• Title/Summary/Keyword: HOST

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Platform of Hot Pepper Defense Genomics: Isolation of Pathogen Responsive Genes in Hot Pepper (Capsicum annuum L.) Non-Host Resistance Against Soybean Pustule Pathogen (Xanthomonas axonopodis pv. glycines)

  • Lee, Sang-Hyeob;Park, Do-Il
    • The Plant Pathology Journal
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    • v.20 no.1
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    • pp.46-51
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    • 2004
  • Host resistance is usually parasite-specific and is restricted to a particular pathogen races, and commonly is expressed against specific pathogen genotypes. In contrast, resistance shown by an entire plant species to a species of pathogen is known as non-host resistance. Therefore, non-host resistance is the more common and broad form of disease resistance exhibited by plants. As a first step to understand the mechanism of non-host plant defense, expressed sequence tags (EST) were generated from a hot pepper leaf cDNA library constructed from combined leaves collected at different time points after inoculation with non-host soybean pustule pathogen (Xanthomonas axonopodis pv. Glycines; Xag). To increase gene diversity, ESTs were also generated from cDNA libraries constructed from anthers and flower buds. Among a total of 10,061 ESTs, 8,525 were of sufficient quality to analyze further. Clustering analysis revealed that 55 % of all ESTs (4685) occurred only once. BLASTX analysis revealed that 74% of the ESTs had significant sequence similarity to known proteins present in the NCBI nr database. In addition, 1,265 ESTs were tentatively identified as being full-length cDNAs. Functional classification of the ESTs derived from pathogen-infected pepper leaves revealed that about 25% were disease- or defense-related genes. Furthermore, 323 (7%) ESTs were tentatively identified as being unique to hot pepper. This study represents the first analysis of sequence data from the hot pepper plant species. Although we focused on genes related to the plant defense response, our data will be useful for future comparative studies.

Interaction Study of Soybean mosaic virus Proteins with Soybean Proteins using the Yeast-Two Hybrid System

  • Seo, Jang-Kyun;Hwang, Sung-Hyun;Kang, Sung-Hwan;Choi, Hong-Soo;Lee, Su-Heon;Sohn, Seong-Han;Kim, Kook-Hyung
    • The Plant Pathology Journal
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    • v.23 no.4
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    • pp.281-286
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    • 2007
  • Interactions between viral proteins and host proteins are essential for virus replication. Especially, translation of viral genes completely depends on the host machinery. In potyviruses, interactions of genome-linked viral protein (VPg) with host translation factors including eIF4E, eIF(iso)4E, and poly(A)-binding protein (PABP) has previously been characterized. In this study, we investigated interactions between Soybean mosaic virus (SMV) viral proteins and host translation factors by yeast two-hybrid system. SMV VPg interacted with eIF4E, eIF(iso)4E, and PABP in yeast two-hybrid system, while SMV helper component proteinase (HC-pro) interacted with neither of those proteins. The interaction between SMV NIb and PABP was also detected. These results are consistent with those reported previously in other potyviruses. Interestingly, we found reproducible and specific interactions between SMV coat protein (CP) and PABP. Deletion analysis showed that the region of CP comprising amino acids 116 to 206 and the region of PABP comprising amino acids 520 to 580 are involved in CP/PABP interactions. Soybean library screening with SMV NIb by yeast two-hybrid assay also identified several soybean proteins including chlorophyll a/b binding preprotein, photo-system I-N subunit, ribulose 1,5-biphosphate carboxylase, ST-LSI protein, translation initiation factor 1, TIR-NBS type R protein, RNA binding protein, ubiquitin, and LRR protein kinase. Altogether, these results suggest that potyviral replicase may comprise a multi-protein complex with PABP, CP, and other host factors.

Characteristics and Pathogenicity of Host Range Expanded Recombinant Viruses in Insect Cells (숙주범위가 넓어진 재조합 바이러스의 세포주에서의 특성 및 병원성)

  • Kim, Hye-Sung;Woo, Soo-Dong;Kim, Woo-Jin;Choi, Jae-Young;Jin, Byung-Rae;Lee, Youn-Hyung;Kang, Seok-Kwon
    • The Journal of Korean Society of Virology
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    • v.27 no.1
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    • pp.29-37
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    • 1997
  • To use recombinant viruses with wider host range as viral insecticides, we investigated the characteristics and pathogenicity of host range expanded recombinant viruses in insect cells. We compared host range expanded recombinant viruses, RecS-B6 and RecB-8, constructed by cotransfection of Autographa californica nuclear polyhedrosis virus (AcNPV) and Bombyx mori NPV (BmNPV), to host range expanded AcNPV, Ac-BH, by substitution of the 0.6 Kb fragment of the BmNPV helicase gene. Restriction endonuclease profiles of RecS-B6 and RecB-8 DNAs were different from those of parent viruses. Nucleotide sequence analysis of the 0.6 Kb region in the putative helicase gene of RecS-B6 and RecB-8 showed that their structures were identical to the counterpart region of BmNPV. Comparison of viral replication of these recombinant viruses in Sf-21 and BmN-4 cells showed that Ac-BH, compared to wild type viruses, replicated well in BmN-4 cells but poorly in Sf-21 cells. In contrast, RecS-B6 and RecB-8 replicated relatively well in both cells compared to parent viruses. These results may imply that random genomic recombinant viruses, RecS-B6 and RecB-8, possess better potential as viral pesticides than helicase-mediated recombinant virus, Ac-BH.

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Newly Listed Host Plants of Ectinohoplia rufipes in Korean Golf Courses (골프장에서 주황긴다리풍뎅이(Ectinohoplia rufipes)의 신 기주 식물)

  • Lee, Sang-Myeong;Lee, Dong-Woon;Chung, Jae-Min;Kim, Young-Sub
    • Asian Journal of Turfgrass Science
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    • v.22 no.2
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    • pp.179-184
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    • 2008
  • Host plants of Ectinohoplia rufipes (Mitschulsky) were investigated in golf courses in Gapyeong, Gyeonggi. Ten plant species in 7 families were observed to be fed on from golf courses. Thus, total number of host plants of Ectinohoplia rufipes were 94 species in 30 families. Rhododendron indicum and Rhododendron japonicum for. flavum in Ericaceae, Euonymus alata for. ciliato-dentatus in Celastraceae, Ulmus davidiana for. suberosa in Ulmaceae, Malus pumila var. dulcissima and Malus baccata in Rosaceae, Weigela florida for. subricdor in Caprifoliaceae, Betula platyphylla var. japonica in Betulaceae, Salix purpurea var. japonica in Salicaceae, and Quercus palustris in Fagaceae were newly listed host plants of Ectinohoplia rufipes in golf courses. Betula platyphylla var. japonica, Malus pumila var. dulcissima and Quercus palustris were heavily damaged host plants of Ectinohoplia rufipes.

Diversity of Endophytic Fungi Isolated from Pinus densiflora and Larix kaempferi in Mt. Oser, Korea (충남 오서산에 분포하는 소나무와 일본잎갈나무에서 분리한 내생균의 다양성)

  • Eo, Ju-Kyeong;Kim, Chang-Kyun;Lee, Hyang Burm;Eom, Ahn-Heum
    • The Korean Journal of Mycology
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    • v.41 no.3
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    • pp.137-141
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    • 2013
  • Diversity of endophytic fungi of two species associated with host plants, Pinus densiflora and Larix kaempferi in Mt. Oser were investigated. Endophytic fungi were isolated from surface sterilized leaves of the 13 host plants and identified by morphological traits and rDNA ITS sequences analysis. Totally 37 isolates were discovered and identified into 17 taxa. Of them, 59% isolates belonged to Leotiomycetes, 30% isolates Sordariomyetes, 8% isolates Dothideomycetes and 3% isolates Agaricomycetes. Results showed a similar diversity pattern with previous studies. Also, species diversity (H') of endophytic fungi isolated from L. kaempferi was higher than that from P. densiflora. The endophytic species composition showed significant differences between host plants. Particularly, taxon of Lophodermium is a major genus in the host plants. However, critical research of the endophytic species diversities within the genus in Korea is required. The communities of endophytic fungi isolated in this study showed differences in diversities and species composition between host plants.

Powdery Mildew Fungi and Their Host Plants from Kangwon Province (강원도(江原道)에서 채집(採集)한 흰가루병균(病菌)과 기주식물(寄主植物))

  • Shin, Hyeon-Dong
    • The Korean Journal of Mycology
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    • v.22 no.3
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    • pp.229-246
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    • 1994
  • Powdery mildew fungi from 246 different species of host plants were collected at Kangwon province during 1989-1993 years. They were identified and classified into 13 genera and 83 species by examining various morphological characteristics of taxonomic value. Most of host plants were infected with one species of powdery mildew fungus, but eight plant species with two or three different mildews. Among 246 host plants collected, 43 species were added as the new host plants of powdery mildew fungi in Korea. Two Oidium spp. from Hibiscus and several Compositae plants were described to suggest their taxonomic problems.

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Security Gateway Extension Mechanism for Session Recovery in Virtual Private Network (가상 사설망에서의 세션 복구 서비스를 위한 Security Gateway 확장 메커니즘)

  • Kim, Jeong-Beom;Lee, Yun-Jung;Park, Nam-Sub;Kim, Tai-Yun
    • Journal of KIISE:Information Networking
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    • v.29 no.1
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    • pp.77-85
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    • 2002
  • The surge in use of networks has recently increased demands for cryptography. Cryptography, however, can cause various problems because of difficulty of key management. A lot of researchers have been concentrating on the key recovery technique to eliminate the reverse effect of using these kinds of security and to promote positive aspects of using it. They have suggested many key recovery techniques up to the present. we propose a mechanism as a solution, which are employed to reduce the time needed to reconnect SG and the host in Host-to-Gateway in VPNs supporting IPsec, in case they are disconnected. This new mechanism using KRFSH stores information at each session in advance so that users can recall the session information when needed to rebuild the tunnel between SG and the host in a VPN. As a result, the mechanism built into SG will solve the problems above in host-to-gateway VPNs using IPsec.

Effect of PRX-1 Downregulation in the Type 1 Diabetes Microenvironment

  • Yoo, Jong-Sun;Lee, Yun-Jung;Hyung, Kyeong Eun;Yoon, Joo Won;Lee, Ik Hee;Park, So-Young;Hwang, Kwang Woo
    • The Korean Journal of Physiology and Pharmacology
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    • v.16 no.6
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    • pp.463-468
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    • 2012
  • Type 1 diabetes (T1D) is caused by dysregulation of the immune system in the pancreatic islets, which eventually leads to insulin-producing pancreatic ${\beta}$-cell death and destabilization of glucose homeostasis. One of the major characteristics of T1D pathogenesis is the production of inflammatory mediators by macrophages that result in destruction or damage of pancreatic ${\beta}$-cells. In this study the inflammatory microenvironment of T1D was simulated with RAW264.7 cells and MIN6 cells, acting as macrophages and pancreatic ${\beta}$-cells respectably. In this setting, peroxiredoxin-1, an anti-oxidant enzyme was knocked down to observe its functions in the pathogenesis of T1D. RAW264.7 cells were primed with lipopolysaccharide and co-cultured with MIN6 cells while PRX-1 was knocked down in one or both cell types. Our results suggest that hindrance of PRX-1 activity or the deficiency of this enzyme in inflammatory conditions negatively affects pancreatic ${\beta}$-cell survival. The observed decrease in viability of MIN6 cells seems to be caused by nitric oxide production. Additionally, it seems that PRX-1 affects previously reported protective activity of IL-6 in pancreatic ${\beta}$ cells as well. These results signify new, undiscovered roles for PRX-1 in inflammatory conditions and may contribute toward our understanding of autoimmunity.

Host-Parasite System in a Red Tide Dinoflagellate Prorocentrum minimum: (1) Life Cycle Stages of the Parasitic Dinoflagellate Amoebophrya sp. (적조생물 Prorocentrum minimum의 숙주-기생자 배양체: (1) 기생성 와편모류 Amoebophrya sp.의 생활사 단계)

  • 김영길;박명길;이원호
    • The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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    • v.7 no.4
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    • pp.2221-2221
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    • 2002
  • The first laboratory culture of host-parasite system of Prorocentrum minimum- Amoebophrya sp. was established by single cell isolation method. Here, we report the life cycle stages of the parasitic dinoflagellate. Amoebophrya sp. of the red tide dinoflagellate P. minimum as observed by light and epifluorescence microscopy. Infections developed inside the nucleus of P. minimum. The trophont developed to occupy almost all the intracellular space of the host at its late stage. The fully developed trophont finally ruptured through the host cell. “Vermiform stage”, the free-swimming extracellular lift cycle stage is followed by another stage for the sudden release of many individual dinospores. Our laboratory strain of the host-parasite system for P. minimum, a causative species fur the huge red tides in spring and summer in Korean coastal waters, could be a useful living material for the in situ biological control of harmful algal blooms.

Host-Parasite System in a Red Tide Dinoflagellate Prorocentrum minimum:(1) Life Cycle Stages of the Parasitic Dinoflagellate Amoebophrya sp. (적조생물 Prorocentrum minimum의 숙주-기생자 배양체: (1) 기생성 와편모류 Amoebophrya sp.의 생활사 단계)

  • 김영길;박명길;이원호
    • The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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    • v.7 no.4
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    • pp.221-225
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    • 2002
  • The first laboratory culture of host-parasite system of Prorocentrum minimum- Amoebophrya sp. was established by single cell isolation method. Here, we report the life cycle stages of the parasitic dinoflagellate. Amoebophrya sp. of the red tide dinoflagellate P. minimum as observed by light and epifluorescence microscopy. Infections developed inside the nucleus of P. minimum. The trophont developed to occupy almost all the intracellular space of the host at its late stage. The fully developed trophont finally ruptured through the host cell. “Vermiform stage”, the free-swimming extracellular lift cycle stage is followed by another stage for the sudden release of many individual dinospores. Our laboratory strain of the host-parasite system for P. minimum, a causative species fur the huge red tides in spring and summer in Korean coastal waters, could be a useful living material for the in situ biological control of harmful algal blooms.