• 제목/요약/키워드: Genetic population

검색결과 2,240건 처리시간 0.028초

Genetic association of swine leukocyte antigen class II haplotypes and body weight in Microminipigs

  • Matsubara, Tatsuya;Takasu, Masaki;Imaeda, Noriaki;Nishii, Naohito;Takashima, Satoshi;Nishimura, Takashi;Nishimura, Toshiaki;Shiina, Takashi;Ando, Asako;Kitagawa, Hitoshi
    • Asian-Australasian Journal of Animal Sciences
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    • 제31권2호
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    • pp.163-166
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    • 2018
  • Objective: Microminipigs are a novel animal model with extensive applications in laboratory studies owing, in part, to their extremely small body sizes. In this study, the relationship between swine leukocyte antigen (SLA) class II haplotype and body weight was evaluated in the Microminipig population. Methods: A total of 1,900 haplotypes, covering SLA class II haplotypes Lr-0.7, Lr-0.23, Lr-0.17, Lr-0.37, Lr-0.16, Lr-0.11, Lr-0.13, and Lr-0.18, were analyzed in 950 piglets. Birth weights and weights on postnatal day 50 were examined in piglets with eight different SLA class II haplotypes. Results: The mean birth weight of piglets with the Lr-0.23 haplotype (0.415 kg, n = 702) was significantly lower than that of piglets with Lr-0.17 (0.445 kg, n = 328) and Lr-0.37 (0.438 kg, n = 383) haplotypes. At postnatal day 50, the mean body weight of piglets with the Lr-0.23 haplotype (3.14 kg) was significantly lower than that of piglets with the Lr-0.13 haplotype (3.46 kg, p<0.01). There were no significant differences in daily gains (DGs) among the eight haplotypes. However, piglets with the Lr-0.11 and -0.18 haplotype combination or any heterozygous haplotype combinations containing Lr-0.23 had significantly lower DGs than those of piglets with the Lr-0.18, 0.37 haplotype combination. Conclusion: Piglets with the Lr-0.23 haplotype had relatively low body weights at birth and on postnatal day 50 and slightly lower DGs than those of piglets with other haplotypes. Therefore, the Lr-0.23 SLA class II haplotype may be a suitable marker for the selective breeding of Microminipigs with small body sizes.

Evaluation of Chromosomal Alteration in Electrical Workers Occupationally Exposed to Low Frequency of Electro Magnetic Field (EMFs) in Coimbatore Population, India

  • Balamuralikrishnan, Balasubramanian;Balachandar, Vellingiri;Kumar, Shanmugam Suresh;Stalin, Nattan;Varsha, Prakash;Devi, Subramaniam Mohana;Arun, Meyyazhagan;Manikantan, Pappuswamy;Venkatesan, Chinnakulandhai;Sasikala, Keshavarao;Dharwadkar, Shahnaz N.
    • Asian Pacific Journal of Cancer Prevention
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    • 제13권6호
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    • pp.2961-2966
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    • 2012
  • Extremely low frequency electro magnetic fields (EMFs) have been classified as possibly carcinogenic to humans by the International Agency for Research on Cancer. An increased number of chromosomal alterations in peripheral lymphocytes are correlated with elevated incidence of cancer. The aim of the present study was to assess occupationally induced chromosomal damage in EMF workers exposed to low levels of radiation. We used conventional metaphase chromosome aberration (CA) analysis and the micronucleus (MN) assay as biological indicators of non ionizing radiation exposure. In the present study totally 70 subjects were selected including 50 exposed and 20 controls. Informed written consent was obtained from all participants and the study was performed in accordance with the Declaration of Helsinki and the approval of the local ethical committee. A higher degree of CA and MN was observed in exposed subjects compared to controls, the frequency of CA being significantly enhanced with long years of exposure (P<0.05). Moreover increase in CA and MN with age was noted in both exposed subjects and controls, but was significantly greater in the former. The results of this study demonstrated that a significant induction of cytogenetic damage in peripheral lymphocytes of workers occupationally exposed to EMFs in electric transformer and distribution stations. In conclusion, our findings suggest that EMFs possess genotoxic capability, as measured by CA and MN assays; CA analysis appeared more sensitive than other cytogenetic end-points. It can be concluded that chronic occupational exposure to EMFs may lead to an increased risk of genetic damage among electrical workers.

Single Nucleotide Polymorphisms of DNA Base-excision Repair Genes (APE1, OGG1 and XRCC1) Associated with Breast Cancer Risk in a Chinese Population

  • Luo, Hao;Li, Zheng;Qing, Yi;Zhang, Shi-Heng;Peng, Yu;Li, Qing;Wang, Dong
    • Asian Pacific Journal of Cancer Prevention
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    • 제15권3호
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    • pp.1133-1140
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    • 2014
  • Altered DNA repair capacity can result in increased susceptibility to cancer. The base excision repair (BER) pathway effectively removes DNA damage caused by ionizing radiation and reactive oxidative species (ROS). In the current study, we analyzed the possible relation of polymorphisms in BER genes, including 8-oxoguanine DNA glycosylase (OGG1), apurinic/apyrimidinic endonuclease 1 (APE1), and X-ray repair cross-complementing group 1 protein (XRCC1), with breast cancer risk in Chinese Han women. This case-control study examined 194 patients with breast cancer and 245 cancer-free hospitalized control subjects. Single nucleotide polymorphisms (SNPs) of OGG1 (Ser326Cys), XRCC1 (Arg399Gln), and APE1 (Asp148Glu and -141T/G) were genotyped and analyzed for their association with breast cancer risk using multivariate logistic regression models. We found that XRCC1 Arg399Gln was significantly associated with an increased risk of breast cancer. Similarly, the XRCC1 Gln allele was significantly associated with an elevated risk in postmenopausal women and women with a high BMI (${\geq}24kg/m^2$). The OGG1 Cys allele provided a significant protective effect against developing cancer in women with a low BMI (< $24kg/m^2$). When analyzing the combined effects of these alleles on the risk of breast cancer, we found that individuals with ${\geq}2$ adverse genotypes (XRCC1 399Gln, APE1 148Asp, and OGG1 326Ser) were at a 2.18-fold increased risk of breast cancer (P = 0.027). In conclusion, our data indicate that Chinese women with the 399Gln allele of XRCC1 have an increased risk of breast cancer, and the combined effects of polymorphisms of BER genes may contribute to tumorigenesis.

황해산 대하(Penaeus chinensis)의 계군분석을 위한 미토콘드리아 DNA 분석 (Mitochondrial DNA Analysis of the Fleshy Prawn (Penaeus chinensis) for Stock Discrimination in the Yellow Sea)

  • 황규린;이영철;장정순
    • 한국수산과학회지
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    • 제30권1호
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    • pp.88-94
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    • 1997
  • 황해 서식 대하(P. chinenesis) 각 개체군의 유전 구조를 파악하기 위하여 미토콘드리아 DNA(mtDNA)를 추출한 후 BamHI등 15종의 제한효소를 이용한 제한효소 절편 다형 현상 (Restriction Fragment Length Polymer-phisms; RFLPs)을 분석하였으며 보리새우 (P. japonicus)와의 염기 치환 정도를 비교하기 위하여 일본 나가사키 1 집단의 절편 양상도 함께 분석하였다. 한국의 대천, 진도, 나로도 집단과 중국의 발해, 청도 집단 등 5개 집단을 분석한 결과, 대하에서는 3종의 haplotype이 발견되었으나 5개 집단 모두가 하나의 haplotype에 의해 지배되고 있는 것으로 나타났다. 나타난 변이는 2종류로 Cla I과 Pvu II 인식부위가 부가된 변이가 청도와 나로도 집단에서 출현하였을 뿐 전 집단에 대한 나머지 13종의 제한 효소 절편 양상은 모두 동일한 것으로 나타났다. 이와 같은 결과에서 보면 황해산 대하의 각 집단 사이에는 활발한 유전자 교류가 있는 것으로 판단되며, 3개 계군에 대한 지금까지의 구분은 재검토되어야 할 것으로 판단된다. 대하와 보리새우의 mtDNA 공통절편을 이용한 p 값에 의한 염기치환은 $13.7\%$ 정도인 것으로 나타났으며, 제한 효소별 절편의 크기를 비교한 결과 대하의 mtDNA의 크기는 평균 16.44kb였고 보리새우는 약 16.31kb였다.

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Association of Leptin Receptor Lys109Arg and Gln223Arg Polymorphisms with Increased Risk of Clear Cell Renal Cell Carcinoma

  • Mu, Hui-Jun;Zou, Jian;Xie, Ping;Xu, Zhuo-Qun;Ruan, Jun;Yang, Shu-Dong;Yin, Ying
    • Asian Pacific Journal of Cancer Prevention
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    • 제15권10호
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    • pp.4211-4215
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    • 2014
  • Background: Although roles of genetic polymorphisms of leptin receptor (LEPR) gene in several cancers have been documented, the association between polymorphisms of LEPR and clear cell renal cell carcinoma (CC-RCC) remains unknown. The aim of this study was to explore any relation. Materials and Methods: The study population consisted of 77 patients with CC-RCC and 161 healthy control subjects. Polymorphism analyses of Lys109Arg and Gln223Arg were performed by direct DNA sequencing and PCR-restriction fragment length polymorphism approaches respectively. Results: Comparisons of allelic and genotypic frequencies in Lys109Arg and Gln223Arg showed no significant difference between the cases and controls. However, when evaluating the combined genotype of Lys109Arg and Gln223Arg, risk with GG/GG was increased (OR=1.85, 95%CI=1.04-3.30) and with GA/GG or GG/GA was decreased (OR=0.07, 95%CI=0.01-0.54; OR and 95%CI of the latter could not be calculated for a value of zero). Furthermore, the G-G haplotype frequency of Lys109Arg and Gln223Arg in the cases was higher (OR=1.68; 95%CI=1.02-2.76). In contrast, the A-G and G-A haplotype frequencies in the cases were lower than those in the controls (OR=0.06; 95%CI=0.01 to 0.47; OR and 95%CI of the latter could not be calculated for a value of zero). In addition, the Lys109Arg A allele was in LD with the Gln223Arg A allele (d'=0.9399) in the CC-RCC subjects, but not in the controls. Conclusions: Our data suggest that the GG/GG combined genotype and G-G haplotype of Lys109Arg and Gln223Arg can act as evaluating factors for CC-RCC risk.

Gene Polymorphism of XRCC1 Arg399Gln and Cervical Carcinoma Susceptibility in Asians: A Meta-analysis Based on 1,759 Cases and 2,497 Controls

  • Liu, Yi-Ting;Shi, Jing-Pu;Fu, Ling-Yu;Zhou, Bo;Wang, Hai-Long;Wu, Xiao-Mei
    • Asian Pacific Journal of Cancer Prevention
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    • 제14권1호
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    • pp.189-193
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    • 2013
  • Many epidemiological studies in Asian populations have investigated associations between the Arg399Gln gene polymorphism of X-ray repair cross complementing gene 1 (XRCC1) and risk of cervical carcinoma, but no conclusions have been available because of controversial results. Therefore a meta-analysis was conducted for clarification. Relevant studies were identified by searching the Pubmed, Embase, the Web of Science, Cochrane Collaboration's database, Chinese National Knowledge Infrastructure (CNKI), Wanfang database and China Biological Medicinse (CBM) until September, 2012. A total of eight studies were included in the present meta-analysis, which described 1,759 cervical carcinoma cases and 2,497 controls. Odds ratios (ORs) and corresponding 95% confidence intervals (95%CIs) as effect size were calculated by fixed-effect or random-effect models. The overall results indicated that the XRCC1-399G/A polymorphism was marginally associated with cervical carcinoma in Asians: OR (95%CI): 1.16 (1.07, 1.26) in the G/A vs G/G inheritance model, 1.24 (0.87, 1.76)in A/A vs G/G inheritance model, 1.13 (1.01, 1.27) in the dominant inheritance model and 1.18 (0.94, 1.47) in the recessive inheritance model. Subgroup analyses on sample size showed no significant correlation in the small-sample size group but the large-sample size group was consistent with the outcomes of overall meta-analysis. In the subgroup analysis by regions, we only found significant association under the G/A vs G/G inheritance model in the Chinese population. For the non-Chinese populations, no correlation was detected in any genetic inheritance model. In the Asian populations, XRCC1-399G/A gene polymorphism was implied to be associated with cervical carcinoma.

성페로몬과 RAPD 분자지표를 이용한 사과 재배지 복숭아순나방(Grapholita molesta)발생 모니터링과 집단 이동 분석 (Analysis of Migration of the Oriental Fruit Moth, Grapholita molesta, in Apple-Cultivating Areas Based on Population Monitoring Using Sex Pheromone and RAPD Molecular Marker)

  • 김용균;배성우;손예림;박정아
    • 한국응용곤충학회지
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    • 제48권2호
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    • pp.211-219
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    • 2009
  • 사과원에 발생하는 복숭아순나방(Grapholita molesta)의 지역 및 계절적 집단 변동 상황을 성페로몬 트랩과 RAPD (random amplified polymorphic DNA) 분자마커를 이용하여 분석하였다. 사과 재배지에서 과원들 간에 이 해충의 이동을 검출하기 위해 페로몬 트랩을 사과원 내부와 이들 사과원 사이 지역에 설치하였다. 사과원 안팎에서 조사된 성페로몬 모니터링 결과는 모두 복숭아순나방의 연중(4월${\sim}$10월) 4회 성충 발생 피크를 나타냈다. 월동세대 이후 모니터링 결과를 살펴보면 사과원 외부에 비해 사과원 내부 성충 발생은 빈번한 살충제 처리에 따라 현격하게 줄었다. 사과원 내부에서 복숭아순나방은 국부적 선호성에 따른 불균등한 발생 분포를 나타냈다. RAPD 분자지표를 이용한 유전분석이 이러한 복숭아순나방의 지역 및 계절적 이동을 뒷받침하였다. 본 연구는 성페로몬을 이용한 인근 과수원 안팎의 모니터링 자료와 계절의 진행됨에 따라 집단간 유전적 분화가 감소하는 결과를 통해 사과재배지 과원들 사이에 복숭아순나방의 이동이 가능하다는 것을 제시하고 있다.

수도(水稻) 백엽고병(白葉枯病)의 저항성(抵抗性) 유전(遺傳)에 관(關)한 연구(硏究) (Studies on the Inheritance of Resistance to Bacterial Leaf Blight of Rice Varieties)

  • 최재을
    • 농업과학연구
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    • 제4권2호
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    • pp.191-198
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    • 1977
  • 수도(水稻) 고병유전(枯病遺傳) 양식(樣式)과 백엽고병(白葉枯病) 저항성(抵抗性)과 출수기(出穗期)와의 관계(關係)를 구명(究明)하기 위(爲)하여 본병(本病)에 이병성(罹病性)인 TN1, IR 24를 모본(母本)으로 하고 저항성(抵抗性)인 IR 1545-339-2, IR 1544-340, IR 1698-237-2, 62-595, Kele를 부본(父本)으로 한 조합(組合)과 이병성(罹病性)인 Yushin, Milyang 23을 모본(母本)으로 하고 IR 1529-680-3, IR 28, IR 29, RP 663-337-7-8-4-1-1, RP 291-20을 부본(父本)으로 한 교배조합(交配組合)의 $F_1$$F_2$에 백엽고병균계(白葉枯病菌系) 71-23, 76-1을 접종(接種)하여 다음과 같은 결과(結果)를 얻었다. 1. IR 1529-680-3, IR 28, IR 29, RP 663-337-7-8-1-1, RP 291-20, 62-595가 71-23 균계(菌系)에 의(依)한 저항성(抵抗性)은 단순우성유전자(單純優性遺傳子)에 의(依)해 교배(交配)되었다. 2. IR 1545-339-2, IR 1544-340, IR 1698-237-2 Kele가 71-23 균계(菌系)에 의(依)한 저항성(抵抗性)은 단순(單純) 열성(劣性) 유전자(遺傳子)에 의(依)해 지배(支配)되었다. 3. IR 1545-339-2, IR 1544-340, IR 1698-237-2가 76-1 균계(菌系)에 의(依)한 저항성(抵抗性)은 단순우성유전자(單純優性遺傳子)에 의(依)해 지배(支配)되었다. 4. 동일(同一) 저항성(抵抗性) 품종(品種)도 사용(使用)하는 균계(菌系)에 따라 유전양식(遺傳樣式)과 저항성(抵抗性) 품종(品種)도 사용(使用)하는 균계(菌系)에 따라 유전양식(遺傳樣式)과 저항성(抵抗性) 정도(程度)에 차이(差異)가 있었다. 5. 백엽고병(白葉枯病) 저항성(抵抗性)과 출수기(出穗期)와의 사이에는 아무런 관련성(關聯性)도 없었다.

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PLCE1 rs2274223 Polymorphism and Susceptibility to Esophageal Cancer: a Meta-analysis

  • Guo, Li-Yan;Yang, Ning;Hu, Die;Zhao, Xia;Feng, Bing;Zhang, Yan;Zhai, Min
    • Asian Pacific Journal of Cancer Prevention
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    • 제15권21호
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    • pp.9107-9112
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    • 2014
  • Purpose: To investigate and study the relationship between the PLCE1 rs2274223 gene polymorphism and susceptibility to esophageal cancer by meta-analysis. Materials and Methods: The literature was searched in Wanfang, CNKI, PubMed, CBM, Web of Science, MEDLINE, EMBASE, Springer, Elsevier and Cochrane databases from the date of January $1^{st}$ 2004 to April $1^{st}$ 2014 to collect case-control studies on the PLCE1 polymorphism and susceptibility to esophageal cancer. For the population genotype distributions of both esophagus cancer and control groups, their odds ratios (ORs) and 95% confidence intervals (CIs) were taken as effect indexes. Disqualified studies were excluded. Odds ratios of PLCE1 rs2274223 genotype distributions in the group of patients with esophageal cancer and the group of healthy control were calculated. The metaanalysis software, RevMan5.0, was applied for heterogeneity test, pooled OR and 95% confidence intervals. Sensitivity analysis and publication bias were also explored. Results: A total of twelve case-control studies were included, covering a total of 9, 912 esophageal cancer cases and 13, 023 controls were included. The pooled odds ratio of PLCE1 rs2274223 genotype GA vs AA was 1.29 (95%CI=1.17~1.43), p<0.01, GG vs AA was 1.65 (95%CI=1.32~2.05), p<0.01, GG/GA vs AA was 1.30 (95%CI=1.16~1.46), p<0.01 and GG vs GA/AA was 1.48 (95%CI=1.22~1.80), p<0.01. The PLCE1 rs2274223 polymorphism was thus associated with risk of esophageal cancer in all genetic models. In the stratified analysis by ethnicity, and source of controls, no significantly increased risk was observed for white persons. There was no obvious publication bias detected. Conclusions: This meta-analysis showed there was a significantly association between PLCE1 rs2274223 polymorphism and esophageal cancer in yellow race populations. Due to some minor limitations, our findings should be confirmed in further studies.

부분 무치증 환아의 증례보고 (OLIGODONTIA : CASE REPORT)

  • 손정민;최남기;김선미;양규호
    • 대한소아치과학회지
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    • 제34권4호
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    • pp.658-665
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    • 2007
  • 부분 무치증은 제 3대구치를 제외한 6개 이상의 선천적 치아 결손으로 정의된다. 제3대구치를 제외한 선천적 치아 결손의 유병율은 $1.6{\sim}9.6%$이며 부분 무치증의 유병율은 $0.08{\sim}1.1%$이다. 가장 많이 이환되는 치아는 하악 제 2소구치이며 그 다음은 상악 측절치, 상악 제2소구치 순으로 호발하며 영구치에 비해 유치에서는 드물고 여성에게 호발하는 경향이 있다. 부분 무치증은 외배엽 이형성증과 같은 특정 증후군과 연관되거나 치판의 생리적인 장애나 파열, 공간적 제한, 치성상피의 기능적인 비정상, 기저 간엽세포의 유도 실패나 유전적 영향 등의 원인에서 유래된다고 알려져 있다. 부분 무치증은 안모의 심미적 문제와 함께 치아의 교합 이상 등 기능적인 장애가 야기될 수 있으므로 임상 검사와 방사선 검사를 통한 조기 진단이 필요하며, 이에 따른 적절한 치료계획이 요구된다. 이에 본 증례에서는 특별한 전신질환이 없는 부분 무치증 환아의 구강내 소견 및치료경과에 대해 보고하고자 한다.

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