• Title/Summary/Keyword: Genetic Origin

Search Result 333, Processing Time 0.029 seconds

Intronic Sequences for the Discrimination of Silkworm Strains in Silkworm Powder

  • Kim, Kee-Young;Lee, Eun-Mee;Hong, Mee-Yeon;Kang, Pil-Don;Ryu, Kang-Sun;Kim, Ik-Soo
    • International Journal of Industrial Entomology and Biomaterials
    • /
    • v.15 no.2
    • /
    • pp.93-100
    • /
    • 2007
  • After a serial study on the therapeutic efficacy of the powdery silkworm for diabetics was positively resulted in, many powdery silkworm products were on the market in Korea. Up to now, however, no causal method is available to discriminate the strain of silkworms that is a major ingredient for manufacturing powdery silkworm, even though the quality of the powdery silkworm differs greatly by source and origin of strains. We previously were successful in identifying 25 silkworm strains kept in Korea using nine intronic sequences. In this study, we tested the utility of the nine intronic sequences to distinguish the most widely reared silkworm strains originated from Korea and China. Two intron regions, PTTH Intron3 and PTTH Intron3, showed a substantial sequence divergence (mean sequence divergence of 3.13% in PTTH Intron3 and 4.99% in PTTH Intron3). These two intronic sequences provided no identical sequences among the seven strains tested. Thus, these sequences each along can be used to discriminate the seven strains tested in this study. Furthermore, other intron regions, except for VDP Intron4 allowed us to discriminate $2{\sim}4$ strains by strain-specific unique insertion/deletion or substitution.

Review on the Correlation between Bone Mass, Skinfold Thickness and the Volume of Urine collagen Peptide in Postmenopausal Women (폐경 후 여성의 골량과 피부두겹두께 및 뇨 콜라겐펩타이드 양의 관련성에 대한 고찰)

  • Park, Mi-Jung
    • Journal of Korean Biological Nursing Science
    • /
    • v.3 no.2
    • /
    • pp.91-103
    • /
    • 2001
  • The bone is composed of the bone matrix of collagen and hydroxyapatite, the mixture of calcium and phosphours. The bone tissue is considered to the special connective tissue that possesses extracellular matrix made by collagen fiber deposited with mineral complex. In order to maintain bone mass measured by the sum of bone matrix and hydroxyapatite, bone resorption by osteoclast during lifetime and bone remodeling to form bone by osteoblast in its resorption region repeat continuously. The osteoblast has a mesodermic fetal origin like fibroblast for the formation of form tissues. Two cells express identical genes and synthesize the identical collagen type I as the major component of the formation of bone matrix and skin. Therefore, it is considered that the decrease of skinfold thickness and the decrease of bone mass related to the age, the change of two tissues composed of collagen type I is caused by the same genetic mechanism. The decrease of bone mass is caused by the change of the amount and structure of bone matrix by several factors and the amount of minerals deposited on bone matrix. Especially, in case of female, the deficiency of estrogen by menopause makes these changes rapidly increased. The decrease of bone mass and skinfold thickness is due to the decrease of the amount of collagen and its structural change the common component of bone tissue and skin tissue. Therefore, the relationship of the amount of cross-linked peptide N-telopeptide, collagen metabolite which excretes as urine. Based upon the proved results about the significant relationship of bone mass, the amount of bone collagen, the amount of skin collagen and skinfold thickness, the bone mass may be expected through a facile determination of skinfold thickness.

  • PDF

Isolation of Mouse Ig Heavy and Light Chain Genomic DNA Clones, and Construction of Gene Knockout Vector for the Generation of Humanized Xenomouse (인간 단클론 항체 생산용 Humanized Xenomouse 제작의 기초 소재인 생쥐 Ig 중사슬 및 경사슬 Genomic DNA 클론의 확보 및 유전자 적중 벡터의 제작)

  • Lee, Hee-kyung;Cha, Sang-hoon
    • IMMUNE NETWORK
    • /
    • v.2 no.4
    • /
    • pp.233-241
    • /
    • 2002
  • Background: Monoclonal antibodies (mAb) of rodent origin are produced with ease by hybridoma fusion technique, and have been successfully used as therapeutic reagents for humans after humanization by genetic engineering. However, utilization of these antibodies for therapeutic purpose has been limited by the fact that they act as immunogens in human body causing undesired side effects. So far, there have been several attempts to produce human mAbs for effective in vivo diagnostic or therapeutic reagents including the use of humanized xenomouse that is generated by mating knockout mice which lost Ig heavy and light chain genes by homologous recombination and transgenic mice having both human Ig heavy and light gene loci in their genome. Methods: Genomic DNA fragments of mouse Ig heavy and light chain were obtained from a mouse brain ${\lambda}$ genomic library by PCR screening and cloned into a targeting vector with ultimate goal of generating Ig knockout mouse. Results: Through PCR screening of the genomic library, three heavy chain and three light chain Ig gene fragments were identified, and restriction map of one of the heavy chain gene fragments was determined. Then heavy chain Ig gene fragments were subcloned into a targeting vector. The resulting construct was introduced into embryonic stem cells. Antibiotic selection of transfected cells is under the progress. Conclusion: Generation of xenomouse is particularly important in medical biotechnology. However, this goal is not easily achieved due to the technical difficulties as well as huge financial expenses. Although we are in the early stage of a long-term project, our results, at least, partially contribute the successful generation of humanized xenomouse in Korea.

Prenatal diagnosis of interchromosomal insertion of Y chromosome heterochromatin in a family

  • Lee, Bom-Yi;Park, Ju-Yeon;Lee, Yeon-Woo;Oh, Ah-Rum;Lee, Shin-Young;Park, So-Yeon;Ryu, Hyun-Mee;Lee, Si-Won
    • Journal of Genetic Medicine
    • /
    • v.14 no.2
    • /
    • pp.62-66
    • /
    • 2017
  • Interchromosomal insertion of Y chromosome heterochromatin in an autosome was identified in a fetus and a family. A fetal karyotype was analyzed as 46,XX,dup(7)(?q22q21.1) in a referred amniocentesis at 16 weeks of gestation for advanced maternal age. In the familial karyotype analyses for identification of der(7), the mother, the first daughter and the maternal grandmother showed the same der(7) as the fetus's. CBG-banding was positive at 7q22 region of der(7) that indicated inserted material was originated from heterochromatin. The origin of heterochromatic insertion region in der(7) of the fetus and the mother was found in Yq12 region by fluorescent in situ hybridization with a DYZ1 probe. In the specific analysis of Y chromosomal heterochromatic region of ins(7;Y) of the mother, 15 sequence tagged sites from Yp11.3 region including SRY to Yq11.223 region was not detected. Final karyotypes of the mother, the first daughter and the maternal grandmother were reported as 46,XX,der(7)ins(7;Y)(q21.3;q12q12). All female carriers of ins(7;Y) in the family showed normal phenotype and the mother and the maternal grandmother were fertile. A healthy girl was born at term. We report a rare case of familial interchromosomal insertion of Y chromosome heterochromatin detected only in female family members with normal phenotype that was diagnosed prenatally.

A Review of the Jindo, Korean Native Dog - Review -

  • Lee, C.G.;Lee, J.I.;Lee, C.Y.;Sun, S.S.
    • Asian-Australasian Journal of Animal Sciences
    • /
    • v.13 no.3
    • /
    • pp.381-389
    • /
    • 2000
  • The Jindo is a Korean native dog, well-known for its hunting and guarding abilities. When he gives his devotion to one individual, he gives it whole-heartedly. He is not tempted easily and impetuous. The breed was not developed. but the dog retained their original qualities -loyal, alert, fearless, obedient, watchful, intelligent, energetic- to survive in the harsh environment of the Jindo island. The dog had been spread over the entire Korean peninsula from the time unknown, and the ones in the Jindo island, isolated until lately, survived and maintained their original characteristics. They are now spread over the entire Jindo County consisted of many islands, whence the breed name came. The Jindo comes in a variety of colors and color combinations, with the fawn and white colorings predominant. The dog is one of the Korean natural monuments, protected by law since early 1960s. The Jindo gained official approval by the Federation Cynologique Internationale as a hunting dog. Apart from the basic housetraining, the dog rarely gets training. Many people have attempted to preserve its pure bloodlines and original qualities. Today, there are a total of 10,356 Jindoes being raised over the entire Jindo County, and many more are kept elsewhere. A research into genetic characteristics of the Jindo is now going on, using the technique of isozyme electrophoresis. The Jindo Dog Breeding Management Center has been reinforced lately, and in addition to their routines, the Center is to work on the breeding of the Jindo. Efforts should be made in the future to produce stable, trustworthy Jindoes according to their proposed use and to modify their temperament in order to make it more widely acceptable as a pet and companion dog in the strangers home.

Distribution of EGFR Mutations Commonly Observed in Primary Lung Adenocarcinomas in Pakistan as Predictors for Targeted Therapy

  • Ahmed, Zeeshan Ansar;Moatter, Tariq;Siddiqui, Areeba;Pervez, Shahid
    • Asian Pacific Journal of Cancer Prevention
    • /
    • v.15 no.17
    • /
    • pp.7125-7128
    • /
    • 2014
  • Background: Acquired genetic alterations and presence of sensitizing mutations in the tyrosine kinase domain of EGFR and other signaling molecules have been found in different subsets of primary lung adenocarcinoma. The commonest EGFR mutations are small in frame deletions of exon 19 and a point mutation (L858R) in exon 21, having a combined occurrence of around 90%. The objective of this study was to determine the frequency and types of EGFR mutations in primary lung adenocarcinomas in Pakistan. Materials and Methods: EGFR mutations in tumor samples were screened by multiplex real time PCR. Briefly, DNA from formalin fixed paraffin-embedded tissue was amplified with primers and probes specific to 43 different EGFR mutations in a Cobas z 480 instrument. The assay detects mutations in four exons (18-21) of the EGFR gene. Results: Out of 94 patients, 65 were males and 29 females with a M:F ratio of 2.2: 1. The median age was 62 years (range, 28 - 85 years). In our biopsy samples 70 (74%) cases were of primary lung adenocarcinoma, whereas 24 (26%) were confirmed metastatic adenocarcinoma of primary lung origin. EGFR mutation was positive in 29% of the patients. The highest frequency of L858R was observed in 48% of these, followed by deletion in exon 19 (44%). In addition, other rare mutations such as compound G718X:S768I and insertions in exon 20 insertion were detected in approximately 4% of the patients. Conclusions: This study showed that Del 19 and L858R are the most frequent mutations in Pakistani lung adenocarcinoma patients and around 29% of the patients were found eligible for erlotinib therapy.

Characterization of Tetracycline-Resistant Genes of Staphylococci isolates from Human and Marine Environment (사람과 해양환경에서 분리된 Staphylococci의 Tetracycline 내성 유전자의 특성 비교)

  • CHO, Ki-Taek;KIM, Young-Chul;KWON, Woo-Ju;JEONG, Hyun-Do
    • Journal of Fisheries and Marine Sciences Education
    • /
    • v.28 no.1
    • /
    • pp.59-68
    • /
    • 2016
  • For comparison of tetracycline-resistant ($Tc^R$) genes, we obtained 21 and 14 $Tc^R$ Staphylococcus spp. from marine environment and human patient, respectively. Although all isolates from human were identified as Staphylococcus aureus, higher proportion of $Tc^R$ isolates (12 out of 14) from human were utilizing tet(M) gene compared to that of $Tc^R$ isolates (6 out of 21) from marine environment. Additionally, collaborated utilization of tet(M) and erm(A) in $Tc^R-Em^R$ S. aureus in human patient, but not in $Tc^R$ Staphylococcus spp. isolates from marine environment was also characterized. Based on the nucleotide sequence of transposon related to $Tc^R$ gene, we confirmed the origin of tet(M) gene in $Tc^R$ Staphylococci isolated from marine environments and human are derived from Tn916/1545-like and Tn5801 transposon, respectively. It is the first report showing the presence of Tn5801 in all $Tc^R$ S. aureus carrying tet(M) in human patient. Alignment of the fully sequenced tet(M) from marine environmental isolates was also agreed with the determined transposons by showing the genomic mosaic structure composed with three genomic parts from Tn916/1545 and unknown transposons. Genetic characteristics of these tet(M) in environmental isolates were similar to each other but different from those in isolates from human showing only tet(M) from Tn916/5801 type. It may imply the presence of less dramatic communication of antibiotic resistant genes between Staphylococci isolated from marine environment and human.

Petrology of the Igneous Rocks in the Goseong Area, Gyeongsang Basin I. Major Element Geochemistry and K-Ar Radiometric Age (경상분지 고성지역의 화성암류에 대한 암석학적 연구 I. 주성분원소 지구화학과 K-Ar 방사성 연대)

  • Jwa, Yong-Joo;Park, Jeong-mi
    • Economic and Environmental Geology
    • /
    • v.29 no.5
    • /
    • pp.561-573
    • /
    • 1996
  • The igneous rocks in the Goseong area, the southwestern part of the Gyeongsang basin, are composed of the volcanic rocks, Bulgugsa granites and intrusive andesites. The volcanic rocks are andesitic lapilli tuff, dacite and rhyolite. The granites are mainly of hornblende-biotite granite and intruded into the sedimentary basement and the volcanic rocks. The intrusion of andesitic dyke is thought to be the latest igneous activity in the area. In the variation diagrams of the major oxides, the three igneous rock types show different variational trends, indicating that they were from the different magmatic pulses. K-Ar radiometric ages suggest that the igneous activity in the Goseong area had occurred during late Cretaceous period. The ages of the volcanic rocks seem likely to have become younger due to the thermal effect by the granitic intrusion. The major element compositoinal variation of the granites from the Goseong area are compared with those from the Jindong, Geoje and Masan areas. By the comparison, it is easily understood that the Jindong granites are fairly different from the other three granites. On the other hand, the Goseong, Geoje and Masan granites generally show similar variational trends with each other, suggesting that they are of similar genetic origin. Combining the similarity of the geochemical features and the difference of the intruding ages between the Goseong and Masan granites, it seems like that the magma generation from the same source materials had occurred at a temporal interval.

  • PDF

Public Transport Network Connectivity using GIS-based Space Syntax (GIS 기반 Space Syntax를 이용한 대중교통 접근성)

  • Jun, Chul-Min
    • Journal of Korea Spatial Information System Society
    • /
    • v.9 no.3
    • /
    • pp.25-33
    • /
    • 2007
  • The local governments of major cities in Korea are giving focus on public transportation to reduce congestion and improve accessibility in city areas. In this regards, the proper measurement of accessibility is now a key policy requirement for reorganizing the public transport network. Public transport routing problems, however, are considered to be highly complicated since a multi-mode travel generates different combinations of accessibility. While most of the previous research efforts on measuring transport accessibility are found at zone-levels, an alternative approach at a finer scale such as bus links and stops is presented in this study. We proposes a method to compute the optimal route choice of origin-destination pairs and measure the accessibility of the chosen modes combination based on topological configuration. The genetic algorithm is used for the computation of the journey paths, whereas the space syntax theory is used for the accessibility. This study used node-link data in GIS instead of axial lines which are manually drawn in space syntax. The resulting accessibilities of bus stops are calibrated by O-D survey data and the proposed process is tested on a CBD of Seoul.

  • PDF

Genetic properties of R plasmids in Salmonella isolates of swine and bovine origin in Korea I. Distribution and drug resistance of Salmonella isolated from dairy cow (우(牛), 돈(豚)에서 분리(分離)한 Salmonella유래(由來) R plasmid의 유전학적(遺傳學的) 및 분자생물학적(分子生物學的) 성상(性狀)에 관한 연구(硏究) I. 유우(乳牛)에서 Salmonella속균(屬菌)의 분포상황(分布狀況) 및 약제내성(藥劑耐性))

  • Choi, Won-pil;Lee, Hi-suk;Yeo, San-geon;Lee, Hun-jun;Chae, Tae-chul
    • Korean Journal of Veterinary Research
    • /
    • v.28 no.2
    • /
    • pp.331-337
    • /
    • 1988
  • This paper dealt with the distribution of Salmonella (S) infection on 4 herds in Kyungju and Taegu during the period from May to October 1986. Isolated Salmonella were examined for serotypes, antimicrobial drug resistance and detection of R plasmid. The results obtained were summarised as followings: 1. Of total 4.622 samples from 4 herds, 67 Salmonella were isolated from 51 samples(1.1%), and their serovar strains were S typhimurium 6, S derby 5, S infantis 4, S bareilly 4, S dublin 3, S anatum 2, S montevideo 2 and untypable 41. 2. The isolation rate of Salmonella was higher in summer and autumn. 3. Of the 67 strains examined, 45 (67.2%) were resistant to one or more antibiotics, such as ampicillin (Am), cephalothin (Ce), chloramphenicol (Cm), rifampicin (Rf), sulfadimethoxine (Su), and tetracycline (Tc), and higher resistant to Sm (40.2%), Ce (31.3%), Am (23.9%). 4. Of the 45 resistant Salmonella strains, 44 (97.8%) harbored conjugative R plasmids and the transfer frequency of Sm (100%), Ce (95.2%), Tc (91.0%) and Su (80.0%) resistance was much higher than that of the other drug resistance. 5. The most common resistant patterns were Sm, Ce, AmCeCmSmSuTc, and AmCe. 6. In 4 herds, the incidience of drug resistance was 57.7%~100% and transfer frequency of conjugative R plasmid was 96.1%~100%.

  • PDF