• Title/Summary/Keyword: Et$_3$B

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Characterization of AprE176, a Fibrinolytic Enzyme from Bacillus subtilis HK176

  • Jeong, Seon-Ju;Heo, Kyeong;Park, Ji Yeong;Lee, Kang Wook;Park, Jae-Yong;Joo, Sang Hoon;Kim, Jeong Hwan
    • Journal of Microbiology and Biotechnology
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    • v.25 no.1
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    • pp.89-97
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    • 2015
  • Bacillus subtilis HK176 with high fibrinolytic activity was isolated from cheonggukjang, a Korean fermented soyfood. A gene, aprE176, encoding the major fibrinolytic enzyme was cloned from B. subtilis HK176 and overexpressed in E. coli BL21(DE3) using plasmid pET26b(+). The specific activity of purified AprE176 was 216.8 ± 5.4 plasmin unit/mg protein and the optimum pH and temperature were pH 8.0 and 40℃, respectively. Error-prone PCR was performed for aprE176, and the PCR products were introduced into E. coli BL21(DE3) after ligation with pET26b(+). Mutants showing enhanced fibrinolytic activities were screened first using skim-milk plates and then fibrin plates. Among the mutants, M179 showed the highest activity on a fibrin plate and it had one amino acid substitution (A176T). The specific activity of M179 was 2.2-fold higher than that of the wild-type enzyme, but the catalytic efficiency (kcat/Km) of M179 was not different from the wild-type enzyme owing to reduced substrate affinity. Interestingly, M179 showed increased thermostability. M179 retained 36% of activity after 5 h at 45℃, whereas AprE176 retained only 11%. Molecular modeling analysis suggested that the 176th residue of M179, threonine, was located near the cation-binding site compared with the wild type. This probably caused tight binding of M179 with Ca2+, whichincreased the thermostability of M179.

Structure, Modified Scaled Quantum Mechanical Force Field and A Priori Prediction of Vibrational Spectra and Their Assignment and Exponential Scaling of Frequencies of Triphenylene

  • Bandyopadhyay, Indrajit
    • Bulletin of the Korean Chemical Society
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    • v.24 no.6
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    • pp.717-722
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    • 2003
  • The structure, force field and vibrational spectra of triphenylene are studied by $B3LYP/6-31G^*$(5d) level of theory. The results are compared to those of the related system, phenanthrene. The scale factors in nonredundant local coordinates obtained after fitting the DFT frequencies to the experimental numbers of phenanthrene-$d_0 and -d_{10}$ are transferred to predict the spectra and assignment of triphenylene for in-plane modes. The frequencies based on scaling methodology due to Lee et al. are also obtained. These frequencies are compared with the predicted numbers based on scale factors from phenanthrene. Probable assignment for out-of-plane modes is proposed based on simple scaling of Scott and Radom (scale factor 0.9614) as well as by scaling methodology by Lee et al.

Pharmacognostical Studies on Korean 'Bang Poong' (방풍(防風)의 생약학적(生藥學的) 연구(硏究))

  • Nam, Joo-Yung;Ryu, Kyung-Soo
    • Korean Journal of Pharmacognosy
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    • v.6 no.3
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    • pp.151-159
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    • 1975
  • Botanical origins of three drugs, 'Won-bangpoong,' 'Shik-bangpoong' and 'Jaezoo-bangpoong' are not certain on the present market in Korea. These three were compared with two kinds of Chinese 'bangpoong' by histology and screening tests of roots. The original plant of 'Won-bangpoong' which is domestically used is Glehnia littoralis SCHMIDT et MIQUEL 'Shik-bangpoong' Peucedanum japonicum THUNBERG and 'Jaezoo-bangpoong' Seseli coreana KITAKAWA. Chinese "bangpoong" appears to be Siler divaricatum $B_{ENTHAM}$ et Hook, being different from others. "Shik-bangpoong" is easily distinguished from others two in external morphology. Thee kinds of available "Bangpoong" are different from one another in the internal structures and in the internal structures and in the screening tests by TLC.

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2-ENGELIZER SUBGROUP OF A 2-ENGEL TRANSITIVE GROUPS

  • Moghaddam, Mohammad Reza R.;Rostamyari, Mohammad Amin
    • Bulletin of the Korean Mathematical Society
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    • v.53 no.3
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    • pp.657-665
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    • 2016
  • A general notion of ${\chi}$-transitive groups was introduced by C. Delizia et al. in [6], where ${\chi}$ is a class of groups. In [5], Ciobanu, Fine and Rosenberger studied the relationship among the notions of conjugately separated abelian, commutative transitive and fully residually ${\chi}$-groups. In this article we study the concept of 2-Engel transitive groups and among other results, its relationship with conjugately separated 2-Engel and fully residually ${\chi}$-groups are established. We also introduce the notion of 2-Engelizer of the element x in G and denote the set of all 2-Engelizers in G by $E^2(G)$. Then we construct the possible values of ${\mid}E^2(G){\mid}$.

BEST RANDOM PROXIMITY PAIR THEOREMS FOR RELATIVELY U-CONTINUOUS RANDOM OPERATORS WITH APPLICATIONS

  • Okeke, Godwin Amechi
    • East Asian mathematical journal
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    • v.33 no.3
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    • pp.271-289
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    • 2017
  • It is our purpose in this paper to introduce the concept of best random proximity pair for subsets A and B of a separable Banach space E. We prove some best random approximation and best random proximity pair theorems of certain classes of random operators, which is the stochastic verse of the deterministic results of Eldred et al. [22], Eldred et al. [18] and Eldred and Veeramani [19]. Furthermore, our results generalize and extend recent results of Okeke and Abbas [42] and Okeke and Kim [43]. Moreover, we shall apply our results to study nonlinear stochastic integral equations of the Hammerstein type.

Pharmacological Action of Machilus Thunbergii Siebold Zuccarini (한국산 생약제들의 혈압강하작용에 대한 연구 II. 한국산 후박수피의 혈압강하 작용)

  • Cho B.H.;Kim I.H.;Lee S.B.;Cho K.C.;Lee J.H.
    • The Korean Journal of Pharmacology
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    • v.15 no.1_2 s.25
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    • pp.45-56
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    • 1979
  • With a view to searching after a new antihypertensive or hypotensive agents in the botanical crude plants, authors intended to reevaluate several natural products caltivated in Korea. This experiment was undertaken to compare pharmacogical actions of Machilus thunbergii Siebold et Zuccarini with those of Magnolia obovata Thunberg in anesthetized rats and in normal mice. Machilus thunbergii Sieb. et Zucc., a tree belonging to the Lauraceae family, is caltivated at Ull-ung Do, and their cortecies have been used as folk medicine mingled with those of Magnolia obovata Thunberg. These two cortecies have teen also applied in chinese medicine, it was advocated that these cortecies exerted good therapeutic effects on gastritis, convulsive abdominal pain, nausea, vomiting and urinary tract disorders. Therefore, we intended to determine the pharmacological action of two palnt of different family each other, especially their effects on blood pressure and heart rate, and also their mechanism of action were observed. We studied their action with extracts of hexane(MTHE), ether(MTEE), methanol(MTME) and water(MTWE) from Machilus thunhergii Sieb. et Zucc., and also fractionations of methanol(MOME), chloroform(MOCE) and water(MOWE) from Mapolia obovata Thunberg. The results of this experiment were as follows; 1) MTME, when intravenously administered to rats, elicited the significant hypotensive responses dependent on the administered dosage. 2) MOWE was also exhibited the hypotensive effect dependent on the treated dose. 3) Depressor effect of MTME was blocked by pretreatment with hexamethonium. 4) The hypotensive response of MOWE was blocked by pretreatment with hexamethonium or hrdralazine. 5) HTME and MOWE were also observed the anticonvulsive effect and sedative effect. These results suggested that MTME may induce the hypotensive response via central sympathetic effect, but the site of action in brain are not clarified, and the hypotensive effect of MOWE may be due to dual mechanism of central sympathetic action and direct vasodilation of blood vessel.

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A Novel Phage Display Vector for Easy Monitoring of Expressed Proteins

  • Shin, Young-Chul;Kim, Young-Eun;Cho, Tae-Ju
    • BMB Reports
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    • v.33 no.3
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    • pp.242-248
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    • 2000
  • Phage display of proteins is a powerful tool for protein engineering since a vast library of sequences can be rapidly screened for a specific property. In this study, we develop da new phage display vector that was derived from a pET-25b(+) vector. The pET-25b(+) was modified in order that the expressed protein would have a T7-tag at the amino terminus and GpS (a major coat protein of M13 phage) at the carboxyl terminus. Another vector without the gp8 gene was also constructed. The newly developed phagemid vectors have several advantageous features. First, it is easy to examine whether or not the target proteins are functional and faithfully transported into the periplasmic space. This feature is due to the fact that recombinant proteins are produced abundantly in the pET system. Second, the T7-tag makes it possible to detect any target proteins that are displayed on the surface of filamentous bacteriophage. To verify the utility of the vector, the clones containing the glutathione S-transferase (GST) gene as a target were examined. The result showed that the GST produced from the recombinant vector was successfully transported into the periplasmic space and had the anticipated enzyme activity. Western blot analysis using a T7-tag antibody also showed the presence of the target protein displayed on the surface of the phage. The phages prepared from the recombinant clones were able to bind to glutathione-Sepharose and then eluted with glutathione. These results showed that the new vectors developed in this study are useful for the phage display of proteins.

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Wave Reflection from Partialy Perforated Caisson Breakwater (부분 유공 케이슨 방파제로부터의 파의 반사)

  • Suh, Kyung-Doug
    • Journal of Korean Society of Coastal and Ocean Engineers
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    • v.8 no.3
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    • pp.221-230
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    • 1996
  • The Suh and Park's analytical model. originally developed to calculate wave reflection from a conventional fully perforated caisson breakwater, is applied to a partially perforated caisson breakwater by approximating the vertical wall of the lower part of the front face of the caisson as a very steep sloping wall. Also, in the model, the inertial resistance term at the perforated wall is modified by using the blockage coefficient proposed by Kakuno and Liu. The model is compared against the hydraulic experimental data reported by Park et al. in 1993. Both the experimental data and the analytical model results show that the influence of inertial resistance is important so that wave reflection becomes minimum when B/L. is approximately 0.2 (in which R : wave chamber width, and 1, : wave length inside the wave chamber), which is somewhat smaller than the theoretical value B/L, : 0.25 obtained by assuming that the influence of inertial resistance is negligible. It is also shown that the analytical model based on a linear wave theory tends to overpredict the reflection coefficient as the wave nonlinearity increases, thus the model is preferably to be used for ordinary waves of small steepness.

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Genetic and Biochemical Characterization of the Biphenyl Dioxygenase from Pseudomonas sp. Strain B4

  • Rodarie, David;Jouanneau, Yves
    • Journal of Microbiology and Biotechnology
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    • v.11 no.5
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    • pp.763-771
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    • 2001
  • Biphenyl dioxygenase (BPDO), which catalyzes the first step in the bacterial degradation of biphenyl and polychlorinated biphenyls, was characterized in Pseudomonas sp. B4. The bphA locus containing the four structural genes encoding BPDO were cloned and sequenced. A regulatory gene as well as a putative regulatory sequence were identified upstream of this locus. A transposase-like gene was found within a 1-kb region further upstream, thereby suggesting that the bphA locus may be carried on a transposable element. The three components of the BPDO enzyme have been separately overexpressed and purified from E. coli. The ferredoxin and terminal dioxygenase components showed biochemical properties comparable to those of two previously characterized BPDOs, whereas the ferredoxin reductase exhibited an unusually high lability. The substrate selectivity of BPDO was examined in vivo using resting cell assays performed with mixtures of selected polychlorinated biphenyls. The results indicated that para-substituted congeners were the preferred substrates. In vitro studies were carried out on a BPDO complex where the reductase from strain B4 we replaced by the more stable isoform from Comamonas testosteroni B-356. The BPDO enzyme had a specific activity of $0.26{\pm}0.02 {\mu}mol {min^-1}{mg^-1}\;of\;ISP_{BPH}$ with biphenyl as the substrate. The 2,3-, 4,4'-, and 2,4,4'-chlorobiphenyls were converted to single dihydrodiols, while 2,4'-dichlorobiphenyl gave rise to two dihydrodiols. The current data also indicated that 2,4,4'-trichlorobiphenyl was a better substrate than the 4,4'-dichlorinated congener.

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Crystal Structure and Piezoelectric Properties of Four Component Langasite A3B Ga3Si2O14 (A = Ca or Sr, B = Ta or Nb)

  • Ohsato, Hitoshi;Iwataki, Tsuyoshi;Morikoshi, Hiroki
    • Transactions on Electrical and Electronic Materials
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    • v.13 no.4
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    • pp.171-176
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    • 2012
  • As langasite $A_3BC_3D_2O_{14}$ compounds with piezoelectric properties exhibit no phase transition up to the melting point of 1,400-$1,500^{\circ}C$, many high temperature applications are expected for the SAW filter, temperature sensor, pressure sensor, and so on, based on the digital transformation of wider bandwidth and higher-bit rates. It has a larger electromechanical coupling factor compared to quartz and also nearly the same temperature stability as quartz. The $La_3Ga_5SiO_{14}$ (LGS) crystal with the $Ca_3Ga_2Ge_4O_{14}$-type crystal structure was synthesized and the crystal structure was analyzed by Mill et al. It is also an important feature that the growth of the single crystal is easy. In the case of three-element compounds such as $[R_3]_A[Ga]_B[Ga_3]_C[GaSi]_DO_{14}$ (R=La, Pr and Nd), the piezoelectric constant increases with the ionic radius of R. In this study, crystal structures of four-element compounds such as $[A_3]_A[B]_B[Ga_3]_C[Si_2]_DO_{14}$ (A = Ca or Sr, B = Ta or Nb) are analyzed by a single crystal X-ray diffraction, and the mechanism and properties of the piezoelectricity depending on the species of cation was clarified based on the crystal structure.