• Communications for Statistical Applications and Methods
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• 제22권6호
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• pp.575-587
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• 2015

The development in data collection techniques results in high dimensional data sets, where discrimination is an important and commonly encountered problem that are crucial to resolve when high dimensional data is heterogeneous (non-common variance covariance structure for classes). An example of this is to classify microbial habitat preferences based on codon/bi-codon usage. Habitat preference is important to study for evolutionary genetic relationships and may help industry produce specific enzymes. Most classification procedures assume homogeneity (common variance covariance structure for all classes), which is not guaranteed in most high dimensional data sets. We have introduced regularized elimination in partial least square coupled with QDA (rePLS-QDA) for the parsimonious variable selection and classification of high dimensional heterogeneous data sets based on recently introduced regularized elimination for variable selection in partial least square (rePLS) and heterogeneous classification procedure quadratic discriminant analysis (QDA). A comparison of proposed and existing methods is conducted over the simulated data set; in addition, the proposed procedure is implemented to classify microbial habitat preferences by their codon/bi-codon usage. Five bacterial habitats (Aquatic, Host Associated, Multiple, Specialized and Terrestrial) are modeled. The classification accuracy of each habitat is satisfactory and ranges from 89.1% to 100% on test data. Interesting codon/bi-codons usage, their mutual interactions influential for respective habitat preference are identified. The proposed method also produced results that concurred with known biological characteristics that will help researchers better understand divergence of species.

• 환경생물
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• 제21권4호
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• pp.337-341
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• 2003

Habitat heterogeneity can enhance biological diversity by providing variation in structural diversity. This paper reviewed heterogeneous habitat serves as a population stability and superior demographic performance (e.g., high density, survivorship, reproductive rate) can be observed compared with organisms with inferior demographic performance. The idea of habitat variation has been further developed in modelling. Furthermore the size and configuration (distribution) of a patch (of a particular habitat type) become effective for the stability of population through hiding places and food resources. Species diversity is related to habitat complexity that provides structural diversity to ground -dwelling organisms. Finally coarse woody debris can enhance habitat complexity thus stabilizing population fluctuation and increasing survivorship.

• The Korean Journal of Ecology
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• 제18권4호
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• pp.512-523
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• 1995

The central theme of Habital heterogeneity is to provide animals with habital complexity or structural diversity and to allow resource partitioning among individuals. In turn, the leads to population stability because prey can escape more easily with more hiding places causing less population fluctuation. Species diversity is characterized due to more potential niches both horizontally and verticall. Empirically, in homogeneous habitats population was less abundant, reproduction and survival were lower, spacing behavior, competition and dispersal were higher than in heterogeneous habitats. The results imply that diversity and conservation of species can be maintained through providing heterogeneous habitats.

• The Korean Journal of Ecology
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• 제20권4호
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• pp.251-258
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• 1997

Few attempts have been made to discover the ecological function of coarse woody debris (CWD) despite its importance to small mammal population. Twenty-five pitfall traps and a hundred live traps were placed in three sites with high amounts of CWD and three sites with low amounts of CWD. Eleven species were caught, and Peromyscus maniculatus was the most abundant (45.6%, n=605). Among 11 speices, abundance of Tamias townsendii and Clethronomys gapperi were higher in sites with high amounts of CWD than in sites with low amounts of CWD. Home range size was larger in breeding season than in non-breeding season indicating mating search. Resident time of Peromyscus maniculatus was longer in sites with high amounts of CWD implying better stability in population. The increasing amount of coarse woody debris (CWD) enhanced the habitat use by small mammals, and animals in high amounts of CWD were more abundant and stable in population fluctuation. This study, therefore, concludes that CWD is a critical habitat element for small mammals in forest ecosystem.

• The Korean Journal of Ecology
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• 제18권4호
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• pp.513-513
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• 1995

분리된 자원을 공급한다. 소척추동물과 포식자의 관계에서 동질로화된 서식지는 소척추동물의 생태적 지위를 단일화시켰으며, 숨을 곳의 급격한 감소로 인해 소척추동물의 군집 밀도를 큰 규모로 변동시킨다. 동질화된 서식지는 또한 서식지 구조의 복잡성을 사라지게 함으로써 종의 다양성이 감소된다는 연구결과를 검토하였다. 실험적연구에서 동질화된 서식지는 소척추동물의 서식밀도와 안정성의 감소, 세력권의 증가로 인한 종간경쟁, 분산의 증가로 특징지워졌다. 따라서 서식지의 이질성 유지는 종의 다양성과 보존의 기능을 높여주는데 기여함을 알게 되었다.

• The Korean Journal of Ecology
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• 제20권4호
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• pp.265-274
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• 1997

All landscapes are mosaics of habitat patches of different types. Therefore, there are always edged between habitat patches in a landscape. Forest animal has an important role in vegetation development and maintenance by seed dispersal around forest. Movement of animals depends on the spatially heterogeneous structure and pattern of vegetation landscapes because each animal has special habitats in a landscape. Especially, forast edge with high permeability and prey density is one of the important habitats to the animals. Therefore, understanding the ecological characteristics of the forest edges as a corridor connecting mosaic vegetation patches is necessa교 새 establish the strategies for the nature conservation and sustainable vegetation management. Under this idea, we examined the animal influenced on pine seeds as one of the method of monitoring the animal activity in mosaic vegetation. Man-made mosaic vegetations including open, edge and inner forests were carefully selected in the rural landscape. We carried out predation test on pine seeds during one year. A result was that damages on seed was more significant at forest edge than inner and open forest. Pine seed on seedbeds was mainly attacked by squirrels and mice than birds. Pine seed was damaged by squirrels in different types of vegetation by seasons. Rate of seed predation at forest edge was, in special, higher than that of other sites. According to this results, it is suggested that the relationship between animal behavior and spatial vegetation structure relating to human impact such as the distance from settlement to vegetation appeares to be in the rural vegetation landscape.

• 한국환경복원기술학회지
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• 제15권6호
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• pp.79-89
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• 2012

This study was compared to the differences in the habitat, species composition and community structure of revegetation and nature area in Korea. Plant number in plot of revegetation and nature area was 10.3 and 15.0 taxa, respectively, and coverage was 90.6 and 88.1%, respectively. Revegetation and nature area was very heterogeneous, due to low similarity index (0.38) and less common plants. Festuca arundinacea frequency (56.7%) was highest in revegetation area, and Oplismenus undulatifolius frequency (66.7%) was highest in nature area. Plant appearing of revegetation and nature area was 111 and 136 taxa, respectively. Herb appearing of revegetation and nature areas was 93 (83.3%) and 72 (52.9%) taxa, respectively, tree was 18 (16.2%) and 64 (47.1%) taxa, respectively. Plant communities of revegetation area was classified into Lespedeza bicolor, Indigofera amblyantha, Alnus sibirica, Festuca arundinacea, Eragrostis curvula, Miscanthus sinensis, Humulus japonicus, Setaria faberii, Rudbeckia bicolor, Pueraria lobata community. Plant communities of nature area was classified into Pinus densiflora, Quercus aliena, Quercus acutissima, Quercus variabilis, Quercus serrata, Castanea crenata, Pinus rigida, Robinia pseudoacacia, Populus tomentiglandulosa, Phyllostachys bambusoides community. Habitat, species composition and community structure of revegetation and nature area showed a large difference.

• Geomechanics and Engineering
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• 제33권4호
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• pp.401-414
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• 2023

Organic clays are ideal habitat for flora and fauna. From a geotechnical perspective, organic clays are soft, weak, variable, heterogeneous and flocculated. Portland cement is a universally common stabiliser. However, some organic acids in soil inhibit full hydration and expose cementation products to rapid dissolution. This paper investigates scopes for use of C₃S cement to enable durable cementation. Prospects of using PP fibre alongside with C₃S cement, scopes for partial replacement of C₃S cement with a plant-based nanosilica and evolution of binders are then investigated. Binding mixtures here mimic the natural functions of rhizoliths, amorphous phases, and calcites. Testing sample population include natural and fibre-reinforced clays, compact mixes of clay - C₃S cement, clay - nanobiosilica, and clay, C₃S cement and nanobiosilica. Benefits and constraints of C₃S cement and fibres for retaining the naturally flocculated structure of organic clays are discussed. Nanobiosilica provides an opportunity to cut the C₃S content, and to transition of highly compressive organic clays into an engineered, open-structured medium with >0.5 MPa compressive strength across the strains spanning from peak to 1.5-times peak.

• Journal of the Korean Wood Science and Technology
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• 제51권4호
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• pp.270-282
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• 2023

Lower termites need symbiotic microbes for cellulose digestion. Elizabethkingia miricola strain BM10 has been proposed as a symbiotic microbe that assists in low-temperature digestion and metabolism of Reticulitermes speratus KMT1, a termite on Bukhan Mountain, Seoul, Korea. In E. miricola strain BM10, β-glucosidase genes expressed at 10℃ were identified, and the psychrophilic enzymatic characteristic was confirmed by heterogeneously expressed proteins. Crude β-glucosidase in the culture broth of E. miricola strain BM10 showed specific enzymatic properties, and its substrate affinity was 4.69 times higher than that of Cellic CTec2. Among the genes proposed as β-glucosidase, two genes, bglB_1 and bglA_2, whose gene expression was more than doubled at 10℃ than at 30℃, were identified. They were heterogeneously expressed in Escherichia coli and identified as psychrophilic enzymes with an optimal reaction temperature of about 20℃-25℃. In this study, E. miricola strain BM10, a symbiotic bacterium of lower termites, produced psychrophilic β-glucosidases that contribute to the spread of the low-temperature habitat of a lower termite, R. speratus KMT1.

• 정보처리학회논문지:소프트웨어 및 데이터공학
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• 제12권9호
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• pp.407-418
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• 2023

MultiOn(Multi-Object Goal Visual Navigation)은 에이전트가 미지의 실내 환경 내 임의의 위치에 놓인 다수의 목표 물체들을 미리 정해준 일정한 순서에 따라 찾아가야 하는 매우 어려운 시각적 탐색 이동 작업이다. MultiOn 작업을 위한 기존의 모델들은 행동 선택을 위해 시각적 외관 지도나 목표 지도와 같은 단일 맥락 지도만을 이용할 뿐, 다양한 멀티모달 맥락정보에 관한 종합적인 관점을 활용할 수 없다는 한계성을 가지고 있다. 이와 같은 한계성을 극복하기 위해, 본 논문에서는 MultiOn 작업을 위한 새로운 심층 신경망 기반의 에이전트 모델인 MCFMO(Multimodal Context Fusion for MultiOn tasks)를 제안한다. 제안 모델에서는 입력 영상의 시각적 외관 특징외에 환경 물체의 의미적 특징, 목표 물체 특징도 함께 포함한 멀티모달 맥락 지도를 행동 선택에 이용한다. 또한, 제안 모델은 점-단위 합성곱 신경망 모듈을 이용하여 3가지 서로 이질적인 맥락 특징들을 효과적으로 융합한다. 이 밖에도 제안 모델은 효율적인 이동 정책 학습을 유도하기 위해, 목표 물체의 관측 여부와 방향, 그리고 거리를 예측하는 보조 작업 학습 모듈을 추가로 채용한다. 본 논문에서는 Habitat-Matterport3D 시뮬레이션 환경과 장면 데이터 집합을 이용한 다양한 정량 및 정성 실험들을 통해, 제안 모델의 우수성을 확인하였다.