• Title/Summary/Keyword: DnaB

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Random Amplified Polymorphic DNA(RAPD)를 이용한 딸기 시들음병균(Fusarium oxysporum f. sp. fragariae)의 분류 (Differentiation of Fusarium oxysporum f. sp. fragariae Isolates by Random amplified Polymorphic DNA (RAPD) Analysis.)

  • 현재욱;박원목
    • 한국식물병리학회지
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    • 제12권1호
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    • pp.41-46
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    • 1996
  • 본 실험은 이병 딸기의 조직에서 분리 동정된 시들음병균(Fusarium oxysporum f. sp. fragariae) 균주들의 유?거 변이를 random amplified polymorphic DNA(RAPD) marker들을 이용하여 조사하였다. 총 24개의 딸기 시들음병 균주들의 DNA를 주형으로 하여 16개의 random 10-mer primer들을 사용하여 증폭시킨 결과 총 231개의 marker들을 이용하여 유전적 변이를 조사해 본 결과 크게 RAPD I과 RAPD II의 2개 그룹으로 나눌 수 있었다. RAPD I그룹에 속하는 균주는 VCG A에 속하는 Y1, K1, K2, K3, K4, N2, N3, N4-1, N6-1, N6-2, N8, N9, N10, M1-2-1 균주, VCG B에 속하는 M4-1 균주 그리고 VCG C에 속하는 N1, Y2 균주들이었고, RAPD II그룹에는 VCG B에 속하는 M1-1, M2-2-1, M2-4-2, M3-2, M3-3-2 균주와 VCG D에 속하는 N1 1 균주가 속하였다. 이들 2그룹 간에는 31%의 유사성이 있었다.

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한산도에 서식하는 식물의 잎에서 분리된 5종의 국내 미기록 내생균 (First Reports of Five Endophytic Fungi Isolated from Leaves of Plants Inhabiting the Hansando Island in Korea)

  • 박혁;이종철;엄안흠
    • 한국균학회지
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    • 제48권3호
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    • pp.217-228
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    • 2020
  • 본 연구에서는 경남 통영시의 한산도에서 서식하는 식물의 잎을 채취하여 내생균을 분리하였다. 분리한 균주는 배양특성과 포자등의 형태성특성 및 rDNA의 internal transcribed spacer 영역, small subunit 및 large subunit 영역, 그리고 translation elongation factor 1-α 영역의 DNA 염기서열을 분석하여 동정하였다. 연구결과 5종의 국내 미기록 내생균 균주를 확인하였으며, 확인된 종은 Arthrinium camelliae-sinensis, Beltraniella humicola, B. portoricensis, Microxiphium theae, Piceomphale pinicola이다. 확인된 미기록 균주의 형태적 특성 및 분자생물학적 계통분석의 결과에 대해 서술하였다.

Escherichia coli K-12 방사선 감수성 균주의 오존 내성 (Ozone resistance of radiosensitive strains of escherichia coli K-12)

  • ;정영섭;최영길
    • 미생물학회지
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    • 제26권2호
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    • pp.113-121
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    • 1988
  • Ozone, an atmospheric pollutant, can damage similar UV and X-rays DNA and its components. It is possible then that the KNA damage produced by this gas are similar, to some extent, to those of radiations and that they could be repaired by the same DNA repair mechanisms. It has been observed in Escherichia coli that radiosensitive strains such as lex A, rec A and pol A, all deficient to some extent for DNA repair, are more sensitive to ozone than a wild type strain. We have thendetermined the ozone resistance and host-cell reactivation of ozone-damaged T3 phages for the E. coli double mutants pol A, lex A, uvr B, lex A, uvr A, rec A and rec A lox A. According to the results, the DNA polymerase 1 plays a key role in ozone resistance and Type 11 mechanism and/or shory patch excision repair are the most important for it. The interactions between the different DNA repair mechanisms are secondary. There is a strong correlation between ozone resistance and the capacity to reactivate T3 phages damaged by ozone.

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Enhancement of DNA Vaccine-induced Immune Responses by Influenza Virus NP Gene

  • Choi, So-Young;Suh, You-Suk;Cho, Jae-Ho;Jin, Hyun-Tak;Chang, Jun;Sung, Young-Chul
    • IMMUNE NETWORK
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    • 제9권5호
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    • pp.169-178
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    • 2009
  • DNA immunization induces B and T cell responses to various pathogens and tumors. However, these responses are known to be relatively weak and often transient. Thus, novel strategies are necessary for enhancing immune responses induced by DNA immunization. Here, we demonstrated that co-immunization of influenza virus nucleoprotein (NP) gene significantly enhances humoral and cell-mediated responses to codelivered antigens in mice. We also found that NP DNA coimmunization augments in vivo proliferation of adoptively transferred antigen-specific CD4 and CD8 T cells, which enhanced protective immunity against tumor challenge. Our results suggest that NP DNA can serve as a novel genetic adjuvant in cocktail DNA vaccination.

Encapsulation of Plasmid DNA in Pegylated Liposome

  • Jang, Jung-Ok;Gwak, Hye-Sun;Lee, Hwa-Jeong
    • Journal of Pharmaceutical Investigation
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    • 제35권5호
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    • pp.337-341
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    • 2005
  • The purpose of the study was to prepare the pegylated liposome carrying plasmid DNA with optimal encapsulation efficiency. Plasmid DNA (pCEP4 clone 790, 10.6 kb) was entrapped in the pegylated liposome composed of neutral lipid, POPC (l-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine), cationic lipid, DDAB (dimethyl dioctadecyl ammonium bromide) and anionic lipids, DSPE-PEG 2000 (distearoyl phosphatidyl ethanolamine polyethylene glycol 2000) and DSPE-PEG 2000-maleimide by freezing/thawing method. Free plasmid DNA was separated from the encapsulated one by Sepharose CL-4B column chromatography. The DNA amount encapsulated into the pegylated liposome was increased as cationic lipid concentration, initial amount of plasmid DNA and total lipid amount were increased.

자리공 항바이러스 단백질 II 유전자의 형질전환에 의한 연초의 바이러스 저항성 품종 개발 (I)

  • 강신웅;이영기;이기원;박성원;이청호
    • 한국연초학회지
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    • 제21권1호
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    • pp.57-63
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    • 1999
  • Pokeweed antiviral protein II (PAP-II) encoding cDNA was synthesized by reverse-transcriptase polymerase chain reaction (RT-PCR) from Phytolacca american a leaf. The PAP-II cDNA fragment of 974bp was subcloned to pBluescript II SK- SmaI site and the inserted PAP-II cDNA fragment was sequenced by dideoxy sequencing method. The number of nucleotides of PAP-II cDNA coding region containing start and stop codon was 933bp. To develop a virus-resistant tobacco plant, PAP-II cDNA fragment was inserted to pKGT101B and the insertion of PAP-II cDNA fragment was confirmed by restriction enzyme analysis and colony PCR.

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Characterization of dnaK Mutants in Streptococcus pneumoniae

  • Kim, Seung-Whan;Pyo, Suhk-Neung;Rhee, Dong-Kwon
    • BMB Reports
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    • 제33권1호
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    • pp.75-81
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    • 2000
  • DnaK is a major heat shock protein and known to be highly conserved in all species. Previously, the dnaK in Streptococcus pneumoniae was cloned and the immunogenic nature characterized. In this study, dnaK mutants were generated by insertion of duplication mutagenesis and their characteristics examined. They had defective growths at all temperatures ($20^{\circ}C-42^{\circ}C$)and cell divisions, and formed filaments after a temperature shift from 30 to 42. A unique feature of the dnaK mutants of S. pneumoniae, unlike those of E. coli and B. subtilis, was the growth capability at high temperature ($42^{\circ}C$) without producing the putative GroEL. Our results suggest that DnaK may serve as a regulator and/or modifier in GroEL gene expression.

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DNA염기배열에 의한 게임 배경 음악 생성방법 (Music Generation Method by DNA as a Game Background Music)

  • 박용범;황철호
    • 한국게임학회 논문지
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    • 제1권1호
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    • pp.88-93
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    • 2001
  • 디지털 미디어의 복사 용이성은 저작권 문제를 일으켰고 이로 인해 기존 음악을 게임 배경음악으로 사용하는데 어려움이 표출 되었다. 게임의 주요 요소 중 하나인 게임 배경음악을 선정하는 것은 중요한 문제이다. 본 연구는 DNA 염기배열에 의한 게임 배경 음악 생성 방법을 제시하여 게임 배경을 쉽게 생성하게 하였다. 현존 하는 DNA는 매우 많은 종류가 있으므로 여기서 얻을 수 있는 게임 배경 음악은 무한하다.

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Characterization of the Nucleotide Sequence of a Polyubiquitin Gene (PUBC1) from Arabian Camel, Camelus dromedarius

  • Al-Khedhairy, Abdulaziz Ali A.
    • BMB Reports
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    • 제37권2호
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    • pp.144-147
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    • 2004
  • Molecular amplification and sequencing of genomic DNA that encodes camel polyubiquitin (PUBC1) was performed by a polymerase chain reaction (PCR) using various sets of primers. The amplification generated a number of DNA fragments, which were sequenced and compared with the polyubiquitin coding sequences of various species. One DNA fragment that conformed to 325 bp was found to be 95 and 88% homologous to the sequences of human polyubiquitin B and C, respectively. The DNA translated into 108 amino acids that corresponded to two fused units of ubiquitin with no intervening sequence, which indicates that it is a polyubiquitin and contains at least two units of ubiquitin. Although, variations were found in the nucleotide sequence when compared to those of other species, the amino acid sequence was 100% homologous to the polyubiquitin sequences of humans, mice, and rats. This is the first report of the polyubiquitin DNA coding sequence and its corresponding amino acid sequence from camels, amplified using direct genomic DNA preparations.

NMR Study of Consensus DNA-binding Site for Arabidopsis thaliana Class I Transcription Factor AtTCP1

  • Choi, Yong-Geun;Kim, Hee-Eun;Lee, Joon-Hwa
    • 한국자기공명학회논문지
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    • 제17권2호
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    • pp.76-80
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    • 2013
  • The TCP domain is a DNA-binding domain present in plant transcription factors and has a similar structural feature to the bHTH motif of eukaryotic transcription factors. The imino proton exchange study has been performed for the DNA duplex containing the consensus DNA-binding site for the AtTCP11 transcription factor. The first two base pairs in the consensus 5'-GTGGG-3' sequence are relatively very unstable but lead to greater stabilization of the neighboring two G C base pairs. These unique dynamic features of the five base pairs in the consensus DNA sequence might play crucial roles in the effective DNA binding of the AtTCP11 protein.