• 제목/요약/키워드: FPP assay

검색결과 3건 처리시간 0.016초

Type I 소포체 목표화 막단백질에 속하는 새로운 C4orf32 막단백질의 동정 (Identification of C4orf32 as a Novel Type I Endoplasmic Reticulum Resident Membrane Protein)

  • 이승환;박상원;이진아;장덕진
    • 생명과학회지
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    • 제29권9호
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    • pp.949-954
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    • 2019
  • 세포막 단백질의 topology는 막단백질의 중요한 특징이다. 우리는 이전에 C4orf32단백질을 클로닝 하였으나, 이 단백질의 세포내 위치나 topology는 알지 못했다. 이번 연구를 통해 C4orf32는 세포내에서 소포체에 위치되는 막단백질임을 알게 되었다. C4orf32의 topology를 알기 위해 protease protection assay, fluorescence protease protection (FPP) assay, FRB/rapamycin/FKBP system을 활용하였다. Protease protection assay와 FPP assay를 적용한 결과 C-말단에 GFP를 붙인 C4orf32-GFP의 경우 GFP가 소포체의 세포질 표면에 위치함을 확인할 수 있었다. 또한, FRB/rapamycin/FKBP시스템을 이용한 실험에서 rapamycin이 처리되지 않은 경우는 mRFP-FKBP가 세포질에 위치하다가 rapamycin이 처리되면 C4orf32-GFP-FR가 위치하는 소포체로 이동함을 확인할 수 있었다. 이러한 사실은 C4orf32의 C-말단이 소포체의 세포질쪽 면에 위치한다는 사실을 말해준다. 이러한 연구를 통해 C4orf32는 Type I 소포체 막단백질에 속한다는 사실을 확인할 수 있었다.

Electrospray-Mass Spectrometric Analysis of Plasma Pyrophosphates Separated on a Multi-Modal Liquid Chromatographic Column

  • Lee, Su-Hyeon;Lee, Jeong-Ae;Lee, Won-Yong;Chung, Bong-Chul;Choi, Man-Ho
    • Mass Spectrometry Letters
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    • 제2권4호
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    • pp.92-95
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    • 2011
  • Pyrophosphates are the key intermediates in the biosynthesis of isoprenoids, and their concentrations could reveal the benefits of statins in cardiovascular diseases. Quantitative analysis of five pyrophosphates, including isopentenyl pyrophosphate (IPP), dimethylallyl pyrophosphate (DMAPP), geranyl pyrophosphate (GPP), farnesyl pyrophosphate (FPP), and geranylgeranyl pyrophosphate (GGPP), was performed using liquid chromatography-tandem mass spectrometry (LC-MS/MS) in negative ionization mode. After dilution with methanol, samples were separated on a 3 ${\mu}m$ particle multi-modal $C_{18}$ column ($50{\times}2$ mm) and quantified within 10 min. The gradient elution consists of 10 mM ammonium bicarbonate and 0.5% triethylamine (TEA) in water and 0.1% TEA in 80% acetonitrile was used at the flow rate of 0.4 mL/min. Overall recoveries were 51.4-106.6%, while the limit of quantification was 0.05 ${\mu}g$/mL for GPP and FPP and 0.1 ${\mu}g$/mL for IPP, DMAPP, and GGPP. The precision (% CV) and accuracy (% bias) of the assay were 1.9-12.3% and 89.6-111.8%, respectively, in 0.05-10 ${\mu}g$/mL calibration ranges ($R^2$ > 0.993). The devised LC-MS/MS technique with the multi-modal $C_{18}$ column can be used to estimate the biological activity of pyrophosphates in plasma and may be applicable to cardiovascular events with cholesterol metabolism as well as the drug efficacy of statins.

Propenone 유도체의 $NF-{\kappa}B$ 활성 억제 및 IL-8 유도에 의한 단핵구의 장 상피세포 부착 억제 효과 (Inhibitory Effects of Propenone Derivatives on $NF-{\kappa}B$ activity and IL-8-Induced Monocyte Adhesion to Colon Epithelial Cells)

  • 박수영;김경진;이종숙;이응석;김정애
    • 약학회지
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    • 제52권1호
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    • pp.62-66
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    • 2008
  • In this study, we examined the inhibitory effects of propenone derivatives, 1,3-diphenyl-propenone (DPhP), 3-phenyl-1-thiophen-2-yl-propenone (PhT2P), 3-phenyl-1-thiophen-3-yl-propenone (PhT3P) and 1-furan-2-yl-3-phenyl-propenone (FPhP), on $TNF-{\alpha}$-induced nuclear factor (NF)-${\kappa}B$ activity and interleukin (IL)-8-induced monocyte adhesion to colon epithelial cells. 1-Furan-2-yl-3-pyridin-2-yl-propenone (FPP-3) that is previously reported as a $NF-{\kappa}B$ inhibitor suppressed $TNF-{\alpha}$-induced monocyte-epithelial cell adhesion in a concentration-dependent manner. The propenone derivatives, DPhP, PhT2P, PhT3P, FPhP, also inhibited $TNF-{\alpha}$-induced $NF-{\kappa}B$ activation in a similar degree to FPP-3. In a DPPH radical scavenging assay, none of the compounds showed DPPH radical scavenging activity, indicating that the inhibitory actions of the propenone derivatives on redox-sensitive $NF-{\kappa}B$ activity is not due to a simple free radical scavenging activity. In addition, the propenone derivatives also suppressed the IL-8-induced monocyte adhesion to colon epithelial cells. Furthermore, the effective concentrations of the propenone derivatives on both $NF-{\kappa}B$ activation as well as IL-8 induced monocyte-epithelial cell adhesion were 1000 times lower than 5-aminosalicylic acid (5-ASA), a clinically used drug for inflammatory bowel disease. These results suggest that the propenone derivatives may be a potential lead having a strong inhibitory activity against inflammatory cytokine-induced epithelial inflammation.