• Title/Summary/Keyword: Habitat analysis

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Novel Sporichthyaceae Bacterium Strain K-07 Skin Barrier, Moisturizing and Anti-inflammatory Activity (신규 Sporichthyaceae Bacterium Strain K-07 배양액의 피부장벽, 보습 및 항염증 활성)

  • Lee, Dong-Geol;Kim, Minji;Kang, Seunghyun;Kim, Youn-Joon
    • Journal of the Society of Cosmetic Scientists of Korea
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    • v.43 no.2
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    • pp.137-147
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    • 2017
  • The human skin is an ecosystem that provides habitat to various microorganisms. These comprise the skin microbiome and provide numerous benefits in addition to maintaining a symbiotic relation with the host. Various metabolites generated by the skin microbiome exert beneficial effects such as strengthening the skin barrier, and anti-aging and anti-inflammatory functions. In this study, we isolated a novel bacterium, designated Sporichthyacae strain K-07, from the human skin. Analysis of 16S rRNA gene sequences showed that the newly found bacterium shares 93.4% homology with the genus Sporichthya, thus corroborating the discovery of a novel genus. We further analyzed the effect of the novel strain in vitro, by treating HaCaT cells with bacterial metabolite products. Treatment resulted in changes in the mRNA expression levels of filaggrin, claudin1, claudin4, SMase, CERS3, HAS3, aquaporin3, IL-6, TNF-${\alpha}$, TSLP, and TARC. Specifically, the levels of filaggrin, claudin1, claudin4, SMase, CERS3, HAS3, and aquaporin3 were higher in strain K-07 metabolite product-treated cells than in control cells. These results showed that metabolite products of the novel strain K-07 enhanced the skin barrier and exert anti-inflammatory effects. Therefore, these metabolite products could be potentially used for treatment of skin conditions.

A Study for Growth Density on the Pinus thunbergii and Pinus densiflora Communities in area of Busan, Korea (부산일대 곰솔림과 소나무림의 생육 밀도에 관한 연구)

  • Lee, Sang-Cheol;Hong, Suk-Hwan;Kim, Dong-Pil;Choi, Song-Hyun;Ahn, Mi-Yeon
    • Korean Journal of Environment and Ecology
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    • v.32 no.2
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    • pp.215-224
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    • 2018
  • The climate change is expected to weaken the habitat of Pinus densiflora and P. thunbergii, but they are still in high demand for planting. This study aims to suggest the rational community planting design based on natural forests' community structure in the southeastern region of Korea (warm temperate zone). For this study, we surveyed 22 plots of Pinus densiflora community and 60 plots of P. thunbergii community in Busan Metropolitan City which is located in the southeastern part of the Korean peninsula. We investigated the diameter of breath hight (DBH) and population of each tree layer in a $100m^2$ quadrat and used a regression analysis to derive a regression equation for estimating the mean number of planting individuals in each DBH. The coefficient between canopy layer's DBH and growth individuals per unit area ($100m^2$) was 0.700 for P. thunbergii communities and 0.533 for P. densiflora communities, indicating very high explanatory power by single factor. The predicted regression equation of between DBH and growth density was $Y=31.176e^{-0.055x}$ (X=DBH, Υ=growth individuals per $100m^2$) for P. thunbergii communities and $Y=38.351e^{-0.059x}$ for P. densiflora communities. Planting densities of P. densiflora communities and P. thunbergii communities in southeast region were higher than the central region.

An Study on Plant Classification System as Described in the Science Textbook of Elementary and Secondary School (초.중등학교 과학교과서(생물영역)의 식물 분류 체계에 관한 연구)

  • Yeau, Sung-Hee
    • Journal of The Korean Association For Science Education
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    • v.18 no.4
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    • pp.635-641
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    • 1998
  • The purpose of this study was to suggest a new direction of learning method in botany based on the analysis of a classification system and concepts in Science(Biology) textbooks of elementary and secondary school. Elementary and secondary school textbooks of Biology have been analyzed for plant classification system and concepts. Findings are summarized as belows. 1. In textbook of elementary school, the organization of life is grouped into Plantae and Animalia. Learning contents of plant are divided by the size and habitat. However, this system of classification might cause false concepts. Therefore, learning contents should be organized as whether they are flowering plants or not. 2. In a textbook of middle school, the organization of life is grouped into Plantae and Animalia. For a textbook of high school, it is grouped into three kingdoms; Plantae, Animalia and Prorista. With the idea of new age of Life Science, we should change the standards to 5 kingdoms; Plantae, Animalia, Proristae, Fungi and Monera. Moreover, it would be desirable if the concept of plant classification could be explained with a general outline, not by an individual interpretation focusing on characters of species only. In addition to the above indications, a learning course should provide present a standard classification according to a cognitive developemental level. It also has to teach students how to classify plant, in secondary school. Learning materials focusing on algae of the present system, but should be organized based on Seed plants.

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Movements and Home-range of Mallards by GPS-Mobile based Telementary (WT-200) in Korea (야생동물위치추적기(WT-200)를 이용한 청둥오리의 이동거리 및 행동권 연구)

  • Kang, Tehan;Kim, Dal-Ho;Cho, Hae-Jin;Shin, Young-Un;Lee, Hansoo;Suh, Jae-Hwa;Hwang, Jongkyung
    • Korean Journal of Environment and Ecology
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    • v.28 no.6
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    • pp.642-649
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    • 2014
  • Mallard (Anas platyrhynchos) is the abundant winter visitor in South Korea. Mallard migrates long distances between Russian Siberia and Korea. This species prefers a rice paddy area as their winter habitat. We captured birds using cannon-net, and attached the GPS-Mobile phone based Telemetry(WT-200) on Seven Mallards in the winter of 2011~2013. We were monitored wintering home-range and movement distance. We analyzed the tracking location data using ArcGIS 9.0 and calculated Kernel Density Estimation (KDE) and Minimum Convex Polygon (MCP). The average home-range in the wintering ground by MCP was $118.8km^2$(SD=70.1, n=7)and the maximum home-rang was $221.8km^2$ and the minimum was $27.7km^2$. Extents of home-range by KDE were $60.0km^2$(KDE 90%), $23.0km^2$(KDE 70%) and $11.6km^2$(KDE 50%). Mallard moved an average of 19.4 km from start site(attach to WT-200 site), maximum moved was 33.2 km and minimum moved was 9.4 km. The average distance of 0.8 km between GPS fixed point(range 0.2~1.6 km), maximum moved was 19.7 km. Mallard moved a very short distance in wintering season and showed a very high water-dependent trends in wintering site.

First Report of Asplenium yoshinagae (Aspleniaceae) from Korea and Its Phylogenetic Position Based on Morphology (미기록 가거꼬리고사리(꼬리고사리과)의 계통학적 위치)

  • Lee, Chang Shook;Kim, Jin Ohk;Lee, Nam Sook
    • Korean Journal of Plant Taxonomy
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    • v.38 no.2
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    • pp.79-91
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    • 2008
  • Asplenium yoshinagae (Aspleniaceae), previously known only from Japan, southwest China to Himalaya, was found in Gageo-do, Heuksan-myeon, Sinan-gun, Jeollanam-do. This species is similar to A. trichomonas, A. tripteropus, A. boreale, A. normale and A. oligophlebium by having gemmae and auricle of pinna, and distinguished from the latters by distinct stipe length, stalk of pinna, acute apex of pinna, length of indusium and shape of sorus. The Local name, Ga-geo-kko-ri-go-sa-ri, was newly given considering the locality. To reveal the interspecific relationships within the genus Asplenium in Korea, cladistic analysis was performed for 22 taxa of Asplenium as ingroup and 2 taxa of Diplazium as outgroup from Korea based on 20 morphological characters. As the results, the genus Asplenium seperated strongly from outgroup, and divided into 4 clades. Asplenium yoshinagae belong to the third clade. A. hondoense N. Murtakami & S. I. Hatanaka, which contained in the second clade, had treated as Hymenasplenium, but this results supported that this taxon may be contained in Asplenium, and also, Asplenium ruprechtii, not in Comptosorus. The morphological characters and illustrations of the species are provided together with photographs of habitat.

EXPERIMENTAL STUDY OF PERIPHERAL NERVE REGENERATION BY USING NON-TUBULAR NATURAL CELLULOSE MEMBRANE NERVE CONDUIT (비관형 천연 셀룰로오스막 도관을 이용한 말초신경 재생에 대한 실험적 연구)

  • Kim, Soung-Min;Lee, Jong-Ho;Lee, Suk-Keun
    • Journal of the Korean Association of Oral and Maxillofacial Surgeons
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    • v.32 no.4
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    • pp.295-307
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    • 2006
  • Styela clava, called non-native tunicate or sea squirt, is habitat which include bays and harbors in Korea and several sites in the sea faced world. We fabricate cellulose membrane nerve conduit (CMNC) from this native sea squirt skin, and evaluate the capacity of promoting peripheral nerve regeneration in the rat sciatic nerve defect model. After processing the pure cellulose membrane from the sea squirt skin as we already published before, CMNC was designed as a non-tubular sheet with 14 mm length and 4 mm width. Total eleven male Spraque-Dawley rats (12 weeks, weighing 250 to 300g) were divided into sham group (n=2), silicone tube grafted control group (n=3) and experimental group (n=6). Each CMNC grafted nerve was evaluated after 4, 8 and 12 weeks in the experimental group, and after 12 weeks, sciatic function was evaluated with sciatic function index (SFI) and gait analysis, and histomorphology of nerve conduit and the innervated tissues of sciatic nerve were all examined using image analyzer and electromicroscopic methods in the all groups. The regenerated axon and nerve sheath were found only in the inner surface of the CMNC after 4 weeks and became more thicker after 8 and 12 weeks. In the TEM study, CMNC grafted group showed more abundant organized myelinated nerve fibers with thickened extracellular matrix than silicone conduit grafted group after 12 weeks. The sciatic function index (SFI) and ankle stance angle (ASA) in the functional evaluation were $-47.2{\pm}3.9$, $35.5^{\circ}{\pm}4.9^{\circ}$ in CMNC grafted group (n=2) and $-80.4{\pm}7.4$, $29.2^{\circ}{\pm}5.3^{\circ}$ in silicone conduit grafted group (n=3), respectively. And the myelinated axon was 41.59% in CMNC group and 9.51% in silicone conduit group to the sham group. The development of a bioactive CMNC to replace autogenous nerve grafts offers a potential and available approach to improved peripheral nerve regeneration. As we already published before, small peptide fragment derived from the basement membrane matrix proteins of squirt skin, which is a kind of anchoring protein composed of glycocalyx, induced the effective axonal regeneration with rapid growth of Schwann cells beneath the inner surface of CMNC. So the possibilities of clinical application as a peripheral nerve regeneration will be able to be suggested.

Ecological Characteristics of Squalidus chankaensis tsuchigae (Cyprinidae) in Geum River, Korea (금강에 서식하는 참몰개 Squalidus chankaensis tsuchigae (Cyprinidae)의 생태 특성)

  • Byeon, Hwa-Keun;Yoon, Min-Ho
    • Korean Journal of Environment and Ecology
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    • v.30 no.5
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    • pp.888-895
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    • 2016
  • The population ecology (Ecological characteristics) of Squalidus chankaensis tsuchigae were investigated at Geum River from March to November, 2013. This species inhabited midstream of the river where was mostly covered with cobble and sand. The depth of the habitat was 30~60 cm and velocity of stream was 2.27~4.88 cm/sec. The sex ratio of female to male was 1 : 0.86. They were sexually mature when they were over two years of age. The spawning period was from June to July with water temperatures from $25^{\circ}C$ to $25^{\circ}C$. Sexually matured individuals appeared over the two year of age. Frequency analysis of total length indicated that the group with 55~70 mm in total length was one year old, the 71~90 mm was two years old, and the group over 91 mm was three years old. The average number of eggs in the ovaries was estimated as 2,219 per matured female. The number of matured eggs size in ovaries was 0.64~0.98 (mean: 0.85) mm. Calulation length-weight relation of S. chankaensis tsuchigae show the value of contant a as 0.0002 and b as 2.81, and condition factor (K) was 1.06 on average. The stomach contents were Cyanophyta, Chlorophyta, Bacillariophyta, Crustaceae, Copepoda, Nematota, Actithocephala, and Ephemeroptera, Hemiptera, Diptera, and Trichoptera that belong to Aquatic insect, and dormant bud of Pectinatella that belongs to Phylactolaemata. The diet of S. chankaensis tsuchigae was omnivorous, mainly vegetable feed on attached algae (filament form), and mainly animality feeded on benthic invertebrates such as Chironomidae larvae.

Environment and Vegetation Characteristics of Aconitum austrokoreense Koidz. habitats (세뿔투구꽃의 자생지 식생과 환경특성)

  • Park, Jeong-Geun;Pi, Jung-hun;Jung, Ji-young;Park, Jeong-seok;Yang, Hyung-ho;Lee, Cheul-ho;Suh, Gang-uk;Son, Sung-won
    • Korean Journal of Environment and Ecology
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    • v.30 no.5
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    • pp.896-907
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    • 2016
  • The habitat characteristics of Aconitum austrokoreense Koidz. were investigated to provide basic data for conservation and restoration. The altitude ranged from 260m to 728m with inclinations of $4-39^{\circ}$. As a result of vegetation survey within natural populations, a total of 147 taxa were identified inside 20 quadrates in 7 natural habitats. The importance value of Aconitum austrokoreense was 23.0% based on the coverage and frequency of the herbaceous layer and sat is more dominant. Species diversity was 1.23, and dominace and evenness were found to be 0.22 and 0.77, respectively. The soil type were silty loam (four sites), sandy loam (two sites) and loam (one site). The average field organic matter was 7.83% and the total nitrogen and pH were 0.35, and 5.69. Correlation analysis between environmental factors and population characteristic showed the correlations between chlorophyll content and slope, flowering rate and soil humidity. Conservation on habitats conditions is important for stable maintenance the flora and the surrounding area including habitats has to be designated a protection area for habitats conservation.

Fish Distribution and Management Strategy for Improve Biodiversity in Created Wetlands Located at Nakdong River Basin (낙동강 신규조성 습지의 어류 분포와 종다양성 증진을 위한 관리방안)

  • Choi, Jong Yun;Kim, Seong-Ki;Park, Jung-Soo;Kim, Jeong-Cheol;Yoon, Jong-Hak
    • Korean Journal of Environment and Ecology
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    • v.32 no.3
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    • pp.274-288
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    • 2018
  • This study investigated the environmental factors and fish assemblage in 42 wetlands between spring and autumn of 2017 to evaluate the fish distribution and deduce the management strategy for improving biodiversity in created wetlands located at the Nakdong River basin. The investigation identified a total of 30 fish species and found that the most of wetlands were dominated by exotic fishes such as Micropterus salmoides and Lepomis macrochirus. Fish species such as Rhinogobius brunneus, Opsariichthys uncirostris amurensis, Zacco platypus were less abundant in the area with high density of Micropterus salmoides (static area) because they preferred the environment with active water flow. The pattern analysis of fish distribution in each wetland using the self-organizing map (SOM) showed a total of 24 variables (14 fish species and 10 environmental variables). The comparison of variables indicated that the distribution of fish species varied according to water depth and plant cover rate and was less affected by water temperature, pH, and dissolved oxygen. The plant cover rate was strongly associated with high fish density and species diversity. However, wetlands with low plant biomass had diversity and density of fish species. The results showed that the microhabitat structure, created by macrophytes, was an important factor in determining the diversity and abundance of fish communities because the different species compositions of macrophytes supported diverse fish species in these habitats. Based on the results of this study, we conclude that macrophytes are the key components of lentic freshwater ecosystem heterogeneity, and the inclusion of diverse plant species in wetland construction or restoration schemes will result in ecologically healthy food webs.

Genetic Diversity and Population Structure of the Endangered Fish Pseudopungtungia nigra (Cyprinidae) from the Geum and Mankyung Rivers Assessed by Amplified Fragment Length Polymorphism (금강과 만경강에 서식하는 멸종위기 어류 감돌고기 Pseudopungtungia nigra의 AFLP에 의한 유전 다양성 및 집단구조)

  • Kim, Keun-Sik;Yun, Young-Eun;Kang, Eon-Jong;Yang, Sang-Geun;Bang, In-Chul
    • Korean Journal of Ichthyology
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    • v.21 no.2
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    • pp.76-80
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    • 2009
  • Genetic diversity and genetic structure within the Geum River and Mankyung River populations of the Korean endangered Black shinner (Pseudopungtungia nigra) were assessed by amplified fragment length polymorphism (AFLP). AFLP analysis using five primer combinations generated 447 AFLP bands with 64.1% polymorphism (Geum River 74.6% and Mankyung River 53.6%). The heterozygosities within the two populations were calculated to be 0.170 and 0.104, respectively. Their average genetic diversities are 0.240 and 0.147, respectively. The pairwise Fst value (0.150) indicated distinct genetic differentiation between the two populations. A UPGMA dendrogram based on genetic distance among the individuals revealed a division corresponding to geographical regions, with low genetic variation within the Mankyung River population, and low genetic distance (0.026) between the two populations. Consequently, the two populations may have the same genetic origin The Geum River population will be more suitable than the Mankyung River population for conservation plans to increase the population sizes. Genetic and habitat management will be necessary for the Mankyung River population.