• 제목/요약/키워드: Diversity methods

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Genome-Wide SSR 마커를 이용한 주요 산지별 참당귀의 유전다양성 분석 (Genetic Diversity of Angelica gigas Nakai Collected in Korea using Genome-Wide SSR Markers)

  • 정대희;박윤미;김기윤;박홍우;전권석;김만조;길진수;이이;엄유리
    • 한국약용작물학회지
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    • 제27권6호
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    • pp.376-382
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    • 2019
  • Background: Angelica gigas Nakai has been used as an herbal medicine in Eastern Asia for treating disorders in women for a long time. To date there are no studies on the genetic diversity of A. gigas. The present study aimed to study the genetic diversity of A. gigas variants using genome-wide simple sequence repeat (SSR) markers. Methods and Results: The genetic diversity of 199 variants of A. gigas cultivated in of different regions, was analyzed using 5 genome-wide SSR markers. The results revealed that the genetic variants were very diverse, and genetic analysis using the 5 SSR markers revealed high diversity among the variants. Conclusions: It is expected that the development of the true Angleical cultivar, by studying the system and group selection, can be achieved by genetic analysis using the developed markers, for generating a genetically fixed lineage and group selection.

도라지 수집종의 형태적 특성과 SSR마커에 의한 유연관계 분석 (Morphological Characteristics and Genetic Diversity Analysis of Platycodon grandiflorum (Jacq.) A. DC Determined Using SSR Markers)

  • 엄유리;이이;;이대영;이재원;김금숙;김창국;홍창표;김옥태
    • 한국약용작물학회지
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    • 제24권1호
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    • pp.55-61
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    • 2016
  • Background : Plant breeding requires the collection of genetically diverse genetic resources. Studies on the characteristics of Platycodon grandiflorum resources have not been carried out so far. The present study was carried out to discriminate P. grandiflorum based on morphological characteristics and genetic diversity using simple sequence repeat (SSR) markers. Methods and Results :We collected 11 P. grandiflorum cultivars: Maries II, Hakone double white, Hakone double blue, Fuji white, Fuji pink, Fuji blue, Astra white, Astra pink, Astra blue, Astra semi-double blue and Jangbaek. Analyses of the morphological characteristics of the collection were conducted for aerial parts (flower, stem and leaf) and underground parts (root). Next, the genetic diversity of all P. grandiflorum resources was analyzed using SSR markers employing the DNA fragment analysis method. We determined that the 11 P. grandiflorum cultivars analyzed could be classified by plant length, leaf number and root characteristic. Based on the genetic diversity analysis, these cultivars were classified into four distinct groups. Conclusions : These findings could be used for further research on cultivar development using molecular breeding techniques and for conservation of the genetic diversity of P. grandiflorum. Moreover, the markers could be used for genetic mapping of the plant and marker-assisted selection for crop breeding.

식생구조와 토양환경 분석을 통한 서식처의 생태학적 구분 -김포매립지와 그 근린 지역의 식생을 사례로 - (Ecological Division of Habitats by Analysis of Vegetation Structure and Soil Environment -A Case Study on the Vegetation in the Kimpo Landfills and Its Periphery Region-)

  • Kim, Jong-Won;Yong-Kyoo Jong
    • The Korean Journal of Ecology
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    • 제18권3호
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    • pp.307-321
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    • 1995
  • Division of ecoregions having respective functions was attempted through quantitative and qualitative analysis on vegetation diversity, and heterogeneity and on soil environment of the study sites. Field research was carried out in a square of 81 ㎢ around Andongpo (126°38'E, 37°30'N), Kimpo-gun, Kyonggi provice. Conventional methods applied are as follows: classical syntaxonomy by the Zurich-Montpellier School, interpolation method to determine the degree of diversity, heterogeneity and distribution pattern of vegetation, and correlation analysis between soil properties and plant communities. 41 plant communities were identified and composed of 6 forests, 4 mantle and 31 herb communities including 6 saltmarsh plant communities. In a mesh, number of plant communities was highly correlated to the number of species. The highest number of plant community and species was 25 communities·km-2·mesh-1 and 381 species· km-2·mesh-1 ,and the highest value of vegetation heterogeneity was 28.1 species· community-1·mesh-1. Their lowest numbers were 4 communities·km-2·mesh-1. and 28 species·km-2·mesh-1. and 7 species·community-1·mesh-1, respectively. Contour map on vegetation diversity and heterogeneity enabled us to establish two regions; coastal and inland vegetation. Isoline 〔150〕,〔10〕and〔10〕and〔15〕on the species diversity, the community diversity and the vegetation heterogeneity, respectively, were regarded as ecolines in the study area. Cl- content was recognized as the most important factor from correlation analysis between soil properties. Ordination of sites indicated that the study area be divided into two edaphic types: inland and coastal habitats. It was considered that the extent of desalinization in soil played a major role in determining the species composition in the reclamed area. By matching edaphic division of habitats with division of vegetation structures, designation of ecoregion was endorsed. The approach of current study was suggested as an effective tool to implement an assessment of the vegetation dynamics by the disparity of natural environment and anthropogenic interferences.

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The domestication event of the Tibetan pig revealed to be in the upstream region of the Yellow River based on the mtDNA D-loop

  • Ge, Qianyun;Gao, Caixia;Cai, Yuan;Jiao, Ting;Quan, Jinqiang;Guo, Yongbo;Zheng, Wangshan;Zhao, Shengguo
    • Asian-Australasian Journal of Animal Sciences
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    • 제33권4호
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    • pp.531-538
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    • 2020
  • Objective: Evidence from previous reports indicates that pig domestication in East Asia mainly occurred in the Mekong region and the middle and downstream regions of the Yangtze River. Further research identified two new origin centers for domestic pigs in the Tibetan Plateau and the islands of Southeast Asia. However, due to the small sample size of Tibetan pigs, details of the origin and spread of Tibetan pigs has not yet been established. Methods: We analyzed mitochondrial DNA control region (D-loop) variation in 1,201 individuals from nine Tibetan pig populations across five provinces. Comprehensive Tibetan pig samples were taken to perform the most detailed analysis of Tibetan pigs to date. Results: The result indicate that Rkaze pigs had the lowest level of diversity, while Changdu pigs had the highest diversity. Interestingly, these two populations were both in the Tibetan Plateau area. If we calculate diversity in terms of each province, the Tibetan Plateau area had the lowest diversity, while the Chinese province of Gansu had the highest diversity. Diversity gradient analysis of major haplotypes suggested three domestication centers of Tibetan pigs in the Tibetan Plateau and the Chinese provinces of Gansu and Yunnan. Conclusion: We found two new domestication centers for Tibetan pigs. One is in the Chinese province of Gansu, which lies in the upstream region of the Yellow River, and the other is in the Chinese province of Yunnan.

한국성인의 비만유형에 따른 식사의 질과 다양성 비교 (Comparison of Diet Quality and Diversity according to Obesity Type among 19-64 year old Korean Adults)

  • 구혜민;류소연;박종;한미아;손영은
    • 대한지역사회영양학회지
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    • 제21권6호
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    • pp.545-557
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    • 2016
  • Objectives: This study was performed to compare the diet quality and diversity according to types of obesity categorized by body mass index and waist circumference among Korean adults aged 19-64 years. Methods: This study used the data of the 5th Korea National Health and Nutrition Examination Survey (KNHANES-V) and included 11,081 study participants. Type of obesity was categorized into 4 groups (Type 1: BMI obesity + abdominal obesity; Type 2: BMI obesity only; Type 3: abdominal obesity only; Type 4: Normal). To compare the diet quality and diversity according to obesity type, ANCOVA (Analysis of covariance) was used with stratification of age groups (19-44 years, 45-64 years). Results: With regard to comparative analysis of diet quality, there were significant differences between diet qualities in energy, protein, thiamin, riboflavin, niacin, phosphorous and iron and type of obesity in the 19-44 age group, while there were significant differences between diet qualities on protein, vitamin C, phosphorous and type of obesity in the 45-64 age group. There was no significant difference between diet diversity score and type of obesity in Korean adults. Conclusions: This study showed that in Korean adults, diet qualities of some nutrients were different among obesity types, while diet diversity was not. These observations should be considered in an effort to improve intake of over-and deficient nutrients and in further studies to evaluate the effects of nutrient quality on obesity.

Genetic diversity analysis of Thai indigenous pig population using microsatellite markers

  • Charoensook, Rangsun;Gatphayak, Kesinee;Brenig, Bertram;Knorr, Christoph
    • Asian-Australasian Journal of Animal Sciences
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    • 제32권10호
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    • pp.1491-1500
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    • 2019
  • Objective: European pigs have been imported to improve the economically important traits of Thai pigs by crossbreeding and was finally completely replaced. Currently Thai indigenous pigs are particularly kept in a small population. Therefore, indigenous pigs risk losing their genetic diversity and identity. Thus, this study was conducted to perform large-scale genetic diversity and phylogenetic analyses on the many pig breeds available in Thailand. Methods: Genetic diversity and phylogenetics analyses of 222 pigs belonging to Thai native pigs (TNP), Thai wild boars (TWB), European commercial pigs, commercial crossbred pigs, and Chinese indigenous pigs were investigated by genotyping using 26 microsatellite markers. Results: The results showed that Thai pig populations had a high genetic diversity with mean total and effective ($N_e$) number of alleles of 14.59 and 3.71, respectively, and expected heterozygosity ($H_e$) across loci (0.710). The polymorphic information content per locus ranged between 0.651 and 0.914 leading to an average value above all loci of 0.789, and private alleles were found in six populations. The higher $H_e$ compared to observed heterozygosity ($H_o$) in TNP, TWB, and the commercial pigs indicated some inbreeding within a population. The Nei's genetic distance, mean $F_{ST}$ estimates, neighbour-joining tree of populations and individual, as well as multidimensional analysis indicated close genetic relationship between Thai indigenous pigs and some Chinese pigs, and they are distinctly different from European pigs. Conclusion: Our study reveals a close genetic relationship between TNP and Chinese pigs. The genetic introgression from European breeds is found in some TNP populations, and signs of genetic erosion are shown. Private alleles found in this study should be taken into consideration for the breeding program. The genetic information from this study will be a benefit for both conservation and utilization of Thai pig genetic resources.

대학 교직원 식당에서의 식단중심요리의 다양성 (Diversity of Main Dishes of Menus at University Faculty Cafeterias)

  • 김석영;박미연
    • 대한영양사협회학술지
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    • 제21권4호
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    • pp.320-332
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    • 2015
  • This study investigated the main dishes of menus at university faculty cafeterias to understand current lunch menu trends. A sample of 1040 menus was collected from Internet homepages of 52 universities between March and May, 2014. The main dishes of menus were categorized into six groups based on main ingredients and cooking methods. The most frequently served main dish ingredient was pork followed by fish/seafood, and poultry. Pork dishes and chicken dishes were mainly roasted, pan fried, or deep fried with various carbohydrate ingredients to bulk them up. Large amounts of chili pepper, corn syrup, and oil were added to improve the bland flavor of these dishes, which contain starchy ingredients. In contrast to pork dishes or chicken dishes, 40.2% of beef dishes was served in a more traditional way as soup. Fewer kinds of fish or seafood were used, and the cooking methods also lacked diversity. In conclusion, main dish menus at university faculty cafeterias have undergone changes in terms of ingredients and cooking methods. Meat dishes cooked using traditional methods are becoming less common, especially for pork and chicken dishes, which are quite sweet, salty, and spicy. Extensive use of carbohydrate ingredients was found in some meat dishes and side dishes in one-dish meals.

MIMO 채널 대각화: 선형 검출 ZF, MMSE (MIMO Channel Diagonalization: Linear Detection ZF, MMSE)

  • 양재승;신태철;이문호
    • 한국인터넷방송통신학회논문지
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    • 제16권1호
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    • pp.15-20
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    • 2016
  • 공간다중화 방식을 사용하는 MIMO 시스템은 다이버시티 기법을 사용하는 MIMO 시스템과 비교할 때 높은 전송률을 달성하지만 다이버시티 이득이 낮아 데이터 전송 신뢰도를 높이기 위하여 MIMO 수신단에서 공간정보스트림을 분리해야한다. 본 논문에서는 격자부호에 의한 채널 용량 검출 기법, 사용자 3인인 간섭채널과 선형검출기법인 ZF(Zero Forcing)와 MMSE(Minimum Mean Square Error) 검파 기법을 비교했다. 이때 채널은 Diagonal 채널이 된다. 즉, Diagonal 채널은 $[H]_N[H]_N^{-1}=[I]_N$로 역행렬이 element-wise inverse로 Jacket 행렬의 성질을 만족함을 확인했다.

Gender Diversity and Financial Stability: Evidence from Malaysian Listed Firms

  • AL-ABSY, Mujeeb Saif Mohsen;ALMAAMARI, Qais;ALKADASH, Tamer;HABTOOR, Ammar
    • The Journal of Asian Finance, Economics and Business
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    • 제7권12호
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    • pp.181-193
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    • 2020
  • This study examines the relationship between gender diversity (women on the board and women on the audit committee) and a firm's financial stability. The ordinary least square analysis was used to determine the relationship. To measure the financial stability of Malaysian suspect firms, i.e., firms with the lowest positive earnings, the Altman (1993) Z-Score measurement was utilized. The results indicate that women on the board are significantly and negatively associated with the firm's financial stability. That is, they are related to low financial stability, which contradicts the agency and resource dependence theories. Regarding women directors on the audit committee, there is no significant relationship with financial stability, meaning that they cannot protect the company against financial distress. These results are robust and do not change when using different measurements of gender diversity, one-year lag of independent variables, and other methods of analysis, namely random effect panel data. This study is the first to alert policymakers, stakeholders, researchers, and society in general to the need to re-evaluate and strengthen the role of women directors in improving firms' financial stability, particularly in emerging economies like Malaysia.

레이라이 페이딩하에서 FFH/BFSK 시스템의 diversity를 이용한 성능 분석 (A Performance Analysis of FFH/BFSK System Using Diversity Under Rayleigh Fading)

  • 조용진;이두석;공관식;조형래
    • 한국정보통신학회:학술대회논문집
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    • 한국해양정보통신학회 1999년도 춘계종합학술대회
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    • pp.280-285
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    • 1999
  • 본 논문에서는 군용 통신의 목적과는 달리 의도적 또는 비의도적인 재밍(Jamming)현상 보다는 전파의 다경로 채널에서 수신 신호 포락선의 변동으로 인한 레이라이 페이딩이 있을 때 고속 주파수 도약(FFH) BFSK 시스템의 성능을 분석하였다. 다경로 페이딩 채널과 레이라이 페이딩을 이론적으로 정리하고 페이딩이 없을때와 있을 때 시스템의 성능을 알아보았다. 이 시스템에 경로 다이버시티를 적용하였을 때 약 20dB이상의 성능 개선이 이루어 짐을 알 수 있었다. 주파수 변조 방식이 DPSK일때와 비교하였다.

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