• Title/Summary/Keyword: GNB5

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Risk Factors Associated with Gastrointestinal Tract Colonization by Enterobacteriaceae in Neonatal Intensive Care Unit Patients (신생아 집중 치료실에 입원한 신생아에서 장내 세균에 의한 장관 집락화와 관련된 위험 인자)

  • Kim, Min-Ji;Jung, Yu-Jin;Hong, Yoo-Rha;Bae, Il-Kwon
    • Neonatal Medicine
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    • v.18 no.2
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    • pp.272-279
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    • 2011
  • Purpose: The incidence of nosocomial infection caused by Gram-negative bacilli (GNB) has increased in neonatal intensive care units (NICU). This study identified the progression of sepsis caused by GNB colonization and analyzed the risk factors associated with using periodic stool culture surveillance. Methods: We included 86 newborns admitted to the NICU, Kosin University Gospel Hospital from October 2007 to May 2008. Three stool specimens were collected right after birth and two more were collected at 2 week intervals. The risk factors related to GNB colonization were established from each medical record and related references. Results: The incidence of colonization by GNB was 22 (25.6%) per 86 neonates but none had culture-proven sepsis. The three most commonly isolated GNB were Pseudomonas aeruginosa, Enterobacter cloacae, and Citrobacter freundii. Approximately 89% (32/36) of isolated GNB were susceptible to amikacin. The probability of GNB colonization increased in infants who were fed a small volume during enteral feeding. In contrast, delayed enteral feeding resulted in a decreased probability for GNB colonization. Conclusion: Colonized GNB in the intestine was confirmed by enteric surveillance culture of newborns admitted to the NICU. However, we found no evidence of culture-proven GNB sepsis. As lower feeding volume on the colonization day is a risk factor for GNB colonization, the chance for GNB colonization should be considered when feeding intolerance is present.

Rheological properties of arabinogalactan solutions related to the carbohydrate composition of different legumes

  • Kyeongyee Kim;Choon Young Kim
    • Food Science and Preservation
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    • v.30 no.5
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    • pp.785-796
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    • 2023
  • The aim of this study was to elucidate chemical structures and rheological properties of arabinogalactans (AGs) isolated from three legumes including black gram (BG), great northern bean (GNB), and California small white bean (CSWB). The ratio of galactose to arabinose (G/A) in three legumes increased in the order of BG > GNB > CSWB. The rheological measurements of 1-5% (w/v) AG solutions revealed Newtonian and non-Newtonian flow behaviors. BG exhibited yield stress, indicating plastic behavior. Small-amplitude oscillatory tests indicated viscoelastic properties of BG, GNB, and CSWB ranging from solid-like, paste-like, and liquid-like behaviors, respectively. Small-strain oscillatory tests were conducted to assess the structure recovery of the AGs after pre-shearing. G" values of BG and GNB increased, but those of CSWB remained constant after shearing. These results suggest that the chemical structures of the AGs, particularly their G/A ratios, influence their rheological properties.

Factors Influencing Airborne Concentration of Fungi, Bacteria and Gram Negative Bacteria in Kindergarten Classroom (유치원 교실에서 공기 중 박테리아와 곰팡이 발생에 영향을 미치는 요인)

  • Park Donguk;Jo Kyunga;Yoon Chungsik;Han Inyoung;Park Dooyong
    • Journal of Environmental Health Sciences
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    • v.30 no.5 s.81
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    • pp.440-448
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    • 2004
  • Airborne bacteria, gram negative bacteria (GNB) and fungi were measured in 70 class of 17 kindergartens. The objective of this study is to identify the factors influencing airborne concentrations of bacteria, GNB and fungi using multiple regression analysis. The average concentrations of bacteria and fungi exceeded $1,000\;CFU/m^3$. The average of GNB was $3.7{\times}10^2\;CFU/m^3$. This results indicated that air of kindergartens was contaminated with microbes such as bacteria and fungi. ANOVA test found that the concentrations of bacteria, GNB and fungi were significantly different by the characteristics of weather (rain, after rain, sunny) sampling date (July, August, September and October), the location of sampling site (ground level and basement) and the location of toilet (inside class, nearby class and away class). Multiple regression tests concluded that sampling date, the scale of city where kindergartens are located, the location of sampling site and ventilation efficiency can significantly affect the airborne concentration of bacteria, GNB and fungi. Most of these factors could be related moisture. Environmental factors that can cause the increment of moisture should be controlled in order to reduce airborne concentration of bacteria, GNB and fungi. Legal actions concerning prohibition on the presence of toilet inside class and ventilation criteria should be taken.

Increased store-operated Ca2+ entry mediated by GNB5 and STIM1

  • Kang, Namju;Kang, Jung Yun;Park, Soonhong;Shin, Dong Min
    • The Korean Journal of Physiology and Pharmacology
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    • v.22 no.3
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    • pp.343-348
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    • 2018
  • Recent human genetic studies have shown that $G{\beta}5$ is related to various clinical symptoms, such as sinus bradycardia, cognitive disability, and attention deficit hyperactivity disorder. Although the calcium signaling cascade is closely associated with a heterotrimeric G-protein, the function of $G{\beta}5$ in calcium signaling and its relevance to clinical symptoms remain unknown. In this study, we investigated the in vitro changes of store-operated calcium entry (SOCE) with exogenous expression of $G{\beta}5$. The cells expressing $G{\beta}5$ had enhanced SOCE after depletion of calcium ion inside the endoplasmic reticulum. $G{\beta}5$ also augmented Stim1- and Orai1-dependent SOCE. An ORAI1 loss-of-function mutant did not show inhibition of $G{\beta}5$-induced SOCE, and a STIM1-ERM truncation mutant showed no enhancement of SOCE. These results suggested a novel role of GNB5 and Stim1, and provided insight into the regulatory mechanism of SOCE.

Concentrations of Airborne Microorganisms and Endotoxins in Duck Houses (오리 사육장의 공기 중 부유 미생물 및 내독소 노출 농도)

  • Lee, Yun-Keun;Kim, Won;Kim, Hyo-Cher;Park, Dong-Uk
    • Journal of Environmental Health Sciences
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    • v.36 no.3
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    • pp.191-198
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    • 2010
  • The aim of this study was to determine the concentrations of air-borne microorganisms (bacteria, fungi, gram negative bacteria (GNB), endotoxins, and respirable suspended particles (RSPs), and their correlation with environmental parameters (temperature, humidity, and carbon dioxide levels) in duck houses. The mean concentrations of bacteria, fungi, and GNB were very high (> $10^6\;CFU/m^3$), and endotoxin levels exceeded $10^3\;EU/m^3$. Among the various work stages, in the task of receiving ducks, bacteria were $6.2{\times}10^6;CFU/m^3$, and GNB were $5.4{\times}10^6\;CFU/m^3$, while RSPs levels were $397.6\;{\mu}g/m^3$ and endotoxin levels were $47.2{\times}10^3\;EU/m^3$ in the task of dividing the ducks, and fungi were $4.9{\times}10^6\;CFU/m^3$ in the task of shipping the ducks. The concentrations of RSPs and endotoxins were significantly higher in tasks involving greater movement of ducks in the house, relative to tasks involving little movement of ducks (p<0.05). Further, with progression in growth of the ducks, the concentrations of bacteria, GNB, endotoxins, and RSPs were significantly increased. There was significant correlation between levels of GNB with bacteria (r=0.75) and fungi (r=0.86), endotoxins with RSPs (r=0.75), bacteria with fungi (r=0.39), and carbon dioxide with RSPs (r=0.38), bacteria (r=0.33), and endotoxins (r=0.31). These results suggest considerable respiratory hazard for farmers in these environments.

Study of Gene-gene Interaction within GNB3, ACE, ADRB3, ADRB2 among Korean Female Subject (한국인 비만 여성의 GNB3, ACE, ADRB3, ADRB2 유전자 다형성간의 상호관계에 관한 연구)

  • Choi Hyun;Bae Hyun su;Hong Moo chang;Shin Hyun Dae;Shin Min Kyu
    • Journal of Physiology & Pathology in Korean Medicine
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    • v.18 no.5
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    • pp.1426-1436
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    • 2004
  • There have been several reports on the relationship between G protein β3 subunit gene (GNB3), angiotensin converting enzyme gene (ACE), β3-adrenergic receptor gene (ADRB3), and β2-adrenergic receptor gene (ADRB2) genotype and obesity or obesity related disease. The objective of this study was to examine the relationship between the combinations of these four genes' polymorphism and probability of obesity related disease in Korean female subjects. The experimental group was consisted of 85 obese Korean female subjects (body mass index, BMI≥27㎏/㎡). To determine the polymorphism, genomic DNA was isolated, and PCR was performed. Serological examinations (fasting plasma glucose, FPG; aspartate aminotranferase, AST; alanine aminotransferase, ALT; total cholesterol, TC; triglyceride, TG; high density lipoprotein-cholesterol, HDL; low density lipoprotein-choles terol, LDL) were carried by an autoanalyzer and serological methods. BMI, waist circumference (WC), hip circumference and waist hip ratio (WHR) were measured. Consequencely in the analysis with grouping of general genotyping and variant allele carrier/non-carrier, the result was not significantly different within all gene combinations and polymorphic pairings except higher waist circumference in Arg16Arg group of ADRB2 codon16 (P=0.024). And there was no significantly contrast result about age, height, weight, AST and ALT that are index feature of liver and gall bladder disease in polymorphic pairings of gene combinations. However, the statistical analysis of waist-hip ratio and waist circumference that could be recognized as the physical type of obesity showed T-Arg16 pairing carrier in GNB3-ADRB2 codon16 combination had increased WHR and WC significantly (P=0.046 and P=0.015 respectively). Futhermore, the levels of total cholesterol (TC) and low density lipoprotein choresteral (LDL) were significantly lower in C-I pairing of GNB3-ACE combination (P=0.032 and P=0.005). These results suggest that the T-Arg16 pairing carrier in GNB3-ADRB2 codon16 gene might have increased waist circumference and C-I pairing carrier in GNB3-ACE combination have lower possibility of contraction of cardiovascular disease related cholesterol and LDL despite of obese state.

Identification of Pb-Zn ore under the condition of low count rate detection of slim hole based on PGNAA technology

  • Haolong Huang;Pingkun Cai;Wenbao Jia;Yan Zhang
    • Nuclear Engineering and Technology
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    • v.55 no.5
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    • pp.1708-1717
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    • 2023
  • The grade analysis of lead-zinc ore is the basis for the optimal development and utilization of deposits. In this study, a method combining Prompt Gamma Neutron Activation Analysis (PGNAA) technology and machine learning is proposed for lead-zinc mine borehole logging, which can identify lead-zinc ores of different grades and gangue in the formation, providing real-time grade information qualitatively and semi-quantitatively. Firstly, Monte Carlo simulation is used to obtain a gamma-ray spectrum data set for training and testing machine learning classification algorithms. These spectra are broadened, normalized and separated into inelastic scattering and capture spectra, and then used to fit different classifier models. When the comprehensive grade boundary of high- and low-grade ores is set to 5%, the evaluation metrics calculated by the 5-fold cross-validation show that the SVM (Support Vector Machine), KNN (K-Nearest Neighbor), GNB (Gaussian Naive Bayes) and RF (Random Forest) models can effectively distinguish lead-zinc ore from gangue. At the same time, the GNB model has achieved the optimal accuracy of 91.45% when identifying high- and low-grade ores, and the F1 score for both types of ores is greater than 0.9.

Etiology of Bacteremia in Children with Hemato-oncologic Diseases from a Single Center from 2011 to 2015 (단일 기관에서의 소아 혈액종양 환자에서 발생한 균혈증의 원인균 및 임상 양상: 2011-2015년)

  • Park, Ji Young;Yun, Ki Wook;Kang, Hyoung Jin;Park, Kyung Duk;Shin, Hee Young;Lee, Hoan Jong;Choi, Eun Hwa
    • Pediatric Infection and Vaccine
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    • v.24 no.2
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    • pp.71-78
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    • 2017
  • Purpose: The aim of this study was to identify the pathogens of blood stream infection (BSI) in children with hemato-oncologic disorders, to analyze susceptibility patterns of microorganisms to guide empirical antimicrobial therapy, and to compare temporal trends of the pathogen and antimicrobial susceptibility with those of previous studies. Methods: We retrospectively analyzed the medical records of children with hemato-oncologic disorders whose blood culture grew pathogens at the Seoul National University Children's Hospital between 2011 and 2015. Results: A total of 167 patients developed 221 episodes of bacteremia. Among 229 pathogens, gram-negative bacteria (GNB) accounted for 69.0% (64.0% in 2002 to 2005, 63.4% in 2006 to 2010); gram-positive bacteria (GPB) accounted for 28.8% (31.3% in 2002 to 2005, 34.6% in 2006 to 2010); and fungus accounted for 2.2%. Among GNB, Klebsiella species (53.2%, 84/158) and Escherichia coli (19.6%, 31/158) were common. Staphylococcus aureus (48.5%, 32/66) and viridans streptococci (21.2%, 14/66) were frequently isolated among GPB. The susceptibilities of oxacillin and vancomycin in GPB were 54.8% and 96.9% (51.5% and 95.5% in 2002 to 2005; 34.1% and 90.5% in 2006 to 2010), respectively, whereas in GNB, the susceptibilities of cefotaxime, piperacillin/tazobactam, and imipenem were 73.2%, 77.2%, and 92.6% (75.9%, 82.8%, and 93.4% in 2002 to 2005; 62.8%, 82.9%, 93.8% and in 2006 to 2010), respectively. There were no significant differences in the proportion of etiologic agents or the antimicrobial susceptibilities between the current study and that of the previous two studies from 2002 to 2010. Overall fatality rate was 13.1%. Conclusions: GNB predominated in BSI among children with hemato-oncologic disorders. The etiology of bacteremia and antimicrobial susceptibility were comparable to those of the previous studies. Thus, piperacillin/tazobactam can be used as the initial empirical antimicrobial agent in febrile neutropenia.

Exposure Level of Airborne Bacteria in the University Laboratories in Seoul, Korea

  • Hwang, Sung-Ho;Yoo, Kyong-Nam;Park, Ji-Ho;Park, Dong-Uk;Yoon, Chung-Sik
    • Journal of Environmental Health Sciences
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    • v.35 no.5
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    • pp.355-361
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    • 2009
  • This study evaluated the bacterial concentrations and affecting factors at the laboratories of a university in Seoul, Korea. Thirty-three samples of total airborne bacteria (TAB) and eighteen samples of gram negative bacteria (GNB) were collected from both microbiology laboratories (7) and chemistry laboratories (6). GM (GSD) of TAB and GNB concentrations were 194 (2.52) $cfu/m^3$, 24 (4.1) $cfu/m^3$, respectively. TAB concentrations in the chemical laboratories (GM (GSD): 193 (2.0) $cfu/m^3$) were not significantly different from those in microbial laboratories (GM (GSD): 202 (2.7) $cfu/m^3$, (p>0.05)). GM (GSD) of TAB concentrationsat the top of sink, the center of laboratory, and the front of ventilation ventilation device within laboratories, 182 (3.2) $cfu/m^3$, 217 (2.2) $cfu/m^3$, 176 (2.4) $cfu/m^3$, respectively, were not significantly different (p=0.48). Related factors were measured such as temperature, relative humidity, floor of laboratory, number of persons and laboratory area. TAB concentrations were significantly related to temperature (r=0.36, p<0.05), and the floor of laboratory and temperature were also significantly related (r=0.49, p<0.001). However, other factors such as relative humidity, number of persons and laboratory area did not show any significant relationship with TAB concentrations (p>0.05). TAB concentrations were affected significantly by cleaning frequency (p<0.001) and floor of laboratory (p<0.05). There was also a significant difference (p<0.01) between TAB indoor concentrations and TAB outdoor concentrations. However, other factors such as general ventilation did not affect TAB concentrations (p>0.05) in this study.

Rational budgeting approach as a nutrient management tool for mixed crop-swine farms in Korea

  • Reza, Arif;Shim, Soomin;Kim, Seungsoo;Ahn, Sungil;Won, Seunggun;Ra, Changsix
    • Asian-Australasian Journal of Animal Sciences
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    • v.33 no.9
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    • pp.1520-1532
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    • 2020
  • Objective: Due to rapid economic return, mixed crop-swine farming systems in Korea have become more intensive. Intensive farming practices often cause nutrient surpluses and lead to environmental pollution. Nutrient budgets can be used to evaluate the environmental impact and as a regulatory policy instrument for nutrient management. This study was conducted to select a nutrient budgeting approach applicable to the mixed crop-swine farms in Korea and suggest an effective manure treatment method to reduce on-farm nutrient production. Methods: In this study, we compared current and ideal gross nutrient balance (GNB) approaches of Organisation for Economic Co-operation and Development and soil system budget (SSB) approach with reference to on-farm manure treatment processes. Data obtained from farm census and published literature were used to develop the farm nutrient budgets. Results: The average nitrogen (N) and phosphorus (P) surpluses were approximately 11 times and over 7 times respectively higher in the GNB approaches than the SSB. After solid-liquid separation of manure, during liquid composting a change in aeration method from intermittent to continuous reduced the N and P loading about 50% and 47%, respectively. Although changing in solid composting method from turning only to turning+aeration improved the N removal efficiency by 30.5%, not much improvement in P removal efficiency was observed. Conclusion: Although the GNB approaches depict the impact of nutrients produced in the mixed crop-swine farms on the overall agricultural environment, the SSB approach shows the partitioning among different nutrient loss pathways and storage of nutrients within the soil system; thus, can help design sustainable nutrient management plans for the mixed cropswine farms. The study also suggests that continuous aeration for liquid composting and turning+aeration for solid composting can reduce nutrient loading to the soil.