• 제목/요약/키워드: Fungal structure

검색결과 156건 처리시간 0.02초

선천성 면역조절자인 항생펩타이드 분류 (Classification of Antimicrobial Peptides among the Innate Immune Modulators)

  • 이종환
    • 생명과학회지
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    • 제25권7호
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    • pp.833-838
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    • 2015
  • 다제약제 내성을 가지는 슈퍼 박테리아, 곰팡이, 바이러스, 기생충 감염은 주요한 건강위협인자들이다. 하지만, 건강위협 상황을 극복하기위해 현재 약제의 대안들중 항생펩타이드를 들 수 있다. 항생펩타이드는 자연계 다양한 종에서 생산된다. 항생펩타이드는 작은 단백질로 어류, 양서류, 파충류, 식물 그리고 동물의 감염으로부터 다세포생명체를 보호하는 선천성 면역에 관여하고 있다. 1980년대 이후로 매년 항생펩타이드의 수가 증가하고 있다. 박테리아, 원생생물, 곰팡이, 식물, 동물로부터 동정된 2,000가지 이상의 항생펩타이드가 항생펩타이드 데이터베이스에 등록되어 있다. 이러한 항생펩타이드의 대부분은 11-50개의 아미노산으로 구성되어 있고 하전상태는 0에서 +7까지이며 소수성은 31-70%를 차지하고 있다. 본 보고는 항생펩타이드를 생물학적 원천, 생물학적 기능, 펩타이드 성질, 공유결합패턴, 3차구조등에 의해 분류하였다. 항생펩타이드의 기능은 항균작용외에 세포주화성과 같은 세포생물학적 활성에도 기능성을 가지고 있다. 더욱이 림프절 스트로마로부터 기원한 fibroblastic reticular cell (FRC)에 염증상황 유도시 항생펩타이드가 발현되는 것을 확인하였다. FRC로부터 유도된 항생펩타이드는 whey acidic protein (WAP) 도메인을 포함하고 있었다. 이것은 단백질 도메인에 의해서도 항생펩타이드를 분류 할 수 있다는 것을 제시한다.

식물의 자가불화합성, 최근의 진보 (Recent Advances in the Studies of Self-Incompatibility of plants)

  • 한창열;한지학
    • 식물조직배양학회지
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    • 제21권5호
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    • pp.253-275
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    • 1994
  • Many flowering plants possess genetically controlled self -incompatibility (SI) system that prevents inbreeding and promotes outcrosses. SI is usually controlled by a single, multiallelic S-locus. In gametophytically controlled system, SI results when the S-allele of the pollen is matched by one of the two S-alleles in the style, while in the sporophytic system self-incompatible reaction occurs by the interaction between the pistil genotype and genotype of, not the pollen, but the pollen parent In the former system the self-incompatible phenotype of pollen is determined by the haploid genome of the pollen itself but in the latter the pollen phenotype is governed by the genotype of the pollen parent along with the occurrence of either to-dominant or dominant/recessive allelic interactions. In the sporophytic type the inhibition reaction occurs within minutes following pollen-stigma contact, the incompatible pollen grains usually failing to germinate, whereas in gametophytic system pollen tube inhibition takes place during growth in the transmitting tissue of the style. Recognition and rejection of self pollen are the result of interaction between the S-locus protein in the pistil and the pollen protein. In the gametophytic SI the S-associated glycoprotein which is similar to the fungal ribonuclease in structure and function are localized at the intercellular matrix in the transmitting tissue of the style, with the highest concentration in the collar of the stigma, while in the sporophytic SI deposit of abundant S-locus specific glycoprotein (SLSG).is detected in the cell wall of stigmatic papillae of the open flowers. In the gametophytic system S-gene is expressed mostly at the stigmatic collar the upper third of the style length and in the pollen after meiosis. On the other hand, in the sporophytic SI S-glycoprotein gene is expressed in the papillar cells of the stigma as well as in e sporophytic tape is cells of anther wall. Recognition and rejection of self pollen in the gametophytic type is the reaction between the ribonuclease in the transmitting tissue of the style and the protein in the cytoplasm of pollen tube, whereas in the sporophytic system the inhibition of selfed pollen is caused by the interaction between the Sycoprotein in the wall of stigmatic papillar cell and the tapetum-origin protein deposited on the outer wall of the pollen grain. The claim that the S-allele-associated proteins are involved in recognition and rejection of self pollen has been made merely based on indirect evidence. Recently it has been verified that inhibition of synthesis of S$_3$ protein in Petunia inflata plants of S$_2$S$_3$ genotype by the antisense S$_3$ gene resulted in failure of the transgenic plant to reject S$_3$ pollen and that expression of the transgenic encoding S$_3$ protein in the S$_1$S$_2$ genotype confers on the transgenic plant the ability to reject S$_3$ pollen. These finding Provide direct evidence that S-proteins control the s elf-incompatibility behavior of the pistil.

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시설 딸기의 재배방법에 따른 토양 미생물군집 비교 (Comparison of Soil Microbial Communities to Different Practice for Strawberry Cultivation in Controlled Horticultural Land)

  • 민세규;박수선;이영한
    • 한국토양비료학회지
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    • 제44권3호
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    • pp.479-484
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    • 2011
  • 시설 딸기 유기재배, 무농약재배 그리고 관행재배 방법이 토양 미생물 생태계의 변화에 미치는 영향을 FAME 분석으로 검토하였다. 유기재배는 관행재배에 비해 총 FAME 함량은 1.2배, 총 세균 함량은 1.4배, 그람음성 세균은 1.5배, 그람양성 세균은 1.2배, 방선균 함량은 1.5배 높았다 (p<0.05). 미생물 군집은 유기재배와 무농약재배가 관행재배에 비해 총 세균 및 그람음성 세균의 군집비율이 높은 반면, 곰팡이 군집비율은 낮았다 (p<0.05). 주성분 분석결과 주성분 PC1은 50.9%, 주성분 PC2는 30.5%로 관행재배, 무농약재배 및 관행재배의 미생물 군집에 대한 유의적인 차이를 보였으며 방선균 군집비율은 유기재배에 대한 지표로서 나타났다. 무농약재배는 토양 염류가 높아 cy19:0과 18:$1{\omega}7c$ 비율은 1.27로 높았으며 불포화지방산과 포화지방산의 비율은 0.56로 낮게 나타났다 (p<0.05). 따라서 미생물의 다양성을 유지하고 스트레스를 경감시킬 수 있는 방법으로 토양 양분을 적정수준으로 관리하는 것이 무엇보다 중요한 것으로 판단되었다.

다기능 탄산칼슘 형성세균의 시멘트 건축물 적용위한 부식능 평가 및 건축물 정주미생물 중 방제 대상 결정 (Assessment of Bio-corrosive Effect and Determination of Controlling Targets among Microflora for Application of Multi-functional CFB on Cement Structure)

  • 박종명;박성진;김사열
    • 생명과학회지
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    • 제25권2호
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    • pp.237-242
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    • 2015
  • 탄산칼슘 형성세균에 의한 건축물 균열보수 및 그들의 내구성 증진은 기존 화학제에 비해 친환경적이며, 영구적이라는 측면에서 그들의 응용에 대한 연구는 중요한 위치를 차지하고 있다. 그러나 균열복구 기전이 세균의 대사에 의한 calcite crystal 형성과정에서 기인되는 것으로, 대사과정 중 산 형성으로 시멘트 기반 콘크리트 건축물에 대한 위해 가능성 논란이 지속 제기되었다. 따라서 본 연구는 시멘트 모르타르에 대한 생물학적 부식능이 있는 방제대상 미생물을 결정하고 시멘트 콘크리트 건축물에의 안전한 적용을 위한 다기능성 탄산칼슘 형성세균을 평가하기 위해 수행되었다. 이를 위해 첫째, 건축물에서 분리된 균사형 진균, 효모, 세균 균주들을 대상으로 chalky test를 실시하여 $CaCO_3$에 대한 가용화능을 평가하였다. 그 결과 건축물에서 분리된 세균 균주의 경우 가용화 능이 없는 것으로 평가되었으며, C. sphaerospermum KNUC253 및 P. prolifica KNUC263 균주가 $CaCO_3$에 대한 가용화 활성을 보여, 시멘트 기반 건축물 표면에서 방제되어야 균주로 판단된다. 둘째, 독도 토양 및 건축물에서 분리되어 시멘트 표면 진균생장 억제효과, 시멘트 표면균열을 수복 및 수분 침투력 감소효과가 보고된 특허등록 균주 A. nicotianae KNUC2100, B. thuringiensis KNUC2103, S. maltophilia KNUC2100 및 B. aryabhatti KNUC205들이 $CaCO_3$을 가용화하지 않음을 볼 때 산 형성으로 인한 시멘트 모르타르 주성분인 $CaCO_3$에 대한 위해는 없을 것으로 평가된다. 이에 더하여 그들 중 B. aryabhatti KNUC205, A. nicotianae KNUC2100의 경우 건축소재 열화가능성의 판단근거로 널리 활용되고 있는 bio-degradative assay에서 다양한 고분자물질 구성요소에 대해 활성을 나타내지 않아 다양한 건축환경에 대해 활용 가능성을 보여주었다.

멸구류(類)(벼멸구 및 흰등멸구)와 수도병해(水稻病害)의 복합발생피해(複合發生被害)에 관(關)한 연구(硏究) (Relationship between Planthoppers (Nilaparvata lugens and Sogatella furcifera) and Rice Diseases)

  • 이승찬;D.M. 마티아;T.W. 뮤우;J.S. 소리노;E.A. 하인리크
    • 한국응용곤충학회지
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    • 제24권2호
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    • pp.65-70
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    • 1985
  • 수도(水稻) 병해충(病害蟲)의 동시발생(同時發生) 피해(被害)에 관한 연구(硏究)를 위한 기초시험(基礎試驗)으로 벼멸구와 흰등멸구의 복합발생(複合發生)에 따른 서식처선호성(棲息處選好性)을 확인(確認)코저 감수성(感受性) 품종(品種)인 IR22와 저항성(抵抗性)인 IR36(분벽최성기(分蘗最盛期)부터 흰등멸구에도 저항성(抵抗性)임)을 공시(供試)하여 조사(調査)한 결과(結果) 벼품종별(品種別), 생육시기별(生育時期別) 및 발생밀도(發生密度)에 따라 다소(多少) 차이(差異)는 있으나 일반적(一般的)으로 흰등멸구는 대부분(大部分) 벼 윗부분(部分)에 서식(棲息)하였고 벼멸구는 아래부분(部分)에 서식(棲息)함을 알 수 있었다. 두 종(種)의 복합발생시(複合發生時)의 서식선호성(棲息選好性)은 상대종(相對種)의 발생(發生)에 영향(影響)을 받지 않았고 각각 일정(一定)한 서식처(棲息處)를 선호(選好)하는 경향(傾向)이었다. 벼멸구의 생태형(生態型) 2에 대(對)하여 반응(反應)이 다른 다섯가지 품종(品種)(IR22 및 TN1: 감수성(感受性), Triveni 및 ASD7: 중정도저항성(中程度抵抗性), IR42: 抵抗性)을 공시(供試)하여 문고병(紋枯病)과 벼멸구의 동시발생(同時發生)에 의한 피해(被害)를 조사(調査)한 결과(結果) 병해충(病害蟲)의 동시발생(同時發生) 피해(被害)는 병원균(病原菌)이 단독발생(單獨發生)했을 때 보다 문고병(紋枯病)의 발병(發病)을 현저(顯著)히 조장(助長)시켰으며 병증(病症)의 발현속도(發現速度)도 빨랐고 균계생장(菌系生長)도 왕성(旺盛)하여 감염기(感染器)(infection structure)의 형성(形成)도 풍부(豊富)하였다. 벼멸구의 생태형(生態型) 2에 대(對)한 품종(品種) 반응(反應)과는 상관없이 벼멸구와 문고병(紋枯病)과의 동시발생(同時發生)은 벼멸구 단독발생(單獨發生)에 비(比)하여 더 심한 고사현상(枯死現象)(hopperburn)을 일으켰다. 즉 문고병(紋枯病) 병원균(病原菌)과 벼멸구의 동시발생(同時發生)은 상승적(相乘的) 피해(被害)가 나타남을 확인(確認)하였다.

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Brief Introduction of Research Progresses in Control and Biocontrol of Clubroot Disease in China

  • He, Yueqiu;Wu, Yixin;He, Pengfei;Li, Xinyu
    • 한국균학회소식:학술대회논문집
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    • 한국균학회 2015년도 춘계학술대회 및 임시총회
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    • pp.45-46
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    • 2015
  • Clubroot disease of crucifers has occurred since 1957. It has spread to the whole China, especially in the southwest and nourtheast where it causes 30-80% loss in some fields. The disease has being expanded in the recent years as seeds are imported and the floating seedling system practices. For its effective control, the Ministry of Agriculture of China set up a program in 2010 and a research team led by Dr. Yueqiu HE, Yunnan Agricultural University. The team includes 20 main reseachers of 11 universities and 5 institutions. After 5 years, the team has made a lot of progresses in disease occurrence regulation, resources collection, resistance identification and breeding, biological agent exploration, formulation, chemicals evaluation, and control strategy. About 1200 collections of local and commercial crucifers were identified in the field and by artificiall inoculation in the laboratories, 10 resistant cultivars were breeded including 7 Chinese cabbages and 3 cabbages. More than 800 antagostic strains were isolated including bacteria, stretomyces and fungi. Around 100 chemicals were evaluated in the field and greenhouse based on its control effect, among them, 6 showed high control effect, especially fluazinam and cyazofamid could control about 80% the disease. However, fluzinam has negative effect on soil microbes. Clubroot disease could not be controlled by bioagents and chemicals once when the pathogen Plasmodiophora brassicae infected its hosts and set up the parasitic relationship. We found the earlier the pathogent infected its host, the severer the disease was. Therefore, early control was the most effective. For Chinese cabbage, all controlling measures should be taken in the early 30 days because the new infection could not cause severe symptom after 30 days of seeding. For example, a biocontrol agent, Bacillus subtilis Strain XF-1 could control the disease 70%-85% averagely when it mixed with seedling substrate and was drenching 3 times after transplanting, i.e. immediately, 7 days, 14 days. XF-1 has been deeply researched in control mechanisms, its genome, and development and application of biocontrol formulate. It could produce antagonistic protein, enzyme, antibiotics and IAA, which promoted rhizogenesis and growth. Its The genome was sequenced by Illumina/Solexa Genome Analyzer to assembled into 20 scaffolds then the gaps between scaffolds were filled by long fragment PCR amplification to obtain complet genmone with 4,061,186 bp in size. The whole genome was found to have 43.8% GC, 108 tandem repeats with an average of 2.65 copies and 84 transposons. The CDSs were predicted as 3,853 in which 112 CDSs were predicted to secondary metabolite biosynthesis, transport and catabolism. Among those, five NRPS/PKS giant gene clusters being responsible for the biosynthesis of polyketide (pksABCDEFHJLMNRS in size 72.9 kb), surfactin(srfABCD, 26.148 kb, bacilysin(bacABCDE 5.903 kb), bacillibactin(dhbABCEF, 11.774 kb) and fengycin(ppsABCDE, 37.799 kb) have high homolgous to fuction confirmed biosynthesis gene in other strain. Moreover, there are many of key regulatory genes for secondary metabolites from XF-1, such as comABPQKX Z, degQ, sfp, yczE, degU, ycxABCD and ywfG. were also predicted. Therefore, XF-1 has potential of biosynthesis for secondary metabolites surfactin, fengycin, bacillibactin, bacilysin and Bacillaene. Thirty two compounds were detected from cell extracts of XF-1 by MALDI-TOF-MS, including one Macrolactin (m/z 441.06), two fusaricidin (m/z 850.493 and 968.515), one circulocin (m/z 852.509), nine surfactin (m/z 1044.656~1102.652), five iturin (m/z 1096.631~1150.57) and forty fengycin (m/z 1449.79~1543.805). The top three compositions types (contening 56.67% of total extract) are surfactin, iturin and fengycin, in which the most abundant is the surfactin type composition 30.37% of total extract and in second place is the fengycin with 23.28% content with rich diversity of chemical structure, and the smallest one is the iturin with 3.02% content. Moreover, the same main compositions were detected in Bacillus sp.355 which is also a good effects biocontol bacterial for controlling the clubroot of crucifer. Wherefore those compounds surfactin, iturin and fengycin maybe the main active compositions of XF-1 against P. brassicae. Twenty one fengycin type compounds were evaluate by LC-ESI-MS/MS with antifungal activities, including fengycin A $C_{16{\sim}C19}$, fengycin B $C_{14{\sim}C17}$, fengycin C $C_{15{\sim}C18}$, fengycin D $C_{15{\sim}C18}$ and fengycin S $C_{15{\sim}C18}$. Furthermore, one novel compound was identified as Dehydroxyfengycin $C_{17}$ according its MS, 1D and 2D NMR spectral data, which molecular weight is 1488.8480 Da and formula $C_{75}H_{116}N_{12}O_{19}$. The fengycin type compounds (FTCPs $250{\mu}g/mL$) were used to treat the resting spores of P. brassicae ($10^7/mL$) by detecting leakage of the cytoplasm components and cell destruction. After 12 h treatment, the absorbencies at 260 nm (A260) and at 280 nm (A280) increased gradually to approaching the maximum of absorbance, accompanying the collapse of P. brassicae resting spores, and nearly no complete cells were observed at 24 h treatment. The results suggested that the cells could be lyzed by the FTCPs of XF-1, and the diversity of FTCPs was mainly attributed to a mechanism of clubroot disease biocontrol. In the five selected medium MOLP, PSA, LB, Landy and LD, the most suitable for growth of strain medium is MOLP, and the least for strains longevity is the Landy sucrose medium. However, the lipopeptide highest yield is in Landy sucrose medium. The lipopeptides in five medium were analyzed with HPLC, and the results showed that lipopeptides component were same, while their contents from B. subtilis XF-1 fermented in five medium were different. We found that it is the lipopeptides content but ingredients of XF-1 could be impacted by medium and lacking of nutrition seems promoting lipopeptides secretion from XF-1. The volatile components with inhibition fungal Cylindrocarpon spp. activity which were collect in sealed vesel were detected with metheds of HS-SPME-GC-MS in eight biocontrol Bacillus species and four positive mutant strains of XF-1 mutagenized with chemical mutagens, respectively. They have same main volatile components including pyrazine, aldehydes, oxazolidinone and sulfide which are composed of 91.62% in XF-1, in which, the most abundant is the pyrazine type composition with 47.03%, and in second place is the aldehydes with 23.84%, and the third place is oxazolidinone with 15.68%, and the smallest ones is the sulfide with 5.07%.

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