• Title/Summary/Keyword: False Positives

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Rapid and Sensitive Detection of Hepatitis C Virus in Clinical Blood Samples Using Reverse Transcriptase Polymerase Spiral Reaction

  • Sun, Wenying;Du, Ying;Li, Xingku;Du, Bo
    • Journal of Microbiology and Biotechnology
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    • v.30 no.3
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    • pp.459-468
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    • 2020
  • This study established a new polymerase spiral reaction (PSR) that combines with reverse transcription reactions for HCV detection targeting 5'UTR gene. To avoid cross-contamination of aerosols, an isothermal amplification tube (IAT), as a separate containment control, was used to judge the result. After optimizing the RT-PSR reaction system, its effectiveness and specificity were tested against 15 different virus strains which included 8 that were HCV positive and 7 as non-HCV controls. The results showed that the RT-PSR assay effectively detected all 8 HCV strains, and no false positives were found among the 7 non-HCV strains. The detection limit of our RT-PSR assay is comparable to the real-time RT-PCR, but is more sensitive than the RT-LAMP. The established RT-PSR assay was further evaluated for detection of HCV in clinical blood samples, and the resulting 80.25% detection rate demonstrated better or similar effectiveness compared to the RT-LAMP (79.63%) and real-time RT-PCR (80.25%). Overall, the results showed that the RT-PSR assay offers high specificity and sensitivity for HCV detection with great potential for screening HCV in clinical blood samples.

Differentially Expressed Genes in Porcine Parthenogenetic 2-cell and Blastocyst Embryos

  • Lee, Hwa-young;Kim, Bong-Ki;Cui, Xiang-Chun;Hwang, Kyu-Chan;Chung, Hak-Jae;Ko, Yeoung-Gyu;Jung, Jin-Kwan;Chang, Won-Kyong;Kim, N. H.
    • Proceedings of the KSAR Conference
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    • 2004.06a
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    • pp.198-198
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    • 2004
  • The identification of embryo-specific genes would provide insights into early embryonic development. However, the current methods employed to identify the genes that are expressed at a specific developmental stage are labor intensive and suffer from high rates of false positives. Here we employed a new and accurate reverse transcription-polymerase chain reaction (RT-PCR) technology that involves annealing control primers(ACPs) to identify the genes that are specifically expressed in porcine blastocysts compared to 2-cell stage embryos. (omitted)

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Memory Leak Detection Using Adaptive Cyclic Memory Allocation (동적 순환 메모리 할당 기법을 이용한 메모리 누수 검출)

  • Lim, Woo-Sup;Han, Hwan-Soo;Lee, Sang-Won
    • Journal of KIISE:Software and Applications
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    • v.37 no.10
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    • pp.760-767
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    • 2010
  • There are many memory leak detection tools. However, programmers, who develop very large programs, tend to avoid testing their programs with memory leak detection tools since these tools require runtime and space overheads. Thus, we present a memory leak detection technique which enables programmers to test their modules in their unit test phase with low overheads. To achieve this goal, we extend the existing cyclic memory allocation technique and evaluate our memory leak detection technique on a tiny DBMS. In our experiments, we find our tool has reasonably low runtime and space overheads and it reports only a small number of false positives.

A Study on Vulnerability Analysis Techniques for Secure Weapon System Software (안전한 무기체계 소프트웨어를 위한 취약점 분석 기법에 관한 연구)

  • Kim, Jong-Bok;Jo, In-June
    • The Journal of the Korea Contents Association
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    • v.18 no.8
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    • pp.459-468
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    • 2018
  • Cyberattacks on information systems used by applications related to weapon system and organizations associated with national defense put national security at risk. To reduce these threats, continuous efforts such as applying secure coding from the development stage or managing detected vulnerabilities systematically are being made. It also analyzes and detects vulnerabilities by using various analysis tools, eliminates at the development stage, and removes from developed applications. However, vulnerability analysis tools cause problems such as undetected, false positives, and overdetected, making accurate vulnerability detection difficult. In this paper, we propose a new vulnerability detection method to solve these problems, which can assess the risk of certain applications and create and manage secured application with this data.

Detection of Faces Located at a Long Range with Low-resolution Input Images for Mobile Robots (모바일 로봇을 위한 저해상도 영상에서의 원거리 얼굴 검출)

  • Kim, Do-Hyung;Yun, Woo-Han;Cho, Young-Jo;Lee, Jae-Jeon
    • The Journal of Korea Robotics Society
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    • v.4 no.4
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    • pp.257-264
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    • 2009
  • This paper proposes a novel face detection method that finds tiny faces located at a long range even with low-resolution input images captured by a mobile robot. The proposed approach can locate extremely small-sized face regions of $12{\times}12$ pixels. We solve a tiny face detection problem by organizing a system that consists of multiple detectors including a mean-shift color tracker, short- and long-rage face detectors, and an omega shape detector. The proposed method adopts the long-range face detector that is well trained enough to detect tiny faces at a long range, and limiting its operation to only within a search region that is automatically determined by the mean-shift color tracker and the omega shape detector. By focusing on limiting the face search region as much as possible, the proposed method can accurately detect tiny faces at a long distance even with a low-resolution image, and decrease false positives sharply. According to the experimental results on realistic databases, the performance of the proposed approach is at a sufficiently practical level for various robot applications such as face recognition of non-cooperative users, human-following, and gesture recognition for long-range interaction.

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The survey of Trichinella spiralis infection in finishing pigs using the pepsin-digestion method and ELISA in Korea (조직인공소화법과 ELISA를 이용한 국내 출하돈의 선모충(Trichinella spiralis) 감염실태 조사)

  • Seo, Hunsu;Woo, Gye-Hyeong;Youn, Hee-Jeong
    • Korean Journal of Veterinary Research
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    • v.44 no.2
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    • pp.269-277
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    • 2004
  • Trichinella spiralis is one of the important zoonotic parasites with a wide variety of vertebrates hosts in nature. The purpose of this study were to analyze ESP(Excretory-Secretory Protein) antigen, to evaluate ELISA for the serological diagnosis of Trichinosis, and to survey T. spiralis infection in finishing pigs using the pepsin digestion method and ELISA in Korea. In the analysis of ESP antigen by SDS-PAGE and Western blot, 4 major bands (70, 55, 52.6, and 49 kDa) were revealed from the ESP antigen. Predilection sites of T. spiralis were the diaphragm, the tongue, masseter muscles, intercostal muscle, and hindlimb in orders in the experimentally infected rats. Sera from 581 swine were tested by ELISA with ESP antigen. The 54 (9.3%) sera were suspected as positive reactors, however, these 54 sera were determined as false positives by the use of Western blotting. This study demonstrated that the ELISA was not suitable for the examination of T. spiralis in pork. The diaphragm muscle samples of 251 finishing pigs were tested by the method of pepsin-digestion for the presence of Trichinella larvae, however, T. spiralis was not detected from the samples. We could not find out T. spiralis infection in pig in Korea pork.

Updates on the Diagnosis of Helicobacter pylori Infection in Children: What Are the Differences between Adults and Children?

  • Yang, Hye Ran
    • Pediatric Gastroenterology, Hepatology & Nutrition
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    • v.19 no.2
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    • pp.96-103
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    • 2016
  • Helicobacter pylori infection is acquired mainly during childhood and causes various diseases such as gastritis, peptic ulcer disease, mucosa-associated lymphoid tissue (MALT) lymphoma, and iron deficiency anemia. Although H. pylori infection in children differs from adults in many ways, this is often overlooked in clinical practice. Unlike adults, nodular gastritis may be a pathognomonic endoscopic finding of childhood H. pylori infection. Histopathological findings of gastric tissues are also different in children due to predominance of lymphocytes and plasma cells and the formation of gastric MALT. Although endoscopy is recommended for the initial diagnosis of H. pylori infection, several non-invasive diagnostic tests such as the urea breath test (UBT) and the H. pylori stool antigen test (HpSA) are available and well validated even in children. According to recent data, both the $^{13}C$-UBT and HpSA using enzyme-linked immunosorbent assay are reliable non-invasive tests to determine H. pylori status after eradication therapy, although children younger than 6 years are known to have high false positives. When invasive or noninvasive tests are applied to children to detect H. pylori infection, it should be noted that there are differences between children and adults in diagnosing H. pylori infection.

A Study on the User Centered Interface Design to an Information Retrieval System (사용자 중심적 인터페이스 설계에 관한 연구)

  • 유재옥
    • Journal of the Korean BIBLIA Society for library and Information Science
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    • v.12 no.1
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    • pp.137-155
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    • 2001
  • This study focuses on the user centered interface design of an information retrieval system. Users do not tend to take advantage of powerful retrieval functions of an information retrieval system unless its interface is user friendly and easy to use. The actual interface design case of the ELSA information retrieval system is reviewed in terms of design concepts and its applicable concrete designs for constructing an user centered interface.

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A Study on Preprocessing Method for Effective Semantic-based Similarity Measures using Approximate Matching Algorithm (의미적 유사성의 효과적 탐지를 위한 데이터 전처리 연구)

  • Kang, Hari;Jeong, Doowon;Lee, Sangjin
    • Journal of the Korea Institute of Information Security & Cryptology
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    • v.25 no.3
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    • pp.595-602
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    • 2015
  • One of the challenges of the digital forensics is how to handle certain amounts of data efficiently. Although reliable and various approximate matching algorithms have been presented to quickly identify similarities between digital objects, its practical effectiveness to identify the semantic similarity is low because of frequent false positives. To solve this problem, we suggest adding a pre-processing of the approximate matching target dataset to increase matching accuracy while maintaining the reliability of the approximate matching algorithm. To verify the effectiveness, we experimented with two datasets of eml and hwp using sdhash in order to identify the semantic similarity.

Shot Transition Detection by Compensating Camera Operations (카메라의 동작을 보정한 장면전환 검출)

  • Jang Seok-Woo;Choi Hyung-Il
    • The KIPS Transactions:PartB
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    • v.12B no.4 s.100
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    • pp.403-412
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    • 2005
  • In this paper, we propose an effective method for detecting and classifying shot transitions in video sequences. The proposed method detects and classifies shot transitions including cuts, fades and dissolves by compensating camera operations in video sequences, so that our method prevents false positives resulting from camera operations. Also, our method eliminates local moving objects in the process of compensating camera operations, so that our method prevents errors resulting from moving objects. In the experiments, we show that our shot transition approach can work as a promising solution by comparing the proposed method with previously known methods in terms of performance.