억제에 관한 연구)

  • 김도익;이승찬
    • Korean journal of applied entomology
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    • v.35 no.2
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    • pp.126-131
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    • 1996
  • These experiments were conducted in the laboratory conditions to determine the prey consumption of a predaciousphytoseiid mite, Amblyseius womersleyi Schicha, and its ability to regulate the population of tea redspider mite, Tetranychus kanzawai Kishida. The functional response curve of the adult A. womersleyi to thedensity of eggs, larvae, and nymphs of T. kanzawai indicated Holling's Type 11: the consumption of prey bythe adult A. womersleyi increased with the prey density but the consumption rate decreased. The critical initialratio to suppress the prey population by the predator seemed to be 32:l @rey:predator) at 25"C, and 16:l at20$^{\circ}$C on kidney bean plant. The predator could not regulate any initial ratio of the prey population at 15$^{\circ}$C.^{\circ}$C.

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STOCK ASSESSMENT OF YELLOW CROAKER IN THE YELLOW SEA AND EAST CHINA SEA (황해및 동지나해의 참조기자원량 해석 -주로 한국기선저인망, 안강망, 유자망, 일본기선저인망 어장을 중심으로-)

  • SHIN Sang Taek
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.8 no.1
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    • pp.11-19
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    • 1975
  • Yellow croaker, Pseudosciaena manchurica Jordan et Thompson, in the Yellow Sea and the East China Sea are subjected to be caught by trawl nets, stow nets and gill nets throughout the year. Monthly indices of population size are calculated. Mathematic models (I) were used in order to determine catchability coefficient, natural mortality, fishing mortality, coefficient coefficient of the fishing ground and dispersion coefficient from the fishing ground. The results are summarized as follows: 1971 1972 1973 $$Catchability\;coefficient\;(C)=1.9369\times10^{-5}\;7.5459\times10^{-6}\;1.2670\times10^{-5}$$ Natural mortality (M) = 0.1645 0.6152 0.4367 Population for the first half season (February 1 to May 31) 1971 1972 1973 Initial\;population=\;107,100M/T 209,100M/T 214,400M/T Dispersion=83,000' 159,700' 133,400' Natural mortailty= 4,700' 32.700' 19,100' Final population= 2,800' 4,500' 49,000' Population for the latter half season (June 1st to the following January 31st) 1971 1972 1973 Initial population= 44,500M/T 67,500M/T 83,800MT Recruitment= 19,000' 183,900' 67,100' Natural mortality= 5,900' 67,900' 38,500' Final population= 37,000' 168,300' 92,400'.

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LOCAL APPROXIMATE SOLUTIONS OF A CLASS OF NONLINEAR DIFFUSION POPULATION MODELS

  • Yang, Guangchong;Chen, Xia;Xiao, Lan
    • Nonlinear Functional Analysis and Applications
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    • v.26 no.1
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    • pp.83-92
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    • 2021
  • This paper studies approximate solutions for a class of nonlinear diffusion population models. Our methods are to use the fundamental solution of heat equations to construct integral forms of the models and the well-known Banach compression map theorem to prove the existence of positive solutions of integral equations. Non-steady-state local approximate solutions for suitable harvest functions are obtained by utilizing the approximation theorem of multivariate continuous functions.

Comparison of Breeding System Between Single Population and Two Sub-population Scheme by Computer Simulation I. Equal genetic level for Sub-populations

  • Oikawa, T.;Matsura, Y.;Sato, K.
    • Asian-Australasian Journal of Animal Sciences
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    • v.10 no.4
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    • pp.422-427
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    • 1997
  • Breeding efficiency was investigated to reveal crucial factors for constructing effective breeding system with subdivided populations under equal genetic level. Simulation study of selection experiment was performed for 20 generations with 20 replications each, comparing average breeding values and inbreeding coefficients between the two breeding systems; single population scheme and two population scheme, each of which had the same genetic parameters. Genetic correlations (-0.5 to 0.5) were assumed to be caused only by pleiotropic effect of a gene. Phenotypes of the two traits generated by polygenic effect with additive 36 loci and residuals distributed normally were selected by two traits selection index procedure. Comparing between the single population scheme and the two population scheme, the single population scheme showed higher genetic gain with lower inbreeding coefficient. This result was confirmed particularly for the situation of high selection intensity, high heritability and high degree of unevenness for economic weight. Genetic correlations in the single population scheme were significantly lower than the two population scheme when initial genetic correlation was negative. When terminal crossbreeding for the two population scheme is taken into account, superiority of the two population scheme was suggested. The terminal crossbreeding was effective under the situation of long term selection, existence of moderate inbreeding depression and use of less extreme economic weight.

The role of massive Population III binary systems in the formation of gravitational wave radiation source and in the cosmic reionization

  • Lee, Hunchul;Yoon, Sung-Chul
    • The Bulletin of The Korean Astronomical Society
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    • v.42 no.2
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    • pp.64.2-64.2
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    • 2017
  • The Population III (Pop III) stars are thought to be massive. If massive Pop III stars form binary system and they experience mass transfer via the Roche lobe overflow, this may significantly change the properties of the system. For example, mass transfer in such system may shorten the period of the system, forming short period binary black hole (BBH) system, which is the most promising candidate for recently detected gravitational wave radiation sources. Also, there is an expectation that due to the stripped envelope of donor star by mass transfer, this system can play a significant role in the cosmic reionization by emitting more UV photons. However, this outcome highly depends on the initial properties of the system. We perform grid calculation on Pop III binary models with various initial primary masses (20 ~ 100 solar mass), initial separations, and initial mass ratios (q = 0.5 ~ 0.9). We find that 1) in most cases binary models show no increase in the number of ionizing photons and 2) formation of short period BBH system via mass transfer is highly unlikely.

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