• Title/Summary/Keyword: INDEX OF SHANNON'S DIVERSITY

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Species Composition and Diversity in Mid-altitudinal Moist Temperate Forests of the Western Himalaya

  • Gairola, Sumeet;Sharma, C.M.;Suyal, Sarvesh;Ghildiya, S.K.
    • Journal of Forest and Environmental Science
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    • v.27 no.1
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    • pp.1-15
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    • 2011
  • The present study was undertaken in middle altitudinal (1500 to 2500 masl) moist temperate forest of Mandal-Chopta area in the Garhwal region of Uttarakhand, India. The aim of the present study was to assess the variation in species composition and diversity in different vegetation layers viz. herb, shrub and tree, at different altitudes. Shannon-Wiener diversity index ($\bar{H}$), $Nha^{-1}$, total basal cover per hectare (G), Simpson concentration of dominance, Pielou Equitability, species richness (SR), Margalef index, Menheink index of species richness and ${\beta}$-diversity were calculated to understand community composition. Tree G ranged from 84.25 to 35.08 $m^2ha^{-1}$ and total stem density varied from 990 to 1470 Nha-1. Total SR (herb, shrub and trees) among different forest types ranged between 31 and 58. Maximum G of herb and shrub layers was recorded at lower altitudes between 1500 and 1650 masl. ${\beta}$-diversity was higher in herb layers as compared to tree and shrub layers. Dominance-diversity curves were also drawn to ascertain resource apportionment among various species in different forest types. Values of species diversity, $\bar{H}$, $Nha^{-1}$ and G were higher in the study area as compared to similar forests growing in other parts of Uttarakhand Himalaya.

Multi-metric Index Assessments of Fish Model and Comparative Analysis of Community (남한강 상류 수계에서 어류의 다변수 모델 지수 산정 및 군집지수와의 비교평가)

  • Lee, Jae-Hoon;Hong, Young-Pyo;An, Kwang-Guk
    • Korean Journal of Ecology and Environment
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    • v.40 no.2
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    • pp.327-336
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    • 2007
  • This study assessed ecological health using a multi-metric fish model from 15 sites in the headwater watershed of southern Han River during June${\sim}$August 1999 and then compared the health with conventional community diversity index to figure out differences between health and diversity index. For the analysis, we adopted 10 metric IBI model for regional applications. During this survey, total number of species sampled were 24 (6 families) and varied depending on magnitude of ecological disturbance and stream order. In the mountainous streams, mean proportion of sensitive and insectivore species was composed of 91% and 56%, respectively, indicating a potential healthy conditions. However, tolerant species with 66% and omnivore species with 76% were sampled from the 2nd order stream, which was shown deterioration in the physical habitat quality. In the overall watershed, mean IBI value was 38, judging as "fair" condition by the health criteria. Values of Individual IBI were closely associated with stream order and this pattern was similar to other mountainous streams showing low chemical pollutions and disturbance. Our comparison between IBI and diversity index over the stream order showed a distinct difference; Shannon-Weaver diversity index overestimated the actual community conditions and the variation range in the 2nd order stream was greater in the diversity index. Overall data suggest that the multi-metric approach may to a useful tool for stream ecosystem management and the conventional diversity index may not effective unless the stream order is considered for the stream evaluation.

Soil Nematode Fauna in Dokdo Island of Korea (독도의 토양 선충상)

  • Kim, Dong-Geun;Park, Byung-Yong;Ryu, Young-Hyun
    • Research in Plant Disease
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    • v.18 no.4
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    • pp.381-386
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    • 2012
  • Nematode fauna in Dokdo island was investigated for two years between 2008 and 2009. Population density and biomass were $239,500m^2$ (26,000-836,000) and $103.9mg/m^2$ (3.0-388.6), respectively. Total of 31 species of nematodes were identified : Acrobeloides is the most important genus with prominence value (PV) of 117.8, followed by Rhabditidae (PV = 81.9), Prismatolaimus (PV = 39.0), and Aphelenchoides (PV = 31.4). Among feeding group, bacteriovorus nematode composed 77% of density and 62% of biomass followed by plant-parasitic and fungivorus nematodes. A species of Pratylenchus having distinctive tail terminus is under study as a new species. Biological indices, Shannon and Wiener index (2.46), Simpson's diversity index (0.86), Species evenness (0.73), Species richness (1.30) indicate that nematode fauna in Dokdo island is diverse and unique. This study may give a general idea of nematode fauna at the Dokdo island.

A Study on the Stand Structure of Korean Fir Natural Forest in Naesorak through the Investigation of Stand Structure Diversity Features (구조다양성 표현인자 연구를 통한 내설악 전나무 고목림 (자연림) 구조 조사)

  • Youn, Young-Il
    • Korean Journal of Environmental Biology
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    • v.29 no.4
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    • pp.345-352
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    • 2011
  • We investigated 12 plots using Herles' diversity of structure feature calculation method, which is based on the Shannon-Weaver-Index for estimation of species diversity. This study sought to facilitate a more systematic understanding of the structure of the forest stands in the Korean fir natural forest in Naeseorak. Although the change in the forest structure is dependent on the change in phase, factors of the natural forest were confirmed by associating individual structure features. As shown in the results of diversity of structure features, the diversity of the structure of the fir tree natural forest in Naeseorak was relatively low. The association between species diversity and overall factors (diversity) related with the change in the structure was found to be weak. The association between the number of trees and the diversity of forest structure stands was moderate, showing that the higher the number of trees, the less diverse the forest structure is. In most of the investigated plots, stem volume and volume of dead tree were associated with the height of natural regeneration, but these were not associated with other factors. Height of natural regeneration was found to be correlated to stand density, crown area and crown class, whereas tree height and BHD did not have any association with other factors. Overall, the results of the investigation are helpful in understanding the change in the structure of Korean fir natural forest. Further investigation with more plots is required.

Fauna Diversity at the Deukjin River, Hapcheon-gun, Korea (합천군 덕진천의 동물상에 대한 다양성)

  • Huh, Man Kyu
    • Journal of Life Science
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    • v.28 no.1
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    • pp.105-109
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    • 2018
  • Biodiversity (or biological diversity) is defined as the variability of living organisms, the "diversity of life on Earth," and the complex relationships that make up ecosystems. This study aimed to investigate the spatial and temporal patterns in animal species composition and diversity at the Deukjin River, located in Hapcheon Province, Korea. The fauna community at the Deukjin River during 2016 season was identified with a total of 55 taxa, representing the following six classes: Mammalia (mammals), Actinopterygii (bony fish), Chondrichthyes (cartilaginous fish), Aves (birds), Amphibia (amphibians), Reptilia (reptiles), and invertebrates. The Berger - Parker index (BPI) for mammals varied from 0.233 (Station A) to 0.333 (Station D). The Shannon - Weaver index (H') and two diversity indexes (N1 and N2) for mammals and birds in the upper region were higher than those in the lower region. The values of ${\beta}$-diversity for animals varied from 0.229 for fish to 0.339 for invertebrates. The richness indices for animal taxa also varied among the stations and seasons. Station A showed considerably high richness in mammals, birds, and reptiles/amphibians. Although the richness indices (R1 and R2) for six animal kingdoms during the seasons were different from each other, the difference was not significant (p<0.05). The evenness indices for five animal kingdoms were different from each other, but again, the difference was not significant (p<0.05).

The Structure of Plant Community in Jungdaesa-Birobong Area, Odaesan National Park (오대산국립공원 중대사-비로봉 구간 식물군집구조)

  • Han, Bong-ho;Choi, Jin-woo;Noh, Tai-hwan;Kim, Dong-wook
    • Korean Journal of Environment and Ecology
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    • v.29 no.5
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    • pp.764-776
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    • 2015
  • This study aims to identify the structure of the plant community, and the ecological succession sere and the change in the forest ecosystem in Jungdaesa-Birobong area, Odaesan National Park_(i._e., located at high altitudes(over 1,000m)). It seeks to offer the basic data for the planning of vegetation management. In order to verify the status of the forest vegetation between Jungdaesa-Birobong, seventeen plots(size is $20m{\times}20m$) were set up as research sites at high altitudes. Importance value, distribution by diameter at breast height(DBH), the growth volume and age of the sample trees, similarity index and species diversity index of each survey plot were analysed. According to the results of DCA(Detrended Correspondence Analysis), one of the multivariate statistical techniques. It was found that the plant communities were classified into five groups: community I_(Quercus mongolica-Tilia amurensis community), community II_(Q. mongolica-Deciduous broad-leaved community), community III_(Q. mongolica-Pinus koraiensis community), community IV_(Abies holophylla-Q. mongolica community) and community V_(A. holophylla-Deciduous broad-leaved community). Community I which is dominated by Quercus mongolica and Deciduous broad-leaved communities is located at an altitude of over 1,300 meters(ranging from 1,335m to 1,495m), the community IV and V which are dominated by Abies holophylla are located at an altitude of under 1,200 meters(ranging from 1,115m to 1,175m) and the community II and III which include the main species of Quercus mongolica, Pinus koraiensis and Abies holophylla are located at an altitude of between 1,160 meters and 1,300 meters. The results showed that Quercus mongolica tends to have a higher importance value of woody species at a higher altitude while Abies holophylla tends to have higher importance value at a lower altitude. For the importance value woody species and -DBH class distribution, the communites I, II and III are expected to continuously maintain the present status. Whereas, for the influence of communities IV and V, Q. mongolica is predicted to be weakened. The age of sample trees was between 85 and 161; the average age was 123. The index of Shannon's Species diversity (H') showed heterogeneity was found among community I_(i._e., located at high altitude) and communities IV and V_(i._e., located at low altitude). As a results of analysing the index of Shannon's Species diversity (H': unit: $400m^2$), community III showed the highest diversity intex with 1.1109 followed by community II with 1.0475, community I with 1.0125, community IV with 0.9918 and community V with 0.8686. This study verified that the index of Shannon's species was significantly different by plant communities. For instance, when comparing the index of Shannon's species diversity in Quercus mongolica communities of this study and that of past relevant research, the value of index is very similar. However, the diversity index for the community which is dominated by Abies holophylla showed lower value when compared to the results from past relevant research.

Analysis on the Relationship between Biological Indices and Survey Area of Benthic Macroinvertebrates Using Mathematical Model (수학적 모형을 이용한 저서성 대형무척추동물 군집지수-조사면적 관계 해석)

  • Kong, Dongsoo;Kim, Ah Reum
    • Journal of Korean Society on Water Environment
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    • v.31 no.6
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    • pp.610-618
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    • 2015
  • This study was conducted to find out the influence of sample size (accumulated survey areas) on the seven biological indices of benthic macroinvertebrates. BMI, the index similar to Zeilika-Marvan’s saprobic index, tended to be independent on the variations of sample size. The other indices (Shannon-Weaver’s diversity, Margalef’s richness, Menhinick’s richness, Pielou’s evenness, and Lenat’s EPT index) showed the considerable variations along with the increase of sample size and environmental conditions. To get the appropriate index values, it should be sampled at least 6 replicates more based on 30×30cm Surber sampler. In addition, the habitat heterogeneity index of benthic macroinvertebrates suggested in this study, it will be able to be used for evaluating the heterogeneity of habitats.

Topic Modeling based Interdisciplinarity Measurement in the Informatics Related Journals (토픽 모델링 기반 정보학 분야 학술지의 학제성 측정 연구)

  • Jin, Seol A;Song, Min
    • Journal of the Korean Society for information Management
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    • v.33 no.1
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    • pp.7-32
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    • 2016
  • This study has measured interdisciplinarity using a topic modeling, which automatically extracts sub-topics based on term information appeared in documents group unlike the traditional top-down approach employing the references and classification system as a basis. We used titles and abstracts of the articles published in top 20 journals for the past five years by the 5-year impact factor under the category of 'Information & Library Science' in JCR 2013. We applied 'Discipline Diversity' and 'Network Coherence' as factors in measuring interdisciplinarity; 'Shannon Entropy Index' and 'Stirling Diversity Index' were used as indices to gauge diversity of fields while topic network's average path length was employed as an index representing network cohesion. After classifying the types of interdisciplinarity with the diversity and cohesion indices produced, we compared the topic networks of journals that represent each type. As a result, we found that the text-based diversity index showed different ranking when compared to the reference-based diversity index. This signifies that those two indices can be utilized complimentarily. It was also confirmed that the characteristics and interconnectedness of the sub-topics dealt with in each journal can be intuitively understood through the topic networks classified by considering both the diversity and cohesion. In conclusion, the topic modeling-based measurement of interdisciplinarity that this study proposed was confirmed to be applicable serving multiple roles in showing the interdisciplinarity of the journals.

Generalized Measure of Departure From Global Symmetry for Square Contingency Tables with Ordered Categories

  • Tomizawa, Sadao;Saitoh, Kayo
    • Journal of the Korean Statistical Society
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    • v.27 no.3
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    • pp.289-303
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    • 1998
  • For square contingency tables with ordered categories, Tomizawa (1995) considered two kinds of measures to represent the degree of departure from global symmetry, which means that the probability that an observation will fall in one of cells in the upper-right triangle of square table is equal to the probability that the observation falls in one of cells in the lower-left triangle of it. This paper proposes a generalization of those measures. The proposed measure is expressed by using Cressie and Read's (1984) power divergence or Patil and Taillie's (1982) diversity index. Special cases of the proposed measure include TomiBawa's measures. The proposed measure would be useful for comparing the degree of departure from global symmetry in several tables.

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Characteristics of Leaf Morphology and Genetic Variation of the Rare Woody Plant, Berchemia racemosa var. magna (희귀수종 먹넌출 엽의 형태적 특성과 유전변이)

  • Song, Jeong-Ho;Lim, Hyo-In;Jang, Kyung-Hwan;Han, Jingyu
    • Korean Journal of Plant Resources
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    • v.26 no.5
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    • pp.613-618
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    • 2013
  • This study was conducted to investigate the morphological characteristics of leaf and the genetic diversity of Berchemia racemosa var. magna which is only found in Anmyeon Island of South Korea. ANOVA test showed that there were significant differences among individuals within population in all 10 leaf characteristics. Average characteristics of 39 individuals were 11.8 cm in leaf length, 7.1 cm in leaf width, 1.67 in leaf index, 5.4 cm in upper 1/3 width, 6.2 cm in lower 1/3 width, 3.6 cm in petiole length, 0.19 mm in leaf thickness, 11.5 ea. in number of veins (left), 11.4 ea. in number of veins (right) and 61.7 $cm^2$ in leaf area, respectively. Except for leaf thickness (18.8%), petiole length (21.7%) and leaf area (22.0%), the coefficients of variation of most leaf characteristics were relatively low (<15.0%). A total of 50 bands was generated from 8 selected I-SSR primers. The estimates of genetic variation were 1.719 in effective number of alleles ($A_e$), 26.0% in proportion of polymorphic bands (P), 0.410 in expected heterozygosity ($H_e$) and 0.598 in Shannon's diversity index (S.I.), respectively. In spite of the small number and the limited distribution, the B. racemosa var. magna population in Anmyeon Island showed high genetic diversity.