• Title/Summary/Keyword: Grouping Tool

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Metabolomics-Based Chemotaxonomic Classification of Streptomyces spp. and Its Correlation with Antibacterial Activity

  • Lee, Mee Youn;Kim, Hyang Yeon;Lee, Sarah;Kim, Jeong-Gu;Suh, Joo-Won;Lee, Choong Hwan
    • Journal of Microbiology and Biotechnology
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    • v.25 no.8
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    • pp.1265-1274
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    • 2015
  • Secondary metabolite-based chemotaxonomic classification of Streptomyces (8 species, 14 strains) was performed using ultraperformance liquid chromatography-quadrupole-time-offlight-mass spectrometry with multivariate statistical analysis. Most strains were generally well separated by grouping under each species. In particular, S. rimosus was discriminated from the remaining sevens pecies (S. coelicolor, S. griseus, S. indigoferus, S. peucetius, S. rubrolavendulae, S. scabiei, and S. virginiae) in partial least squares discriminant analysis, and oxytetracycline and rimocidin were identified as S. rimosus-specific metabolites. S. rimosus also showed high antibacterial activity against Xanthomonas oryzae pv. oryzae, the pathogen responsible for rice bacterial blight. This study demonstrated that metabolite-based chemotaxonomic classification is an effective tool for distinguishing Streptomyces spp. and for determining their species-specific metabolites.

SIMMER extension for multigroup energy structure search using genetic algorithm with different fitness functions

  • Massone, Mattia;Gabrielli, Fabrizio;Rineiski, Andrei
    • Nuclear Engineering and Technology
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    • v.49 no.6
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    • pp.1250-1258
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    • 2017
  • The multigroup transport theory is the basis for many neutronics modules. A significant point of the cross-section (XS) generation procedure is the choice of the energy groups' boundaries in the XS libraries, which must be carefully selected as an unsuitable energy meshing can easily lead to inaccurate results. This decision can require considerable effort and is particularly difficult for the common user, especially if not well-versed in reactor physics. This work investigates a genetic algorithm-based tool which selects an appropriate XS energy structure (ES) specific for the considered problem, to be used for the condensation of a fine multigroup library. The procedure is accelerated by results storage and fitness calculation speedup and can be easily parallelized. The extension is applied to the coupled code SIMMER and tested on the European Sustainable Nuclear Industrial Initiative (ESNII+) Advanced Sodium Technological Reactor for Industrial Demonstration (ASTRID)-like reactor system with different fitness functions. The results show that, when the libraries are condensed based on the ESs suggested by the algorithm, the code actually returns the correct multiplication factor, in both reference and voided conditions. The computational effort reduction obtained by using the condensed library rather than the fine one is assessed and is much higher than the time required for the ES search.

A Study on the Application of the Pattern Language to Suburban Houses in Korea - Focused on the Award-Winning Houses - (국내 전원주택의 패턴언어 적용특성에 관한 연구 - 주택작품 수상작을 중심으로 -)

  • Jung, Sung-Wook;Kim, Suk-Young
    • Korean Institute of Interior Design Journal
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    • v.27 no.2
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    • pp.118-127
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    • 2018
  • To complete the appropriate pattern language as a planning tool for suburban houses in Korea, this study reviews the characteristics in applying the pattern language to suburban houses in Korea by creating the pattern application examination chart regarding 110 patterns in architecture and evaluating and analyzing 24 examples in terms of the applicability of the patterns, the results of which are as set forth below. Firstly, when grouping the upper 31 patterns by similar characteristics, it was distinguished by the characteristics relating to (i) securing of lighting and viewing; (ii) placing of buildings and space and adjustment of inside and outside privacy through such placing; (iii) placing of proper motion line and functions of adjacent space according to such motion line; and (iv) determining of important space such as personal room, area for couple or children, staircase, entrance, hallway, etc. Secondly, when analyzing the reasons that the lower 41 patterns have not been applied, it was characterized by (i) the work space not suitable for suburban houses or the patterns suitable for commercial space; (ii) the patterns not suitable in Korea due to cultural differences; and (iii) the patterns whose applicability cannot be confirmed due to the limitation of examples and materials used in this study. Thirdly, the analysis of each pattern group (A through M) revealed that the pattern groups D and G are rarely related to suburban houses and J and M are patterns whose applicability cannot be determined in this study. Another characteristics is that the pattern groups B, E, F, I and L which obtain high scores in applicability are importantly reflected in planning for suburban houses in Korea. Fourthly, this study renders the average score of applicability, and the applicability rate, of the examples and confirms the number of the patterns applied in confirmity, patterns partially or potentially applied and patterns not applied at all.

Genetic characterization of microsporidians infecting Indian non-mulberry silkworms (Antheraea assamensis and Samia cynthia ricini) by using PCR based ISSR and RAPD markers assay

  • Hassan, Wazid;Nath, B. Surendra
    • International Journal of Industrial Entomology and Biomaterials
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    • v.30 no.1
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    • pp.6-16
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    • 2015
  • This study established the genetic characterisation of 10 microsporidian isolates infecting non-mulberry silkworms (Antheraea assamensis and Samia cynthia ricini) collected from biogeographical forest locations in the State of Assam, India, using PCR-based markers assays: inter simple sequence repeat (ISSR) and random amplified polymorphic DNA (RAPD). A Nosema type species (NIK-1s_mys) was used as control for comparison. The shape of mature microsporidian spores were observed oval to elongated, measuring 3.80 to $4.90{\mu}m$ in length and 2.60 to $3.05{\mu}m$ in width. Fourteen ISSR primers generated reproducible profiles and yielded 178 fragments, of which 175 were polymorphic (98%), while 16 RAPD primers generated reproducible profiles with 198 amplified fragments displaying 95% of polymorphism. Estimation of genetic distance coefficients based on dice coefficients method and clustering with un-weighted pair group method using arithmetic average (UPGMA) analysis was done to unravel the genetic diversity of microsporidians infecting Indian muga and eri silkworm. The similarity coefficients varied from 0.385 to 0.941 in ISSR and 0.083 to 0.938 in RAPD data. UPGMA analysis generated dendrograms with two microsporidian groups, which appear to be different from each other. Based on Euclidean distance matrix method, 2-dimensional distribution also revealed considerable variability among different identified microsporidians. Clustering of these microsporidian isolates was in accordance with their host and biogeographic origin. Both techniques represent a useful and efficient tool for taxonomical grouping as well as for phylogenetic classification of different microsporidians in general and genotyping of these pathogens in particular.

Comparison of journal clustering methods based on citation structure (논문 인용에 따른 학술지 군집화 방법의 비교)

  • Kim, Jinkwang;Kim, Sohyung;Oh, Changhyuck
    • Journal of the Korean Data and Information Science Society
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    • v.26 no.4
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    • pp.827-839
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    • 2015
  • Extraction of communities from a journal citation database by the citation structure is a useful tool to see closely related groups of the journals. SCI of Thomson Reuters or SCOPUS of Elsevier have had tried to grasp community structure of the journals in their indices according to citation relationships, but such a trial has not been made yet with the Korean Citation Index, KCI. Therefore, in this study, we extracted communities of the journals of the natural science area in KCI, using various clustering algorithms for a social network based on citations among the journals and compared the groups obtained with the classfication of KCI. The infomap algorithm, one of the clustering methods applied in this article, showed the best grouping result in the sense that groups obtained by it are closer to the KCI classification than by other algorithms considered and reflect well the citation structure of the journals. The classification results obtained in this study might be taken consideration when reclassification of the KCI journals will be made in the future.

An Analysis of Geography, Biography and History Class in UDC and Some Suggestions on their Applicable Principles into KDC (UDC 지리.전기.역사류의 특성과 KDC 에서의 적용 방안)

  • 이창수
    • Journal of Korean Library and Information Science Society
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    • v.34 no.3
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    • pp.125-145
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    • 2003
  • The core version of UDC(Universal Decimal Classification) is available in an electronic form called MRF(Master Reference File) which supports the maintenance of the quality of the scheme as a working tool for the UDCC(UDC Consortium) by annual reviewing its content and initiating revisions and extensions. In this paper, we discuss outcomes of our in-depth analysis of the geography, biography and history disciplines in UDC focused on the its evolutions and characteristics, including the common auxiliaries of place, the common auxiliaries of time and the common auxiliaries of race, ethnic grouping and nationality. Based on the in-depth analysis, we suggested some ideas which can be applied into the history class of KDC(Korean Decimal Classification). In particular, its principle of combination methods in the history of individual regions, the way of its assignment of physical geography and human geography in the same division, the possibilities of the extension of the table of geographical division and the adaptation of the table of chronological division in KDC.

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Recognition Levels on Personal Health Record in Accordance with Age and Disease Risk Factors (연령과질병위험인자 보유 여부에 따른 개인보건정보기록에 대한 인지도의 차이)

  • Son, Hyeon-S.;Rhee, Hyun-Sill
    • Proceedings of the KAIS Fall Conference
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    • 2010.11b
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    • pp.763-765
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    • 2010
  • Objectives: The aim of the research was to evaluate the recognition levels on PHR (Personal Health Record) which was regarded as a valuable tool in health areas. Old and young age groups (mostly university students) were two groups that were under investigation. The young age group was deliberately asked to pretend they were members in the old age group (adult group here after) in order to investigate the recognition level differences in such conditions. Methods: We performed common and grouping analyses based on two hypotheses. Firstly the survey results should be different in both age groups. Secondly people who had high risk factors of a disease (obesity in our study) should show higher recognition level on PHR based on an assumption that they were aware of serious outcome of the disease more than the others. Results & Conclusion: The first hypothesis was rejected as both groups show similar patterns in responding the survey. The second hypothesis was also rejected because both groups showed responses in similar patterns. Based on the outcome of our study and analyses, we concluded that there would be no differences in recognition levels on PHR between young and adult groups. Also, possession of disease risk factors, at least for obesity, would not affect the recognition level of PHR. Further elaborate researches with larger groups on the topic may be necessary in order to validate the method and to expand for various applications.

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Micro marketing using a cosmetic transaction data (화장품 고객 정보를 이용한 마이크로 마케팅)

  • Seok, Kyoung-Ha;Cho, Dae-Hyeon;Kim, Byung-Soo;Lee, Jong-Un;Paek, Seung-Hun;Jeon, Yu-Joong;Lee, Young-Bae;Kim, Jae-Gil
    • Journal of the Korean Data and Information Science Society
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    • v.21 no.3
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    • pp.535-546
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    • 2010
  • There are two methods in grouping customers for micro marketing promotion. The one is based on how much they paid and the other is based on how many times they purchased. In this study we are interested in the repurchase probability of customers. By analysing the customer's transaction data and demographic data, we develop a forecasting model of repurchase and make epurchase indexes of them. As a modeling tool we use the logistic regression model. Finally we categorize the customers into five groups in according to their repurchase indexes so that we can control customers effectively and get higher profit.

A Scenario based Framework for System Setup and Scheduling in Reconfigurable Manufacturing Systems (재구성형 유연가공라인을 위한 시나리오 기반 시스템 셋업 및 스케줄링 체계)

  • Lee, Dong-Ho;Kim, Ji-Su;Kim, Hyung-Won;Doh, Hyoung-Ho;Yu, Jae-Min;Nam, Sung-Ho
    • Journal of the Korean Society for Precision Engineering
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    • v.28 no.3
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    • pp.339-348
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    • 2011
  • Reconfigurable manufacturing system (RMS), alternatively called changeable manufacturing, is a new manufacturing paradigm designed for rapid change in hardware and software components in order to quickly adjust production capacity and functionality in response to sudden changes in market or in regulatory requirements. Although there has been much progress in hardware components during the last decade, not much work has been done on operational issues of RMS. As one of starting studies on the operational issues, we suggest a framework for the system setup and scheduling problems to cope with the reconfigurability of RMS. System setup, which includes batching, part grouping, and loading, are concerned with the pre-arrangement of parts and tools before the system begins to process, and scheduling is the problem of allocating manufacturing resources over time to perform the operations specified by system setup. The framework consists of 8 scenarios classified by three major factors: order arrival process, part selection process, and tool magazine capacity. Each of the scenarios is explained with its subproblems and their interrelationships.

Determinants of Convergence Performance in ICT Firms (ICT기업 융합성과의 결정요인에 관한 연구)

  • Lee, Moo-Soon;Son, Dal-Ho
    • The Journal of Information Systems
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    • v.26 no.3
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    • pp.1-23
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    • 2017
  • Purpose With the advent of the 4th Industrial Revolution era, ICT convergence industry is leading the wave of new change. These changes in the industrial field are recognizing convergence as a strategic cooperation tool of management for creating new value. In order to achieve the research purpose, conceptual understanding of ICT convergence is summarized by focusing on concepts, features, types and cases. In addition, this study established the theoretical rationale for the determinants of ICT convergence performance, and examined previous researches related to ICT convergence. Design/methodology/approach The empirical research method is based on a survey of 510 companies including managers and mid-level practitioners who understand the contents of the relevant field, 305 data were used for analysis. We conducted exploratory factor analysis to verify the grouping of these questionnaire items and conducted confirmatory factor analysis to analyze the validity and reliability of the measurement model. Through the statistical analysis, we analyzed the structural relationship of ICT firms' competencies for convergence performance. Findings Linkage of ICT strategies established by corporations is an important factor for enhancing resource capacity and convergence ability. It is important to ensure that product innovation, consumer-oriented strategies, and ICT strategies for the implementation of business strategies are closely linked. In addition, in the convergence environment, companies should make efforts to develop convergence ability and improve organizational performance through utilization of ICT resources. From the CEO's perspective, it is necessary to understand the knowledge, technology and resources arising from the convergence environment, and to integrate with the resources possessed by the enterprise to induce the organization's performance.