• Title/Summary/Keyword: Genus identification

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First report of the lichen Ochrolechia akagiensis (Ochrolechiaceae, Ascomycota) in Korea

  • Park, Jung Shin;Oh, Soon-Ok;Woo, Jeong-Jae;Liu, Dong;Park, Sook-Young;Hur, Jae-Seoun
    • The Korean Journal of Mycology
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    • v.47 no.2
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    • pp.95-104
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    • 2019
  • The genus Ochrolechia is a widespread, lichen genus in Korea. Despite being common, little is known about the species diversity and geographical distribution of Ochrolechia. In this study, we detailed the identification procedure of the genus Ochrolechia in a Korean collection and provided the description of each species. Using 104 specimens collected from 2003 to 2017, we identified four species of the genus Ochrolechia via morphological and/or molecular phylogenetic analysis: O. parellula, O. trochophora, O. yasudae and O. akagiensis. Among them, O. akagiensis had not been previously reported in Korea. Moreover, the species identified as O. frigida and O. tartarea in past studies were corrected as O. yasudae and O. parellula, respectively, based on morphological and/or molecular evidence. Phylogenetic analysis using the internal transcribed spacer regions including 5.8S rRNA gene showed that the four species separated clearly, indicating that the morphological identification corresponds to the phylogenetic identification. We provide a taxonomic key for the four species of the genus Ochrolechia.

First report of an aeolid nudibranch Flabellina athadona and an identification key for the genus Flabellina from Korea

  • Jung, Daewui;Park, Joong-Ki
    • The Korean Journal of Malacology
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    • v.31 no.3
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    • pp.249-252
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    • 2015
  • An aeolid nudibranch species Flabellina athadona (Bergh, 1875) is newly recorded from Korean waters. This species is distinguished from other congeneric species by the following characteristics: translucent white body, deep orange colored digestive glands, plenty of white specks, and a reversed Y-shaped marking on the head between rhinophores and oral tentacles. In this report, we also provide an identification key for the genus Flabellina in Korea, photographs, and diagnostic characteristics of F. athadona. Molecular identification using mtDNA cox1 partial sequences is also provided to help differentiate F. athadona from some of its closely related congeneric species.

A Taxonomic Study on the Burrowing Cricket Genus Velarifictorus with Morphologically Resembled Genus Lepidogryllus (Orthoptera: Gryllidae: Gryllinae) in Korea

  • Kim, Tae-Woo
    • Animal Systematics, Evolution and Diversity
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    • v.29 no.4
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    • pp.294-307
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    • 2013
  • The burrowing-cricket genus Velarifictorus Randell, 1964 is reviewed in Korea, comparing with morphologically resembled genus Lepidogryllus Otte and Alexander, 1983 for the first time. First, Velarifictorus aspersus borealis Gorochov, 1985 is confirmed from only restricted area of southern regions in Gyeongsangnam-do and Jeollanam-do. Second, Velarifictorus micado (Saussure, 1877) is confirmed from nearly all around the Korean peninsula including North Korea. Third, the previously not recorded Velarifictorus ornatus (Shiraki, 1911) is newly recognized from South Korea. Relating to the genus Velarifictorus, the resembled genus Lepidogryllus Otte and Alexander, 1983 and its species Lepidogryllus siamensis (Chopard, 1961) com. & stat. nov. is studied and compared with Velarifictorus members. A key, descriptions, tables, photographs, figures, oscillograms and spectrograms of calling sounds are provided to aid identification between the four similar species.

Wood Identification of Neolithic Charcoals Excavated at Giheung Nongseori Ruins (기흥 농서리유적에서 발굴된 신석기시대 목탄의 목재 식별)

  • Eom, Young-Geun;Xu, Guang Zhu
    • Journal of the Korean Wood Science and Technology
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    • v.38 no.4
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    • pp.275-281
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    • 2010
  • Wood identification was conducted for the 8 Neolithic charcoals excavated at Giheung Nongseori Ruins through scanning electron microscopy. They were all identified as hardwood: 6 and 1 were found to be Prinus section and Cerris section of subgenus Lepidobalanus under genus Quercus, respectively, and the remaining 1 to be genus Betula. This species composition was thought to indicate the temperate to warm temperate climate region.

Rapid Identification of Bifidobacteria in Dairy Products by Gene-targeted Species-specific PCR Technique and DGGE

  • Hong, Wei-Shung;Chen, Ming-Ju
    • Asian-Australasian Journal of Animal Sciences
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    • v.20 no.12
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    • pp.1887-1894
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    • 2007
  • In this paper, a rapid and reliable gene-targeted species-specific polymerase chain reaction (PCR) technique based on a two-step process was established to identify bifidobacteria in dairy products. The first step was the PCR assay for genus Bifidobacterium with genus specific primers followed by the second step, which identified the species level with species-specific primer mixtures. Ten specific primer pairs, designed from nucleotide sequences of the 16-23S rRNA region, were developed for the Bifidobacterium species including B. angulatum, B. animalis, B. bifidum, B. breve, B. catenulatum, B. infantis, B. longum, B. minimum, B. subtile, and B. thermophilum. This technique was applied to the identification of Bifidobacterium species isolated from 6 probiotic products, and four different Bifidobacterium spp. (B. bifidum, B. longum, B. infantis, and B. breve) were identified. The findings indicated that the 16S-23S rDNA gene-targeted species-specific PCR technique is a simple and reliable method for identification of bifidobacteria in probiotic products. PCR combined with Denaturing Gradient Gel Electrophoresis (DGGE) for identification of the bifidobacteria was also evaluated and compared with the gene-targeted species-specific technique. Results indicated that for fermented milk products consistency was found for both species-specific PCR and PCR-DGGE in detecting species. However, in some lyophilized products, the bands corresponding to these species were not visualized in the DGGE profile but the specific PCR gave a positive result.

Characterization of Bacteria and Their Antibiotic Sensitivities in Porcine Liquid Semen (돼지 액상정액 내 세균오염과 항생제 감수성에 관한 연구)

  • Ryu, Jae-Weon;Cho, Kyu-Ho;Hong, Joon-Ki;Kim, Myung-Jick;Park, Jun-Chul;Jung, Il-Byung;Kim, In-Cheul
    • Journal of Animal Science and Technology
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    • v.50 no.6
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    • pp.793-798
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    • 2008
  • The semen collection process in the porcine is far from being a sterile procedure. Consequently, porcine ejaculates commonly contain bacterial contaminants. The aim of this study is to identify the bacteria in porcine semen and to find the antibiotics resistance of bacteria. Twelve porcine originating from four AI center were used to collect semen. Bacteria were identified by automated instrument for rapid organism identification system and bacterial sensitivities of 8 antibiotics were tested. The Bacterial contaminants of Staphylococcus genus(37.8%), Proteus genus(7.0%), Bacillus genus (6.1%), Pasteulla genus(5.7%), Acinetobacte genus(5.2%), Serratia genus(4.3%) and others(33.9%) were frequently isolated. However, amikacin showed higher antibiotic sensitivity than other antibiotics. General sanitation protocols can contribute partly to inhibit the bacterial contamination, with monitoring boar housing, semen collection areas and the extended semen. But, proper selection of preservative antibiotics by microbial sensitivities can minimize the influence of bacteria.

Identification of Coliform Bacteria Isolated from Nangmyun-Broth in Korea and Psychrotrophic Character (냉면육수에서 분리한 대장균군의 동정 및 저온 증식성)

  • O, Myeong-Hwan;Kim, Mi-Yeong;Lee, Jin-Yeong
    • The Korean Journal of Food And Nutrition
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    • v.7 no.3
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    • pp.203-212
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    • 1994
  • The nangmyun is a Korean iced noodle made by putting buckwheat-noodles into cold broth. Seven samples of nangmyun-broths were collected from Korean restaurants in Bucheon during July 1994. The contamination levels of nangmyun-broths by coliform bacteria were determined, and then the 40 colonies of coliform bacteria, isolated randomly from 4 samples of nangmyun-broths, were identified at genus or species level with the additional test for psychrotrophic character The coliform counts in nangmyun-broths were 6.0x102-6.5$\times$104/ml(average 2.3$\times$104%). Among the 40 strains of isolates, 27 strains(67.5%) were identified as the genus Klebsiella, 9 strains(22.5%) as the genus Enterobacter, 2 strains(5.0%) as the genus Citrobacter and 2 strains (5.0%) as the genus Escherichia. Among 27 strains of Klebsiella, 11 strains (40.8%) were identified as K planticola, 4 strains(14.8%) as K. pneumoniae, 2 strains(7.4%) as K. ozaenae and 2 strains(7.4%) as K. terrigena, but 8 strains(29.6%) of a typic\ulcorner1 Klebgiella could not be Identified at species level. All the 40 strains of coliform bacteria were psychrotrophs showing slow growth at 1$0^{\circ}C$, and 18 strains(45%) grew at 5$^{\circ}C$. It was thought to be a good basic data In describing the reason for too high coliform counts in nangmyun-broths that all coliform bacteria tested In this study were psychrotrophs.

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New Report on Two Species of the Genus Nipponomysis (Crustacea: Mysida: Mysidae) from Korean Waters

  • Kim, Mijin;Song, Sung Joon;Kim, Won
    • Animal Systematics, Evolution and Diversity
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    • v.31 no.1
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    • pp.15-21
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    • 2015
  • Two species of mysid, Nipponomysis fusca (Ii, 1936) and N. tenuiculus (Ii, 1940), are newly recorded in Korean fauna. These two species were collected using a light or a bait trap from all coasts of the Korean peninsula. The genus Nipponomysis can be distinguished from allied genus by the following morphological characteristics: third to eighth thoracic endopods with carpopropodus divided into five to six subsegments compared to three subsegments, and anterior four pairs of pleopod in female subequal in length and fifth pair elongated. Nipponomysis fusca is characterized by its acute rostral plate and armature of telson, and N. tenuiculus differs from other species by the number of spine in ventral statocyst region and the shape of the fourth pleopod in male. Herein, we present detailed descriptions of two species from Korean waters with illustrations of morphology. In addition, an identification key to the Korean species of the genus is provided.

Prionolabis crane flies (Diptera: Limoniidae) of Korea

  • Podenas, Sigitas;Park, Sun-Jae;Byun, Hye-Woo;Aukstikalniene, Rasa
    • Journal of Species Research
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    • v.11 no.1
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    • pp.29-37
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    • 2022
  • This study is based on crane fly specimens collected more than 80 years ago in 1938-1939 and preserved at the United States National Museum, Smithsonian Institution, Washington DC, USA. Despite many attempts with a variety of methods, no additional specimens of this genus were captured. This likely means that that this genus is extinct on the Korean Peninsula, or its distribution is restricted to the northern areas of the Democratic People's Republic of Korea (North Korea). The genus Prionolabis Osten Sacken, 1860 with four species, one of them Prionolabis dis(Alexander, 1950) endemic to North Korea, was recorded by Ch. P. Alexander (Alexander, 1938, 1940, 1950). All succeeding papers listing these species were based on these original works without study based on actual specimens. For each species, we present general information on genus, redescriptions of species based on Korean specimens, illustrations of important taxonomical structures, elevation range, period of activity, habitat information, general distribution, and a distribution map for the Korean Peninsula.

A new species of the genus Ameiropsis Sars G.O., 1907 (Copepoda; Harpactiocoida) from Korea

  • Hyun Woo Bang
    • Journal of Species Research
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    • v.12 no.3
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    • pp.244-257
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    • 2023
  • The family Ameiridae Boeck, 1865 (Copepoda; Harpacticoida) consists of about 380 species in 47 genera, but only 10 species have been reported in Korea. A benthic ameirid species was collected from the East Sea of Korea. Specimens were identified as members of the genus Ameiropsis Sars G.O., 1907, and this is the first record of the genus Ameiropsis in the Pacific Ocean. Ameiropsis gyeongjuensis sp. nov. is morphologically similar to A. mixta Sars G.O., 1907 and A. longicornis Sars G.O., 1907 from Norway. However, the new species is clearly distinguishable from the others based on the following morphological characteristics: the proximal segment of antennary exopod with a bulge in the middle, and with one pinnate seta; the distal segment of antennary exopod with a thickened, blade-shaped outer seta; and female P5 baseoendopod with five setae and exopod with six setae. An identification key to species is provided for the 11 valid species of the genus Ameiropsis.