• 제목/요약/키워드: F2 population

검색결과 762건 처리시간 0.029초

Identification of Quantitative Trait Loci Associated with Seed Size and Weight in Soybean

  • Kim, Hong-Sik;Lee, Suk-Ha;Park, Keum-Yong;Lee, Yeong-Ho
    • 한국작물학회지
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    • 제45권4호
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    • pp.227-231
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    • 2000
  • Small seed size is one of the major traits of soybean cultivars for sprouts with regard to high sprout yield. This study was conducted to identify quantitative trait loci (QTL) for seed size and weight in a set of F 6 seeds of 89 lines derived from a cross between 'Pureunkong', a soybean cultivar developed for sprouts and 'Jinpumkong 2', a soybean cultivar with no beany taste in seed due to the lack of lipoxygenases. The genetic map of 25 linkage groups with a total of 98 markers including RFLP, RAPD, SSR and classical markers was constructed from this F/sbu 5/-derived population and was used for QTL analysis. 'Pureunkong' was significantly smaller (P<0.01) than 'Jinpumkong 2' in seed size and seed weight. Genetic variation was detected and transgressive segregation was common in the population for these traits. Seven DNA markers including opT14-1600 in LG A2, opF02-400 in LG B2, Satt100, opC09-700, opG04-730 and opQll-650 in LG C2, and opY07-1100 & 1000 in LG(unknown) were significantly associated and accounted for 4.7 to 10.9% and 5.1 to 10.1 % of the phenotypic variation in seed size and seed weight, respectively. 'Pureunkong' alleles increased seed size and seed weight at the all four significant marker loci on the LG C2. These marker loci in LG C2 were closely linked and were presumed to be a single QTL. Overall, at least three independent QTLs from 3 linkage groups (A2, B2, and C2) were putatively involved in the control of seed size and seed weight.

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SNP 마커를 이용한 벼 흰잎마름병 저항성 선발 효율 증진 (Improvement of Selection Efficiency for Bacterial Blight Resistance Using SNP Marker in Rice)

  • 신운철;백소현;서춘순;강현중;김정곤;신문식;이강섭;한장호;김현순
    • Journal of Plant Biotechnology
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    • 제33권4호
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    • pp.309-313
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    • 2006
  • 본 연구는 흰잎마름병 K1 레이스에 감수성인 상주찰벼와 저항성인 HR13721-53-3-1-3-3-2-2를 인공교배하여 육성된 F2, F3를 재료로 하천 Kl 레이스에 대한 저항성 검정과 SNP 마커를 이용한 유전자형 분석 및 저항성과의 연관성을 분석하였다. Kl 레이스에 대한 저항성 검정 결과 $F_2,\;F_3$에서 각각 이론적 분리비인 3:1, 1:1의 분리비를 나타냈으며 SNP 마커를 이용한 유전자형 분석은 16PFXa1 primer를 이용하여 유전자를 증폭한 후 Eco RV 제한효소 처리하여 다형성을 분석하여 저항성 및 유전자형을 확인할 수 있었다. K1 레이스에 대한 저항성 검정과SNP마커를 이용한 유전자형의 연관분석 결과 저항성과 마커간에 연관성이 일치하였으며, 특히 SNP 마커를 이용한 유전자형 분석에서는 K1 레이스에 대한 저항성 검정에서 알 수 없었던 $F_2$ 개체가 동형접합체인지 이형접합체인지를 판별할 수 있어 저항성 품종 육종을 위한 선발 효율을 높일 수 있었다.

Genetic Mapping of Resistant Genes in Brassica pekinensis Against Plasmodiophora brassicae Race 6

  • Lee, Gung-Pyo;Baek, Nam-Kwon;Park, Kuen-Woo
    • The Plant Pathology Journal
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    • 제18권5호
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    • pp.266-270
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    • 2002
  • Inbred lines of Chinese cabbage KU-101 (resistant line against Plasmodiophora brassicae race race 6) and CS-113 (susceptible line) were crossed and their progeny lines F$_1$, BC$_1$F$_1$, F$_2$, and F$_3$ were produced for the construction of the genetic linkage map of R brassicae race 6-resistant Brassica campestris ssp. pekinensis genome. Restriction fragment length polymorphism (RFLP) was applied to compare between parents and their f$_2$ progenies with a total of 192 probes and 5 restriction enzymes. The constructed RFLP map covered 1,104 cM with a mean distance between genetic marker of 8.0 cM, and produced 10 linkage groups having 121 genetic loci. The loci of P. brassicae race 6 (CR6)-resistant Brassica genome were determined by interval mapping of quan-titative trait loci (QTL), which resulted from bioassay using the same race of the fungi in P3 population. Resistant loci were estimated in numbers 1 (Gl) and 3 (G3) linkage groups. In the regression test, Gl had a value of4.8 logarithm of odd (LOD) score, while C3 had values of 4.2-7.2. Given these results, the location of the CR6-resistant loci within the Brassica genome map can now be addressed.

Genetic Variation and Population Structure of Alder (Alnus hirsuta : Betulaceae) in Korea

  • Park, Joo-Soo;Huh, Man-Kyu
    • Journal of Life Science
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    • 제10권1호
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    • pp.14-19
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    • 2000
  • Variation at 25 allozyme loci in Korean wateralder (Alnus hirsuta Rupr.) from nine distinct populations was measured to estimate the amount and pattern of genetic diversity and population structure. The mean genetic diversity within population was 0.166. Korean alder populations have slightly high levels of genetic diversity compared to those present in associated temperature-zone species and two Canadian alder species. Among population s genetic differentiation accounted for an significant 9% of the total variation. High gene flow(Nm=2.63) was observed. Analysis of fixation indices, calculated for all polymorphic loci in each population, showed a substantial deficiency of heterozygotes relative to Hardy-Weinberg expectations. The mean GST value A. hirsuta in Korea (GST = 0.087) is similar to those of A. rogosa in Canada (GST = 0.052). These low values of GST in two countries. reflecting little spatial genetic differentiation, may indicate extensive gene flow (via pollen and/or seeds) and/or recent colonization. These factors reduce the effect of geographic isolation of breeding and the chance for genetic divergence. A pattern of increasing is observed with increasing rainfall per year. Regression analysis indicates that 54% (F = 4.67) of the variability observed can be explained by this relationship.

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What do star clusters in Stephan's Quintet tell us?

  • Sohn, Ju-Bee;Lim, Sung-Soon;Lee, Myung-Gyoon
    • 천문학회보
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    • 제35권2호
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    • pp.28.2-28.2
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    • 2010
  • We investigate star clusters in the Stephan's Quintet using Wide Field Camera 3 of the Hubble Space Telescope and three filters (F438W, F606W, F814W). Stephan's Quintet located at ~ 85 Mpc, so most star clusters are seen like point source even in HST image. We perform the Point Spread Funtion fitting photometry to find star clusters. Then we have selected 749 star cluster candidates by visual inspection. Usinng simple steallr population models (Bruzual & Charlot, 2003), we estimate ages of these star clusters. Many young star clusters found in tidal features of NGC 7318 and NGC 7319. Also star clusters in the shocked region of NGC7318 have younger age than those in NGC 7319 tidal tail. These result implies interaction which distrupt NGC 7319 first, and collision between NGC 7318 A/B occurred. In contrast, old star clusters are mainly located in NGC 7317 and in the center of other galaxies. Implications of these result will be discussed.

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한국 노인의 주관적 구강건강평가와 삶의 질 관련성 연구 (Association between Perceived Oral Health and Quality of Life in Korea Older Population)

  • 홍승연
    • 한국콘텐츠학회논문지
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    • 제19권4호
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    • pp.129-137
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    • 2019
  • 본 연구는 한국 노인의 주관적 구강평가와 일반건강평가, 삶의 질의 관련성 연구를 위하여 국민건강영양조사 제 7기 1차년도 자료 중 60세 이상 노인 1,866명(69.5세)의 자료를 SPSS 23.0으로 위계적 로지스틱 회귀분석하였다. 대상자의 87.7%가 구강상태를 보통 이하로 인식하였으며, 여성, 낮은 교육수준 일 경우 구강상태를 부정적으로 평가하였다(p<.05). 일반건강평가가 긍정적일수록 구강평가도 긍정적이었으며(F=19.04, p<.001), 공변량 통제 후 로지스틱 회귀분석에서 일반건강평가가 부정적일수록(OR: 2.86, 95% CI: 1.5-5.5), 영구치 우식이 있을수록(OR: 2.68, 95% CI: 1.67-4.32), 우울 문제가 있을수록(OR: 1.45, 95% CI: 1.42-2.57) 구강평가는 부정적이었다. 따라서, 고령자의 주관적 구강평가와 일반건강평가, 삶의 질 사이에는 유의한 관계가 있으므로 삶의 질 향상을 위하여 통합적 정책이 이루어져야 할 것으로 사료된다.

한국 식품중의 유독성 진균에 관한 연구 8 (Studies on the Population of Toxigenic Fungi in Foodstuffs(VIII))

  • 고춘명;김세종;조세훈;김성광;류준
    • 미생물학회지
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    • 제12권2호
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    • pp.59-68
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    • 1974
  • With an aim to disclose causal factors scably grains intoxications, the screening of toxic Fusaria and the detection of toxic priniciples were performed in respect of cultured cells bioassay with HeLa cells, skin-necrotizing effect, histopathological investigation and also chromatographic analysis sith following results ; 1. Among the fungi, Fusarium sp. F-27, F-63 and F-61 were highly toxic to mice, causing liver injury characterized necrosis and inflammation. 2. HeLa cell culture bioassay demonstrated that the cell of the isolated strains of Fusaria were suspected to produce toxic material (Fusarenon-X). 3. The culture filtrates of Fusarium nivale Fn-2B, F-27, and F-63, were injected subcutaneously, and caused inflammation followed by crust on the skin ICR-mice. 4. The observation method of skin-necrotizing effect to the mice can be used to the screening to the toxin-producing fungi isolated from many fusarial contaminations.

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Effects of CSN1S2 Genotypes on Economic Traits in Chinese Dairy Goats

  • Yue, X.P.;Fang, Q.;Zhang, X.;Mao, C.C.;Lan, X.Y.;Chen, H.;Lei, Chuzhao
    • Asian-Australasian Journal of Animal Sciences
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    • 제26권7호
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    • pp.911-915
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    • 2013
  • The aim of this study was to investigate allele frequencies at the CSN1S2 locus in two Chinese dairy goat breeds and the effects of its variation on dairy goat economic traits. Seven hundred and eight goats from Xinong Saanen (XS, n = 268) and Guanzhong (GZ, N = 440) breeds were selected. The milk samples of 268 XS goats were collected during the middle of lactation, body size parameters (708 goats) and daily milk yield (202 goats) were registered. The RFLP (restriction fragment length polymorphism) and SSCP (single strand conformation polymorphism) were used to detect the polymorphisms in CSN1S2. The Hardy-Weinberg (HW) equilibrium and the associations between body size, milk yield and composition and the genotypes were calculated. The results revealed that only A and F CSN1S2 alleles were found in the two Chinese dairy goat breeds. Allelic frequencies of A and F were 0.795, 0.205 and 0.739, 0.261 in Xinong Saanen and Guanzhong population respectively. Xinong Saanen breed was in Hardy-Weinberg equilibrium, while Guanzhong breed deviated from Hardy-Weinberg equilibrium (p<0.05). The association of polymorphism with economic traits indicated that the goats with FF genotype have higher milk fat and total solid concentration than those with AA and AF genotypes (p<0.05).

서해 중부 해역에 출현하는 미끈망둑, Luciogobius guttatus (Gobiidae)의 생식생태와 개체군 동태 (Reproductive Biology and Population Dynamics of Luciogobius guttatus (Pisces: Gobiidae) in the Southwestern of Korea)

  • 김병기;김지혜;한경남
    • 한국어류학회지
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    • 제27권3호
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    • pp.217-227
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    • 2015
  • 미끈망둑의 생식생태와 개체군 동태를 조사하였다. GSI값은 3월부터 5월까지 높게 나타났다. 포란수는 3.1~4.0 cm (SL)에서 241개, 5.1~5.7 cm (SL)에서 716개의 범위를 보였다. 체장과 포란수의 관계식은 $F=11.242SL^{2.464}$ ($R^2=0.65$)이고, 포란수는 크기와 함께 증가하였다. 50% 군성숙체장은 2.6 cm로 나타났다. 산란기는 4~5월이었다. 성장 매개변수의 추정은 von Bertalanffy growth function (VBGF) 모델을 이용하였다 ($L_{\infty}=63.00mm$ TL, $K=0.85yr^{-1}$). 가입유형은 1년에 1회로 나타났다. 성장 비교지수 (${\phi}$)는 3.53으로 나타났다. 자연사망계수 (M)는 $1.00yr^{-1}$로 추정되었다.

Determination of HLA-A*02 Alleles Using Nested PCR-SSP in Korean Population

  • Lee, Kyung-Ok;Heo, Jeong-Ho-Ho;Kim, Hye-Jin;Lee, Eun-Mi;Hong, Sung-Hoi;Kim, Yoon-Jung
    • Animal cells and systems
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    • 제1권1호
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    • pp.129-134
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    • 1997
  • HLA-A2 is one of the most diversified HLA-class I antigen with 17 subtypes so far identified at the molecular level. HLA-A*02 subtyping has significant implications on the tissue typing for organ and bone marrow transplantations. Recently, DNA-based typing methods have been successfully applied to the elucidation of HLA gene polymorphisms. In the present study, HLA-A*O2 genotyping was established by using nested polymerase chain reaction-sequence specific primers (PCR-SSP) and distribution of A*O2 alleles were determined in Korean individuals. Genomic DNA prepared from four B-lymphoblastoid cell lines and lymphocytes from serologically defined 48 HLA-A2 Korean individuals by phenol/chloroform extractions was typed. The results of the four B-lymphoblastoid cells were consistent with the previous data typed by PCR analysis. Five A*O2 alleles-A*0201, A*0203, A*0206, A*0207 and A*0210-were commonly observed in a total of 17 A*02 alleles. Of these, A*0207 (f=49.0%) was the most frequent allele in Korean population. A*0206 (f=28.3%) and A*0201 (f=17.0%) were also found frequently while A*0203 and A*0210 types were observed in less than 5%. In conclusion, the high level of discrimination for HLA-A*O2 alleles will prove useful and informative in the study of transplant survival, and may identify the importance of allelic differences not readily detectable by serology on host and donor compatibility.

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