• Title/Summary/Keyword: Genetic Factors

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Conservation Biology of Endangered Plant Species in the National Parks of Korea with Special Reference to Iris dichotoma Pall. (Iridaceae)

  • So, Soonku;Myeong, Hyeon-Ho;Kim, Tae Geun;Oh, Jang-Geun;Kim, Ji-young;Choi, Dae-hoon;Yun, Ju-Ung;Kim, Byung-Bu
    • Proceedings of the Plant Resources Society of Korea Conference
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    • 2019.10a
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    • pp.32-32
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    • 2019
  • The aim of this study was to provide basic guidelines for conservation and management of endangered plants in the national parks of Korea. Iris dichotoma Pall. (Iridaceae), which is a popular garden plant, is considered a second-class endangered species by Korean government and it is listed as a EN (Endangered) species in Red Data Book of Korea. We analyzed ecological conditions of I. dichotoma habitats based on vegetation properties and soil characteristics. This species which is known to inhabit in grassland adjacent to the ocean of lowlands slope and its population was located at an elevation of 8 m to 11 m. In the study sites, the mean of soil organic matter, total nitrogen and soil pH were 6.16%, 0.234% and 5.39 respectively. Additionally, the genetic variation and structure of three populations were assessed using ISSR (Inter Simple Sequence Repeat) markers. The genetic diversity of I. dichotoma (P = 59.46%, H = 0.206, S = 0.310) at the species level was relatively high. Analysis of molecular variance (AMOVA) showed 82.1% of the total genetic diversity was occurred in within populations and 17.9% variation among populations. Lastly, we developed predicted distribution model based on climate and topographic factors by applying SDMs (Species Distribution Models). Consequently, current status of I. dichotoma habitats is limited with natural factors such as the increase of the coverage rate of the herbs due to ecological succession. Therefore, it is essential to establish in situ and ex situ conservation strategies for protecting natural habitats and to require exploring potential and alternative habitats for reintroduction.

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Etiopathogenesis of sacroiliitis: implications for assessment and management

  • Baronio, Manuela;Sadia, Hajra;Paolacci, Stefano;Prestamburgo, Domenico;Miotti, Danilo;Guardamagna, Vittorio A.;Natalini, Giuseppe;Bertelli, Matteo
    • The Korean Journal of Pain
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    • v.33 no.4
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    • pp.294-304
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    • 2020
  • The sacroiliac joints connect the base of the sacrum to the ilium. When inflamed, they are suspected to cause low back pain. Inflammation of the sacroiliac joints is called sacroiliitis. The severity of the pain varies and depends on the degree of inflammation. Sacroiliitis is a hallmark of seronegative spondyloarthropathies. The presence or absence of chronic sacroiliitis is an important clue in the diagnosis of low back pain. This article aims to provide a concise overview of the anatomy, physiology, and molecular biology of sacroiliitis to aid clinicians in the assessment and management of sacroiliitis. For this narrative review, we evaluated articles in English published before August 2019 in PubMed. Then, we selected articles related to the painful manifestations of the sacroiliac joint. From the retrieved articles, we found that chronic sacroiliitis may be caused by various forms of spondyloarthritis, such as ankylosing spondyloarthritis. Sacroiliitis can also be associated with inflammatory bowel disease, Crohn's disease, gout, tuberculosis, brucellosis, and osteoarthritis, indicating common underlying etiological factors. The pathophysiology of sacroiliitis is complex and may involve internal, environmental, immunological, and genetic factors. Finally, genetic factors may also play a central role in progression of the disease. Knowing the genetic pre-disposition for sacroiliitis can be useful for diagnosis and for formulating treatment regimens, and may lead to a substantial reduction in disease severity and duration and to improved patient performance.

Dopamine Receptor Gene (DRD1-DRD5) Expression Changes as Stress Factors Associated with Breast Cancer

  • Pornour, Majid;Ahangari, Ghasem;Hejazi, Seyed Hesam;Ahmadkhaniha, Hamid Reza;Akbari, Mohamad Esmail
    • Asian Pacific Journal of Cancer Prevention
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    • v.15 no.23
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    • pp.10339-10343
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    • 2015
  • Breast cancer is the most common cancer among females worldwide and a most prevalent malignancy in Iranian women. Chronic stress may make an important contribution to cancer, especially in the breast. Numerous studies showed roles of neurotransmitters in the occurrence and progression of cancers which are mediated by their various types of receptors. This study was conducted to evaluate alterations in the expression profile of dopamine receptor genes in peripheral blood mononuclear cells (PBMC) as stress factors in breast cancer patients and the human breast cancer cell line (MCF-7). Peripheral blood samples were obtained from 30 patients and 30 healthy individuals. Total mRNA was extracted from PBMC and MCF-7 cells and RT-PCR was performed to confirm the presence of five dopamine receptors (DRD1-DRD5). Expression changes of dopamine receptor genes were evaluated by real time PCR. We observed that DRD2-DRD4 in PBMCs of breast cancer patients were increased compared to healthy individuals. In addition, all dopamine receptor subtypes but DRD1 were expressed in MCF-7 cells. Therefore, alterations of these receptors as stress factors should be assessed for selecting appropriate drugs such as D2-like agonists for treatment of breast cancer after performing complimentary tests. Determining the expression profile of dopamine receptor genes thus seems promising.

The Association between Codon 192 Polymorphism of Paraoxonase/arylesterase Gene and Plasma HDL-cholesterol level in Korean Population

  • Kang, Byung-Yong;Kim, Ki-Tae;Shin, Jung-Hee;Om, Ae-Son;Lee, Chung-Choo
    • Environmental Mutagens and Carcinogens
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    • v.21 no.1
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    • pp.9-13
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    • 2001
  • Essential hypertension is considered to be a multifactorial disease that is influenced not only by environmental factors but also by genetic factors. Genes involved in lipoprotein synthesis, modification and metabolism are candidates for essential hypertension. The purpose of this study was to estimate gene frequencies of paraoxonase/arylesterase (PON1) gene in Korean population and investigate the relationship between genotypes of this gene and essential hypertension or cardiovascular risk factors. In order to estimate the genotype frequencies, Alw I RFLP of PON1 gene was used as genetic marker. There were no significant differences in allele and genotype frequencies between normotensives and essential hypertensives, respectively. However, Alw I RELP of PON1 gene were significantly associated with plasma HDL-cholesterol level in Korean population (one-way ANOVA test, p=0.008). Therefore, our result suggest that this RFLP of PON1 gene may be protective marker on cardiovascular disease in Korean population.

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Oxalate Accumulation in Forage Plants: Some Agronomic, Climatic and Genetic Aspects

  • Rahman, M.M.;Kawamura, O.
    • Asian-Australasian Journal of Animal Sciences
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    • v.24 no.3
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    • pp.439-448
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    • 2011
  • Oxalic acid is synthesized by a wide range of plants. A few of them are forage plants that can cause oxalate poisoning in ruminants under certain conditions. In this paper, the role of some agronomic, climatic and genetic factors in minimizing oxalate accumulation in forage plants has been discussed. Research indicates that the content of oxalate in forage can be controlled by fertilizer application. For example, nitrate application resulted in higher contents of soluble and insoluble oxalates than ammonium application. With an increased rate of potassium application, soluble oxalate content showed an increasing trend and insoluble oxalate content showed a decreasing trend. With an increased rate of calcium application, soluble oxalate content showed a decreasing trend and insoluble oxalate content showed a reverse trend. Other agronomic factors such as growing season, harvesting practices, plant maturity, plant species, plant variety and plant parts can also have a large effect on oxalate accumulation. However, the potential benefits of the above approaches for improving forage quality have not been fully exploited. In addition, there is still insufficient information to fully utilize means (e.g. plant nutrients, season and soil moisture) to minimize oxalate accumulation in forage plants. Therefore, more research is required for a better understanding of the interactions between oxalate and the above-mentioned factors in forage plants.

A Strategy for Quality Poultry Egg Production II. Egg Interior Quality; Cholesterol Content, Egg Yolk Pigmentation, Controlling Egg weight and Organic Eggs (양질의 계란 생산전략 II. 계란내용물의 질, 콜레스테롤 함량, 난황색, 난중조절, 유기란)

  • 남기홍
    • Korean Journal of Poultry Science
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    • v.27 no.2
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    • pp.133-153
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    • 2000
  • The egg's interior quality is one of the most important criteria for commercial producers and consumers. Internal quality is complex, including aesthetic factors such as taste, freshness, nutritional and processing values, and the genetic influences upon these upon these factors ranges from none to considerable. The rate of cholesterol synthesis in the hen is very high compared to other animals and humans. Genetic selection, diet drugs and other chemicals can alter cholesterol concentration in the plasma of laying hen, but attempts to manipulate the cholesterol concentration in the egg yolk are generally unsuccessful since the cholesterol can only be changed to a small extent. Factors which may affect the degree of pigmentation of the yolk include the type of xanthophyll and its concentration in the feed, the feed composition, and the health of the hen. Several feed ingredients interact with carotenoid pigment to improve or reduce their deposition rates in yolks. Egg weight is determined by genetics, body size prior to first egg housing density, environmental temperature, lighting program, total feed consumption, calcium, phosphorus, niacin, water, methionine, total sulfur amino acids, energy, linoleic acid, fat and protein levels. Eggs need to be promote levels. Eggs need to be promoted a versatile commodity and new processed egg items need to be developed. Organic eggs are laid by hens which were raised in chemical and drug frdd environments. There are still difficulties in producing these eggs due to the availability of organic poultry feeds and cost of organic grains.

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Control of Asymmetric Cell Divisions during Root Ground Tissue Maturation

  • Choi, Ji Won;Lim, Jun
    • Molecules and Cells
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    • v.39 no.7
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    • pp.524-529
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    • 2016
  • Controlling the production of diverse cell/tissue types is essential for the development of multicellular organisms such as animals and plants. The Arabidopsis thaliana root, which contains distinct cells/tissues along longitudinal and radial axes, has served as an elegant model to investigate how genetic programs and environmental signals interact to produce different cell/tissue types. In the root, a series of asymmetric cell divisions (ACDs) give rise to three ground tissue layers at maturity (endodermis, middle cortex, and cortex). Because the middle cortex is formed by a periclinal (parallel to the axis) ACD of the endodermis around 7 to 14 days post-germination, middle cortex formation is used as a parameter to assess maturation of the root ground tissue. Molecular, genetic, and physiological studies have revealed that the control of the timing and extent of middle cortex formation during root maturation relies on the interaction of plant hormones and transcription factors. In particular, abscisic acid and gibberellin act synergistically to regulate the timing and extent of middle cortex formation, unlike their typical antagonism. The SHORT-ROOT, SCARECROW, SCARECROW-LIKE 3, and DELLA transcription factors, all of which belong to the plant-specific GRAS family, play key roles in the regulation of middle cortex formation. Recently, two additional transcription factors, SEUSS and GA- AND ABA-RESPONSIVE ZINC FINGER, have also been characterized during ground tissue maturation. In this review, we provide a detailed account of the regulatory networks that control the timing and extent of middle cortex formation during post-embryonic root development.

Phenotypic Variation and Genetic Correlation of Elytra Colored Patterns of Multicolored Asian Lady Beetles, Harmon axyridis (Coleoptera: Coccinellidae) in Korea (우리나라에서 무당벌레 (Harmonia axyridis: Coccinellidae) 의 초시무늬의 표현형 변이와 유전적 상관)

  • Seo, Mi-Ja;Kang, Eun-Jin;Kang, Myong-Ki;Lee, Hee-Jin;Seok, Hee-Bong;Lee, Dae-Hong;Park, Sun-Nam;Yu, Yong-Man;Youn, Young-Nam
    • Korean journal of applied entomology
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    • v.46 no.2
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    • pp.235-249
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    • 2007
  • The multicolored Asian lady beetles (Harmonia axyridis) has characteristic color patterns, which show great variability within species. Up to now, it has been well known that main factors affected on individual color pattern variations in the population of H axyridis are external, physical, and environmental characteristics. Indeed, there is as yet no evidence to indicate whether the variation is genetic or environmental factors. Also the factors which produce this variation are unknown in this species, although it is suspected that much of the variation is under genetic control. However, the genetic relationships among many of color types were investigated by observing the progeny of each particular pairs. It is worth mentioning a few particular breeding cases to illustrate certain facets of variability, and to indicate examples suitable for genetic analysis of the color pattern variation.

Effects of Fibrinogen Level and Genetic Variation in FGA Gene on Korean Stroke Patients (피브리노겐의 수치 및 중요한 아미노산 변형 돌연변이가 뇌중풍에 미치는 영향)

  • Yang, Yong-Jun;Shin, Yong-Cheol;Ko, Seong-Gyu
    • Journal of Society of Preventive Korean Medicine
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    • v.14 no.1
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    • pp.111-123
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    • 2010
  • Backgrounds : Stroke is characterized by loss of brain functions due to a disturbance in the blood vessels supplying blood to the brain, and classified into hemorrhage and ischemia. Stroke is known to be affected by genetic factors and other diseases such as hypertension and cardiovascular diseases. However, the distinctive association between stroke and genetic variations has not discovered yet. Objectives : This study investigated the effects of fibrinogen level and genetic variations in FGA (Fibrinogen alpha chain) gene on stroke in Korean stroke patients and controls. Methods : DNA samples from 674 stroke patients diagnosed by Oriental medical hospitals and 267 controls were used in this study. Two common single nucleotide polymorphism(SNP) with high minor allele frequency(MAF), rs2070011G/A of promoter region and nonsynonymous rs6050A/G of exon 5 in FGA gene, were targeted for Taqman genotyping. Because the TOAST classification is important to the factors and symptoms of stroke, ischemic patients were further classified into five subtypes using diagnosis and clinical data. One-way ANOVA and chi-square test were used for clinical data and genetic association, respectively. Haploview v4.1 program was used for linkage disequilibrium(LD), haplotype and haplotype block analysis. Results : The levels of red blood cells and fibrinogen from clinical data were shown to be significant factors for the sub-groups of TOAST classification. No significant associations of stroke, hemorrhage, ischemic and subtypes of TOAST with rs2070011 and rs6050 of FGA gene were found(P > 0.05). However, rs2070011 in promoter region and nonsynonymous rs6050 in exon 5 which produce the amino acid change from threonine to alanine showed a haplotype block and three haplotypes of A-G, G-A, A-A, suggesting that rs2070011 and rs6050 might be co-segregated in generic recombination. Although A-A haplotype of stroke patients showed 64-69% low frequency compared to controls, there was no significant association between stroke and haplotype(P > 0.05). Conclusion : This study showed that there was no significant association between stroke and two SNP of rs2070011G/A and nonsynonymous rs6050A/G in FGA gene. However, these two SNP compose a haplotype block and three haplotypes of A-G, G-A, A-A. This finding suggests that rs2070011 and rs6050 are so close as to be positioned as linkage disequilibrium. Nevertheless, no significant association between haplotypes and stroke was found.

Genetic Studies in Some Agronomic Characters in Rapeseed (Brassica napus L.) 1. Genetic analysis for maturity, plant height and grain weight per plant. (유채의 실용형질에 대한 유전연구 -제 1 보 유채의 초장, 성숙기 및 종실중의 유전분석-)

  • Lee, J.I.;Kwon, B.S.;Chae, Y.A.
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.29 no.1
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    • pp.84-88
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    • 1984
  • To obtain basic information on the breeding of early maturing, short plant height rapeseed varieties, the following 7 varieties, Isuzu, Miyuki, Norin 25, Rang, Yongdang, Cresus and Tower were used in diallel crosses in 1979. Maturing date, plant height and grain weight per plant for the parents, $F_1$'s and $F_2$'s of the 7 x 7 partial diallel crosses were measured in 1981 for analysis of their genetic behavior. The results obtained are summarized as follows: 1. The days to maturing of $F_1$'s showed complete dominance for early maturing, and both additive and dominance genetic variances were significant. Number of effective factors in $F_1$'s was 3, but in $F_2$'s was 1. The degree of dominance in $F_1$'s was partial, while in $F_2$'s was complete. Both broad and narrow sense herita-bilities in $F_1$'s was high, while in $F_2$'s was low. 2. Yield per plant in $F_2$'s was controlled by additive component of genetic variance only, but $F_1$'s was different. The degree of dominance in $F_1$'s was complete, while in $F_2$'s was partial. The direction of dominance showed almost complete dominance over high yield and three effective factors was estimated. Yield per plant was controlled by recessive genes. 3. The plant height was controlled by both dominance and additive variance. Dominance was directed toward tall plant height. Number of effective factors was 2, and broad and narrow sense heritability were high in the plant height.

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