• Research in Plant Disease
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• v.9 no.2
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• pp.89-93
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• 2003

An isolate of Tobacco mosaic virus (TMV) was isolated from potato cultivar ‘Chubak’ showing vein clearing and mild mosaic at Namhae in Korea. This isolate, TMV-St, was differentiated from other tobamoviruses based on biological properties, serological relationships and nucleotide sequence analyses of coat protein genes. TMV-St caused typical symptoms on four indicator plants as compared to the tobamovirus of TMV-U1, Pepper mild mottle virus (PMMoV), and Tomato mosaic virus (ToMV), which caused economic losses in Solanaceous vegetables, tomato, pepper, and eggplant. Remarkably, the TMV-St induced distinctly different symptom of systemic chlorotic spots on Chenophodium murale. On C. murale, Gomphorena globosa, and Nic-otiana rustica, the four viruses were classed by the virulence of systemic or local infections. In serological test TMV-St antiserum showed a precipitation line with each other tabamovirus. The CP gene of TMV-St contain 477 nucleotides, and the nucleotides sequence was the most similar to that of TMV-U1.

• Korean Journal of Environmental Biology
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• v.29 no.4
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• pp.280-285
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• 2011

As the plants grow in a fixed place, they can be a good indicator which reflects the level of environmental pollution. It is necessary for them to develop a strategy to cope with stress under unfavorable environmental conditions. In this study, spindle trees ($Euonymus$ $japonica$) were collected from a clean area (Kijang) as well as a heavily polluted area (Onsan) to check applicability of irradiation combined with plant bioassay to environmental monitoring. The leaves were irradiated with 0, 50 and 100 Gy of gamma rays, and then evaluated for antioxidative capacity with 1,1-diphenyl-2-picrylhydrazyl (DPPH) assay and superoxide dismutase (SOD) analysis. The result shows that there was no significant changes in SOD and EDA (Electron Donationg Ability) in the samples collected from a polluted area. In the meanwhile, SOD increased in the samples from a clean area until 6 to 10 hours after irradiation, then it decreased gradually until 24 hours after irradiation. In conclusion, the plants in the polluted area have developed higher resistance to oxidative stress induced by ionizing radiation than those in the relatively clean area. Irradiation combined with plant bioassay on enzymatic activities and free radical scavenging capacity has proven to be a possible tool for biomonitoring the environmental pollution.

• Proceedings of the Korean Society of Near Infrared Spectroscopy Conference
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• 2001.06a
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• pp.1061-1061
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• 2001

The scope of precision agriculture is to reach the put up cultivation goals by adjusting inputs as precise as possible after what is required by the soil and crop potentials, on a high spatial resolution. Consequently, precision agriculture is also often called site specific agriculture. Regulation of field inputs “on the run” has been made possible by the GPS (Geographical Position System)-technology, which gives the farmer his exact real time positioning in the field. The general goal with precision agriculture is to apply inputs where they best fill their purpose. Thus, resources could be saved, and nutrient losses as well as the impact on the environment could be minimized without lowering total yields or putting product quality at risk. As already indicated the technology exists to regulate the input based on beforehand decisions. However, the real challenge is to provide a reliable basis for decision-making. To support high spatial resolution, extensive sampling and analysis is required for many soil and plant characteristics. The potential of the NIR-technology to provide rapid, low cost analyses with a minimum of sample preparation for a multitude of characteristics therefore constitutes a far to irresistible opportunity to be un-scrutinized. In our work we have concentrated on soil-analysis. The instrument we have used is a Bran Lubbe InfraAlyzer 500 (1300-2500 nm). Clay- and organic matter-contents are soil constituents with major implications for most properties and processes in the soil system. For these constituents we had a 3000-sample material provided. High performance models for the agricultural areas in Sweden have been constructed for clay-content, but a rather large reference material is required, probably due to the large variability of Swedish soils. By subdividing Sweden into six areas the total performance was improved. Unfortunately organic matter was not as easy to get at. Reliable models for larger areas could not be constructed. However, through keeping the mineral fraction of the soil at minimal variation good performance could be achieved locally. The influence of a highly variable mineral fraction is probably one of the reasons for the contradictory results found in the literature regarding organic matter content. Tentative studies have also been performed to elucidate the potential performance in contexts with direct operational implications: lime requirement and prediction of plant uptake of soil nitrogen. In both cases there is no definite reference method, but there are numerous indirect, or indicator, methods suggested. In our study, field experiments where used as references and NIR was compared with methods normally used in Sweden. The NIR-models performed equally or slightly better as the standard methods in both situations. However, whether this is good enough is open for evaluation.

• Journal of Microbiology and Biotechnology
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• v.15 no.6
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• pp.1286-1298
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• 2005

The genus Paenibacillus is a new group of bacilli separated from the genus Bacillus, and most of species have been isolated from soil. In the present study, we collected 450 spore-forming bacilli from the roots of winter crops, such as barley, wheat, onion, green onion, and Chinese cabbage, which were cultivated in the southern part of Korea. Among these 450 isolates, 104 Paenibacillus-like isolates were selected, based on their colony shape, odor, color, and endospore morphology, and 41 isolates were then finally identified as Paenibacillus spp. by 16S rDNA sequencing. Among the 41 Paenibacillus isolates, 23 were classified as P. polymyxa, a type species of the genus Paenibacillus, based on comparison of the 16S rDNA sequences with those of 32 type strains of the genus Paenibacillus from the GenBank database. Thirty-five isolates among the 41 Paenibacillus isolates exhibited antagonistic activity towards plant fungal and bacterial pathogens, whereas 24 isolates had a significant growth-enhancing effect on cucumber seedlings, when applied to the seeds. An assessment of the root-colonization capacity under gnotobiotic conditions revealed that all 41 isolates were able to colonize cucumber roots without any significant difference. Twenty-one of the Paenibacillus isolates were shown to contain the nifH gene, which is an indicator of $N_{2}$ fixation. However, the other 20 isolates, including the reference strain E681, did not incorporate the nifH gene. To investigate the diversity of the isolates, a BOX-PCR was performed, and the resulting electrophoresis patterns allowed the 41 Paenibacillus isolates to be divided into three groups (Groups A, B, and C). One group included Paenibacillus strains isolated mainly from barley or wheat, whereas the other two groups contained strains isolated from diverse plant samples. Accordingly, the present results showed that the Paenibacillus isolates collected from the rhizosphere of winter crops were diverse in their biological and genetic characteristics, and they are good candidates for further application studies.

• Korean Journal of Environment and Ecology
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• v.34 no.4
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• pp.304-317
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• 2020

This study conducted selected two sites in Geumnamhonam and four sites in Honam-Jeongmaek for vegetation survey with consideration to the location environment and anthropogenic impacts to investigate the vegetation structures of the Geumnamhonam-Jeongmaek·Honam-Jeongmaek ridge areas. Using TWINSPAN (two-way indicator species analysis), each of the two ridge areas were categorized into seven plant communities. The differential species in the TWINSPAN technique indirectly represent the environmental factors of plant communities, and the community types of the two ridge areas were divided based on environmental factors such as altitudes above sea level, soil moisture, and disturbance. These results were in harmony with the environmental factors of the DCA (detrended correspondence analysis) axis 1. In the low-lying areas of both ridge areas, afforestation tree species such as Pinus rigida and P. thunbergii were in competition with native tree species. As such, in the low-lying areas, artificial vegetation disturbance was severe due to afforestation and development projects. In relatively highland areas, such as upper slopes, and top areas, in the ridge, the vegetation type with the dominance of Quercus mongolica, Q. variabilis, and P. densiflora was preserved well. As for differences between the two ridge areas, communities dominated by Q. mongolica were distributed widely in Geumnamhonam-Jeongmaek because of the altitudes above sea level, and the latitude of this ridge area are higher than those of Honam-Jeongmaek. On the other hand, communities dominated by P. densiflora were distributed along with communities dominated by Q. mongolica, and communities dominated by Q. variabilis appeared in Honam-Jeongmaek because it is adjacent to the south coast. In quantitative vegetation analysis such as TWINSPAN and DCA, changes in species composition and the extracting environmental factors that cause the changes are important. To that end, the removal of accidental emergent species, the establishment of an investigation plan that assumes environmental factors, and the selection of the optimal analytical method suitable for the characteristics of the survey data are necessary.

• Korean Journal of Plant Resources
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• v.27 no.5
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• pp.518-533
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• 2014

The flora in the region of Daeheuksando ($N34^{\circ}37^{\prime}{\sim}34^{\circ}42^{\prime}$, $E125^{\circ}23^{\prime}{\sim}125^{\circ}38^{\prime}$) was surveyed from June 2010 to October 2011. The vascular plants from 22 field surveys were revealed to total of 496 taxa: 113 families, 316 genera, 446 species, four subspecies, 43 varieties and three forms. 124 taxa were the first records from this region. This field study discovered significant plants in various categories. Korean endemic plants numbered 7 taxa, and 6 taxa designated by Korean Forest Service as rare plants were investigated in this region. The taxa in the category II of rare and endangered plants and higher than the third degree among the floristic regional indicator plants designated by Korean Ministry of Environment were one taxon and 47 taxa, respectively. Especially, it was proved that Spiraea chartacea, Hosta yingeri, Hemerocallis hongdoensis and Saussurea polylepis were endemic to Heuksan-myeon including Daeheuksando in Korean peninsular. In addition, the naturalized plants of 46 taxa were recorded.

• Korean Journal of Plant Taxonomy
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• v.43 no.2
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• pp.146-160
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• 2013

The flora of vascular plants in the Mt. Cheonhwang, located at Miryang-si, Gyeongsangnam-do Province, was surveyed 16 times from March, 2009 to September, 2011. The result of this survey revealed 442 taxa in total, comprising 90 families, 252 genera, 387 species, 3 subspecies, 43 varieties, and 9 forms. Among the flora of this area, 14 taxa were plants endemic to Korea and 11 taxa were rare and endangered plants of Korea. The floristic regional indicator plants found in this area were 59 taxa: 2 taxa of grade V, 5 taxa of grade IV, 15 taxa of grade III, 16 taxa of grade II and 21 taxa of grade I. Alien plants in Korea numbered 21 taxa. In addition, 442 taxa were categorized by usage into 8 groups, as follows: 163 edible, 6 fiber, 125 medical, 76 ornamental, 163 pasturing, 4 industrial, 9 dyeing and 21 timber plants.

• Journal of Ginseng Research
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• v.33 no.3
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• pp.234-239
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• 2009

This study aims to establish the directions for the optimal nutrient contents determined by soil and leaf analyses. The study is to be used as a source for basic information in investigating the effects of nutritional environment on ginseng growth at the fields of Ansung region in Gyeonggi province. The physical property of soil porosity is closely related to ginseng growth, with more than 50% of good growth in the field. The optimal range of chemical properties in soil was analyzed as 0.20-0.28% T-N, 500-900 mg/kg Av.P$_2$O$_5$, and 2.3-3.5 cmol$^+$/kg Exch.Ca. The optimal range of inorganic nutrient contents in leaves was also analyzed. P value was less than 0.25%, and Mg was more than 0.22%. Other elements were not found clearly. The ratios of N/P, N/Mg, K/Mg, and Ca/P of leaves with good growth in the field showed 10<, 10-13, <14, 1<, respectively. In addition, the Ca:Mg:K ratio of the Exch.cation (cmol$^+$/kg) may be useful as an indicator in the assessment of plant growth in ginseng.

• Research in Plant Disease
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• v.19 no.2
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• pp.124-127
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• 2013

Black necrotic spots were observed from the fruits of paprika that were cultivating in a vinylhouse. The casual agents of the symptom were identified as several isolates of Pepper mild mottle virus (PMMoV) by responses of indicator plants, electron microscopy, and RT-PCR analysis. Symptoms of the viral disease were mild mottle in the young leaves, necrotic spots on the fruits and the fruit apex of paprika, but the symptoms were not shown on the mature leaves. All of the PMMoV isolates were determined as $P_{1.2.3}$ pathotypes from the biological responses on the chilli pepper lines used for discrimination of tobamovirus pathotypes. Pathogenicity of the PMMoV isolates was also confirmed using mechanical inoculation method to paprika seedlings. The coat protein (CP) genes of the PMMoV isolates were compared at the nucleotide and amino acid levels with the previously published PMMoV isolate. The isolates share 96 to 99% CP nucleotide identity among the isolates. The CP of $P_{1.2}$-pathotype PMMoV-P2 presented Met at position 139, But the CPs of $P_{1.2.3}$-pathotype PMMoVs from paprika showed Met to Asn substitution at the same position. This is the first report of identification of $P_{1.2.3}$-pathotype PMMoV isolates from paprika in Korea.

• Journal of the Korea Academia-Industrial cooperation Society
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• v.19 no.6
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• pp.137-146
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• 2018

The purpose of this study was to derive and analyze the hub facilities that occupy major positions in the vehicle movement networks of livestock facilities. For this purpose, this study used the KAHIS data provided by Animal and Plant Quarantine Agency. The hub facilities were derived from the degree centrality & betweenness centrality. The analysis results are summarized as follows. First, in a livestock facility's vehicle movement network, there are a small number of hub facilities with very high centrality indicator values compared to other facilities. Second, the hub facilities based on the degree centrality are the feed factory, the milk collecting center, slaughterhouse, slaughterhouse for chicken, and livestock markets. Third, the hub facilities based on the betweenness centrality are the livestock markets, the feed factory, and slaughterhouse. Fourth, hub facilities based on the degree centrality are concentrated in a particular area, but the hub facilities based on betweenness centrality are distributed relatively evenly.