• BMB Reports
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• v.40 no.2
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• pp.172-179
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• 2007

PCR-mediated recombination describes the process of in vitro chimera formation from related template sequences present in a single PCR amplification. The high levels of genetic redundancy in eukaryotic genomes should make recombination artifacts occur readily. However, few evolutionary biologists adequately consider this phenomenon when studying gene lineages. The cytosolic glyceraldehyde-3-phosphate dehydrogenase gene (GapC), which encodes a NADP-dependent nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase in the cytosol, is a classical lowcopy nuclear gene marker and is commonly used in molecular evolutionary studies. Here, we report on the occurrence of PCR-mediated recombination in the GapC gene family of Hibiscus tiliaceus. The study suggests that recombinant areas appear to be correlated with DNA template secondary structures. Our observations highlight that recombination artifacts should be considered when studying specific and allelic phylogenies. The authors suggest that nested PCR be used to suppress PCRmediated recombination.

• Journal of Microbiology and Biotechnology
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• v.19 no.7
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• pp.675-680
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• 2009

There is considerable interest in the isolation of potent radical scavenging compounds from natural resources to treat diseases involving oxidative stress. In this report, four new fungal metabolites including one new bisdihydroanthracenone derivative (1, eurorubrin), two new seco-anthraquinone derivatives [3, 2-O-methyl-9-dehydroxyeurotinone and 4, 2-O-methyl-4-O-(${\alpha}$-D-ribofuranosyl)-9-dehydroxyeurotinone], and one new anthraquinone glycoside [6,3-O-(${\alpha}$-D-ribofuranosyl)-questin], were isolated and identified from Eurotium rubrum, an endophytic fungal strain that was isolated from the inner tissue of the stem of the marine mangrove plant Hibiscus tiliaceus. In addition, three known compounds including asperflavin (2), 2-0-methyleurotinone (5), and questin (7) were also isolated and identified. Their structures were elucidated on the basis of spectroscopic analysis. All of the isolated compounds were evaluated for 1,1-diphenyl-2-picrylhydrazyl (DPPH) radical scavenging activity.

• Journal of the Korean Wood Science and Technology
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• v.52 no.4
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• pp.393-403
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• 2024

As an archipelagic country, Indonesia is surrounded by large and small islands. Many mangrove plant species are found along the coasts surrounding large and small islands. Besides their conservation value, mangrove plants provide various benefits, including the use of their leaves, fruit, bark, and wood as raw materials in pharmaceutical and other industries. Additionally, mangrove wood is a potential raw material for pulp and paper production. It is essential to study the fiber dimensions of the wood to identify the appropriate characteristics of raw material for pulp and paper. Therefore, in this study, we comprehensively analyzed the differences in the wood fiber dimensions of seven mangrove species from the Indramayu Regency, West Java Province, namely Avicennia alba, Bruguiera gymnorhiza, Bruguiera cylindrica, Hibiscus tiliaceus, Sonneratia ovata, Sonneratia caseolaris, and Excoecaria agallocha. For this analysis, maceration followed the Forest Product Laboratory guidelines, and preparation followed the Sass method. The fiber length, diameter, and lumen diameter were measured using a light microscope. Based on the values of the length and dimension derivatives, the fibers of these mangrove wood species were grouped into quality classes II or III for use as raw materials for the pulp and paper industry. The wood fibers of H. tiliaceus, A. alba, S. caseolaris, and E. agallocha met the quality class criterion II, whereas wood species fibers of B. gymnorhiza, B. cylindrica, and S. ovata met the quality class criterion III.