• 제목/요약/키워드: G-structure

검색결과 5,131건 처리시간 0.029초

Label/Quencher-Free Detection of Exon Deletion Mutation in Epidermal Growth Factor Receptor Gene Using G-Quadruplex-Inducing DNA Probe

  • Kim, Hyo Ryoung;Lee, Il Joon;Kim, Dong-Eun
    • Journal of Microbiology and Biotechnology
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    • 제27권1호
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    • pp.72-76
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    • 2017
  • Detection of exon 19 deletion mutation in the epidermal growth factor receptor (EGFR) gene, which results in increased and sustained phosphorylation of EGFR, is important for diagnosis and treatment guidelines in non-small-cell lung cancer. Here, we have developed a simple and convenient detection system using the interaction between G-quadruplex and fluorophore thioflavin T (ThT) for discriminating EGFR exon 19 deletion mutant DNA from wild type without a label and quencher. In the presence of exon 19 deletion mutant DNA, the probe DNAs annealed to the target sequences were transformed into G-quadruplex structure. Subsequent intercalation of ThT into the G-quadruplex resulted in a light-up fluorescence signal, which reflects the amount of mutant DNA. Due to stark differences in fluorescence intensity between mutant and wild-type DNA, we suggest that the induced G-quadruplex structure in the probe DNA can report the presence of cancer-causing deletion mutant DNAs with high sensitivity.

Effects of Penicillin G on Morphology and Certain Physiological Parameters of Lactobacillus acidophilus ATCC 4356

  • Khaleghi, M.;Kermanshahi, R. Kasra;Zarkesh-Esfahani, S.H.
    • Journal of Microbiology and Biotechnology
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    • 제21권8호
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    • pp.822-829
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    • 2011
  • Evidence shows that probiotic bacteria can undergo substantial structural and morphological changes in response to environmental stresses, including antibiotics. Therefore, this study investigated the effects of penicillin G (0.015, 0.03, and 0.06 mg/l) on the morphology and adhesion of Lactobacillus acidophilus ATCC 4356, including the colony morphotype, biofilm production, hydrophobicity, $H_2_O2$ formation, S-layer structure, and slpA gene expression. Whereas only smooth colonies grew in the presence of penicillin, rough and smooth colony types were observed in the control group. L. acidophilus ATCC 4356 was found to be hydrophobic under normal conditions, yet its hydrophobicity decreased in the presence of the antibiotic. No biofilm was produced by the bacterium, despite testing a variety of different culture conditions; however, treatment with penicillin G (0.015-0.06 mg/l) significantly decreased its production of $H_2_O_2$ formation and altered the S-layer protein structure and slpA gene expression. The S-protein expression decreased with 0.015 mg/l penicillin G, yet increased with 0.03 and 0.06 mg/l penicillin G. In addition, the slpA gene expression decreased in the presence of 0.015 mg/l of the antibiotic. In conclusion, penicillin G was able to alter the S-layer protein production, slpA gene expression, and certain physicochemical properties of Lactobacillus acidophilus ATCC 4356.

Hierarchically nanoporous carbons derived from empty fruit bunches for high performance supercapacitors

  • Choi, Min Sung;Park, Sulki;Lee, Hyunjoo;Park, Ho Seok
    • Carbon letters
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    • 제25권
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    • pp.103-112
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    • 2018
  • Hierarchically porous, chemically activated carbon materials are readily derived from biomass using hydrothermal carbonization (HTC) and chemical activation processes. In this study, empty fruit bunches (EFB) were chosen as the carbon source due to their sustainability, high lignin-content, abundance, and low cost. The lignin content in the EFB was condensed and carbonized into a bulk non-porous solid via the HTC process, and then transformed into a hierarchical porous structure consisting of macro- and micropores by chemical activation. As confirmed by various characterization results, the optimum activation temperature for supercapacitor applications was determined to be $700^{\circ}C$. The enhanced capacitive performance is attributed to the textural property of the extremely high specific surface area of $2861.4m^2\;g^{-1}$. The prepared material exhibited hierarchical porosity and surface features with oxygen functionalities, such as carboxyl and hydroxyl groups, suitable for pseudocapacitance. Finally, the as-optimized nanoporous carbons exhibited remarkable capacitive performance, with a specific capacitance of $402.3F\;g^{-1}$ at $0.5A\;g^{-1}$, a good rate capability of 79.8% at current densities from $0.5A\;g^{-1}$ to $10A\;g^{-1}$, and excellent life cycle behavior of 10,000 cycles with 96.5% capacitance retention at $20A\;g^{-1}$.

무기물계 폐기물로 합성한 제올라이트의 코발트, 니켈, 구리 이온의 회수 성능 (The Recovery Performance of Co, Ni, and Cu Ions Using Zeolites Synthesized from Inorganic Solid Wastes)

  • 이창한
    • 한국물환경학회지
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    • 제28권5호
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    • pp.723-728
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    • 2012
  • In this study, zeolites were synthesized by a fusion and a hydrothermal methods using a coal fly ash and a waste catalyst. The recovery performance of metal ions on the structure property of synthetic zeolites was evaluated as comparing the adsorption kinetics (Lagergen 2nd order model) and isotherm (Langmuir model) of $Co^{2+},\;Ni^{2+}$, and $Cu^{2+}$ ions. The synthetic zeolites (Z-C1 and Z-W5) were similarly assigned to XRD peaks in a reagent grade Na-A zeolite (Z-WK : $Na_{12}Al_{12}Si_{12}O_{48}\;27.4H_2O$). Adsorption rates of Z-W5 and Z-C1 were in the order of $Cu^{2+}\;>\;Co^{2+}\;>\;Ni^{2+}\;and\;Ni^{2+}\;>\;Cu^{2+}\;>\;Co^{2+}$, respectively. They had influenced upon structure properties of zeolite. Selectivities of metal ions and maximum equilibrium adsorption capacities, $q_{max}$, in Z-C1 and Z-W5 were in the order of $Ni^{2+}$ (127.9 mg/g) > $Cu^{2+}$ (94.7 mg/g) > $Co^{2+}$ (82.6 mg/g) and $Cu^{2+}$ (141.3 mg/g) > $Co^{2+}$ (122.2 mg/g) > $Ni^{2+}$ (87.6 mg/g), respectively. The results show that the synthetic zeolites, Z-C1 and Z-W5, are able to recover metal ions selectively in wastewater.

주철의 흑연구상화에 미치는 기포의 영향 (The Effects of Gas Bubbles on the Graphite Spheroidization in Cast Iron)

  • 박실라;최답천;김관휴
    • 한국주조공학회지
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    • 제9권6호
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    • pp.474-482
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    • 1989
  • The aim of this research is to investigate the effects of gas bubbles on the formation of spheroidal graphite in cast iron, Fe-Si-8%Mg alloy, mischmetal hydride($MmH_2$) and $CaCO_3$, which discharge various amounts of Mg, $H_2$ and $Co_2$, gases, were added to Fe-3.9% C-2.0%Si melt and the melt was innoculated with 0.3wt% of 75%Fe-Si. The spheroidal graphites and/or compacted vermicular graphites were produced with more than 0.625cc/g of Mg gas or more than 0.3125cc/g of $H_2$ gas while $CO_2$ gas did not contribute to graphite spheroidization. Nodule counts increased with the amount of Fe-Si-Mg added ; but they decreased with the amount of $MmH_2$ added because the number of effective gas bubbles decrease with the increase in Mm residual. The bull's eye structure was revealed with 0.625cc/g, 1.25cc/g of Mg and 0.3125cc/g of $H_2$ ; the ledeburite structure was revealed with more than 0.625cc/g of $H_2$.

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G 방정식을 이용한 실린더 챔버 내부 둔각물체 주위의 난류 예 혼합 화염 해석 (Application of G-equation to large eddy simulation of turbulent premixed flame around a bluff body inside a cylindrical chamber)

  • 최창용;박남섭;고상철
    • Journal of Advanced Marine Engineering and Technology
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    • 제29권4호
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    • pp.391-398
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    • 2005
  • In this investigation, turbulent premixed combustion and flame front propagation in a gas turbine combustion chamber is studied. Direct numerical simulation of turbulent reacting flows demands extremely high computational resources, especially in more complicated geometry. The alternative choice may be left for Large Eddy Simulation (LES) by which only large scales are solved directly. In combustion problems, capturing the large scales' behavior without solving the details of small scales is a difficult task. Using a transport equation for description of the flame front propagation and therefore avoiding the calculation of inner flame structure is the basic idea of this study. For this purpose. the so-called G-equation has been used by which any iso-level of the G variable provides the flame location. A comparison with the experiment indicates that the present method can predict a turbulent velocity field and also capture a instantaneous 3-dimensional flame structure.

A Structure-Function Relationship Exists for Ginsenosides in Reducing Cell Proliferation and Inducing Apoptosis in THP-1 Cells

  • Popovich David G.;Kitts David D.
    • 고려인삼학회:학술대회논문집
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    • 고려인삼학회 2002년도 학술대회지
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    • pp.545-555
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    • 2002
  • Ginsenosides of 20(S)-protopanaxadiol and 20(S)-protopanaxatriol classification including the aglycones, PD, PI and ginsenosides Rh2, Rhl were shown to posses characteristic effects on proliferation of THP-l human leukaemia cells. A similar result was not apparent for ginsenoside Rg3 or dexamathasone. The concentration to inhibit $50\%$ of cells $(LC_{50})$ for PD, Rh2, PI and Rhl were 13 ${\mu}g/mL,\;15{\mu}g/mL,\;19{\mu}g/mL\;and\;210\;{\mu}g/mL$ respectively. Cell cycle analysis showed apoptosis with PD and PI treatment of THP-1 cells resulting in a build up of sub-G1 cells after 24, 48 and 72 hours of treatment. Rh2, and dexamathasone treatments also increased apoptotic cells after 24 hours, where as Rhl did not. After 48 and 72 hours Rh2, Rhl and dexamathasone similarly increased apoptosis, but these effects were significantly (P<0.05) lower than observed for both PD and PI treatments. Furthermore, treatments that produced the largest build up of apoptotic cells were also found to have the largest release of lactate dehydrogenase (LDH). It can be concluded from these studies that the presence of sugars to PD and PI aglycone structure reduces the potency to induce apoptosis, and alternately alter membrane integrity. These cytotoxic effects to THP-l cells were different from dexamethasone.

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Platinum Decoration of a 3D Oxidized Graphitic Carbon Nitride/Graphene Aerogel for Enhanced Visible-Light Photocatalytic Hydrogen Evolution

  • Thi Kieu Oanh Nguyen;Thanh Truong Dang;Tahereh Mahvelati-Shamsabadi;Jin Suk Chung
    • Korean Chemical Engineering Research
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    • 제61권4호
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    • pp.627-634
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    • 2023
  • Graphitic carbon nitride (g-C3N4) has attracted considerable attention since its discovery for its catalysis of water splitting to hydrogen and oxygen under visible light irradiation. However, pristine g-C3N4 confers only low photocatalytic efficiency and requires surface cocatalysts to reach moderate activity due to a lack of accessible surface active sites. Inspired by the high specific surface area and superior electron transfer of graphene, we developed a strongly coupled binary structure of graphene and g-C3N4 aerogel with 3D porous skeleton. The as-prepared 3D structure photocatalysts achieve a high surface area that favors efficient photogenerated charge separation and transfer, enhances the light-harvesting efficiency, and significantly improves the photocatalytic hydrogen evolution rate as well. The photocatalyst performance is observed to be optimized at the ratio 3:7 (g-C3N4:GO), leading to photocatalytic H2 evolution of 16125.1 mmol. g-1. h-1 under visible light irradiation, more than 161 times higher than the rate achieved by bulk g-C3N4.