• 제목/요약/키워드: Dissociation constants

검색결과 127건 처리시간 0.029초

DFT/B3LYP Study of the Substituent Effects on the Reaction Enthalpies of the Antioxidant Mechanisms of Magnolol Derivatives in the Gas-Phase and Water

  • Najafi, Meysam;Najafi, Mohammad;Najafi, Houshang
    • Bulletin of the Korean Chemical Society
    • /
    • 제33권11호
    • /
    • pp.3607-3617
    • /
    • 2012
  • In this paper, the study of various ortho- and meta-substituted Magnolol derivatives is presented. The reaction enthalpies related to three antioxidant action mechanisms HAT, SET-PT and SPLET for substituted Magnolols have been calculated using DFT/B3LYP method in gas-phase and water. Calculated results show that electron-withdrawing substituents increase the bond dissociation enthalpy (BDE), ionization potential (IP) and oxidation/reduction enthalpy (O/RE), while electron-donating ones cause a rise in the proton dissociation enthalpy (PDE) and proton affinity (PA). In ortho- position, substituents show larger effect on reaction enthalpies than in meta-position. In comparison to gas-phase, water attenuates the substituent effect on all reaction enthalpies. In gas-phase, BDEs are lower than PAs and IPs, i.e. HAT represents the thermodynamically preferred pathway. On the other hand, SPLET mechanism represents the thermodynamically favored process in water. Results show that calculated enthalpies can be successfully correlated with Hammett constants (${\sigma}_m$) of the substituted Magnolols. Furthermore, calculated IP and PA values for substituted Magnolols show linear dependence on the energy of the highest occupied molecular orbital ($E_{HOMO}$).

Study of Protonation Behaviour and Distribution Ratios of Hydroxamic Acids in Hydrochloric and Perchloric Acid Solutions Through Hammett Acidity Function, Bunnett-Olsen and Excess Acidity Method

  • Agarwal, Manisha;Singh, Priyanka;Pande, Rama
    • Korean Chemical Engineering Research
    • /
    • 제57권2호
    • /
    • pp.164-171
    • /
    • 2019
  • The protonation parameters, dissociation constants ($pK_{BH^+}$) of conjugate acid, slope values (m, ${\phi}$ and $m^*$) and correlation coefficients (r) of hydroxamic acids were determined by Hammett acidity function method, Bunnett-Olsen method and excess acidity method in hydrochloric and perchloric acid solutions. Effect of acid concentration on partition and percentage protonation was also studied. $pK_{BH^+}$ values show that hydroxamic acids do not behave as Hammett bases, but hydroxamic acids behave as weak bases in strong acidic solutions. The values of $pK_{BH^+}$ obtained through Bunnett-Olsen method and excess acidity method were compared with the Hammett acidity function. ChemAxon's MarvinSketch 6.1.5 software was also used for determining $pK_a$, pI and microspecies distribution (%) of hydroxamic acids with pH. Hydrogen donor and acceptor values and logD were also obtained. The results show that N-p-chlorophenyl-4-bromobenzohydroxamic acid has the highest $pK_a$ and lowest logD values. On the contrary, N-phenyl-3,5-dinitrobenzohydroxamic acid has lowest the $pK_a$ and highest logD values.

새로운 질소-산소계 여러 자리 리간드의 합성 및 전이금속(Ⅱ)이온 착물의 안정도상수 (Syntheses of New Nitrogen-Oxygen Multidentate Ligands and Their Stability Constants of Transition Metal(Ⅱ) Ions)

  • 김선덕;장기호;김준광
    • 대한화학회지
    • /
    • 제42권5호
    • /
    • pp.539-548
    • /
    • 1998
  • 여러자리 산소-질소계 리간드들은 시프염기 리간드인 Bis(salicylidene)-ethylendiamine(BSED), Bis(salicylidene)-propylenediamine(BSPD), Bis(salicylidene)-diethylenetriamine(BSDT), Bis(salicylidene)-triethylenetetraamine(BSTT) 및 Bis(salicylidene)-tetraethylenepentaamine(BSTP)의 이민기를 수소환원장치에서 백금촉매를 이용하여 네자리 리간드인 N,N'-bis(2-hydroxybenzyl)-ethylenediamine(BHED)과 N,N'-bis(2-hydroxybenzyl)-propylenediamine(BHPD), 다섯자리 N,N'-bis(2-hydroxybenzyl)-diethylenetriamine(BHDT), 여섯자리 N,N'-bis(2-hydroxybenzyl)-triethylenetriamine(BHTT), 일곱자리 N,N'-bis(2-hydroxybenzyl)-tetraethylenepentaamine(BHTP) 리간드들을 합성하였다. 리간드들의 양성자 해리상수와 전이금속(Ⅱ)과 착물의 안정도상수는 전위차 적정법으로 측정하였다. 리간드별 전이금속(Ⅱ)이온에 대한 착물 안정도상수값$(logK_{ML})$의 크기는 BHED아연(Ⅱ)의 순서로 이 결과는 Irving-Williams 서열과 잘 일치하여 증가하였다.

  • PDF

Analysis of the Stability of HLA-A2 Molecules Expressed on the Cell Surface

  • Lim, Jong-Seok;Lee, Ki-Young;Lee, Hee-Gu;Kim, Ik-Hwan;Lee, Chong-Kil;Han, Seong-Sun;Kim, Kil-Hyoun
    • BMB Reports
    • /
    • 제29권4호
    • /
    • pp.286-293
    • /
    • 1996
  • Association of antigenic peptide with class I MHC is believed to be crucial for maintaining stable conformation of class I molecules. T2 cells that are defective in TAP gene function mainly express class I molecules with an unstable conformation due to little or no association with antigenic peptides, whereas T1 cells that are normal in TAP gene function mainly express the stable form of class I molecules. In this work, attempts were made to determine the molecular stability of stable and unstable class I molecules. Dissociation of HLA-A2 molecules on T1 and T2 cells was monitored by flow cytometry using anti-HLA-A2 antibody after the cells were treated with brefeldin A to shut down the transport of newly-assembled HLA-A2. Estimated dissociation rate constants for the stable and unstable forms of HLA-A2 were 0.076 $h^{-1}$ and 0.66 $h^{-1}$, respectively. It appeared that both T1 and T2 cells express stable and unstable class I complex, but with different ratios of the two forms. Furthermore, $interferon-{\gamma}$ treatment of T1 cells appeared to induce the expression of both the stable and unstable class I molecules. These results demonstrate that class I MHC molecules can be divided into two groups in terms of structural stability and that they exist on the cell surface in both forms in a certain ratio.

  • PDF

제빵효모 Adenylate Kinase의 효소학적 특성에 관하여 (Studies on Enzymatic Characteristic′s of Adenylate Kinase from Baker′s Yeast)

  • 기우경
    • 한국미생물·생명공학회지
    • /
    • 제12권4호
    • /
    • pp.277-283
    • /
    • 1984
  • 제방 효모로 부터 분리 정제한 adenylate kinase 는 한개의 기질에 의해 또 하나의 기질 결합을ADP생성 반응에서는 4배, AMP와 Mg·ATP 생성에서는 2배 촉진되었다. 기질 특이성에 있어서는 nucleotide monophosphale일 경우 dAMP만이 활성을 보여주었으며 nucleotide triphosphate일 경우 ATP이외 UTP, ITP, GTP의 순위로 활성이 높았다. AMP와 Mg·ATP가 기질일 경우 과잉의 AMP는 pH 7.2와 pH8.0에서는 Mg·ATP에 경쟁적으로 저해하였으며 pH가 높을수록 그 Ki정수는 낮았다. Phosphoenolpyruvate는 AMP에 대해 경쟁적 Mg·ATP에 대해서는 비 경쟁적 저해제 이었으며 Adenosine pentaphosphoadenosine은 모든 기질에 대해 경쟁적 저해제로 작용하였다. 제빵 효모로부터의 adenylate kinase는 아미노산 조성에 있어서 동물의 Mitochondria형에 가까우며 Ito등의 결과와 일치하지 않았다. 상기와 같은 효소학적 성질을 종합 고찰한 결과 효모 adenylate kinase는 동물의 Mitochondria형 효소로 분류할 수 있으며 효모 adenylate kinase에 있어 연구자 상호간의 차이점은 사용한 균주의 차이에 기인하는 것으로 생각된다.

  • PDF

pH에 따른 부식유기산의 메틸수은 결합 리간드 변화: X-선 흡수분석 (pH Dependence of CH3Hg+-binding Sites in Humic Acid: An X-ray Absorption Study)

  • 윤소정
    • 한국지하수토양환경학회지:지하수토양환경
    • /
    • 제16권6호
    • /
    • pp.122-132
    • /
    • 2011
  • Mercury accumulates in biota mainly as methylmercury. In nature, methylmercury shows high affinity to organic matter and $CH_3Hg^+$-organic matter complexation affects the mobility and bioavailabiity of methylmercury. In this study, we examined the methylmercury binding sites in an aquatic humic acid as affected by the pH condition using Hg $L_{III}$-edge extended X-ray absorption fine structure (EXAFS). We evaluated methylmercury binding humic ligands using methylmercury-thiol, methylmerury-carboxyl, and methylmercury-amine complexation models. When $CH_3Hg^+$-to-humic reduced sulfur ratio is 0.3, we found that most of $CH_3Hg^+$ binds to thiol ligands at pH 5 and 7. At pH 7, however, some carboxyl or amine ligand contribution is observed, unlike at pH 5 where $CH_3Hg^+$ almost exclusively binds to thiol ligands. The carboxyl or amine ligand contribution may indicate that some types of thiol ligands in the natural organic matter have relatively low complexation constants or acid dissociation constants compared to those of some carboxyl or amine ligands. Analysis results indicate that ~0.2 fraction of methylmercury binds to amine or carboxyl ligands and ~0.8 to thiol ligands at pH 7.

피리딘을 포함하는 여섯자리 $N_6$ 리간드와 전이금속 이온 착물의 안정도상수 (Stability Constants for Transition Metal ions of Hexadentate $N_6$ Ligands Containing Two Pyridyl Groups)

  • 김선덕;김준광;박윤열
    • 분석과학
    • /
    • 제12권5호
    • /
    • pp.397-402
    • /
    • 1999
  • 두 개의 피리딘기를 포함하는 열린고리 형태의 여섯자리 질소계 리간드 1,15-bis(2-pyridyl)-2,6,10,14-tetraazapentadecane tetrahydroehloride (bpyped 4HCl)을 합성하고 원소분석, 적외선 분광법, 핵자기 공명법 및 질량 스펙트럼으로 분석하였다. 합성된 리간드의 산 해리상수($logK{^n}_H$)와 Cu(II), Ni(II), Co(II) 및 Zn(II) 에 대한 안정도 상수값을 수용액에서 전위차 적정법으로 구하였고, 이때 온도는 $25^{\circ}C$ 및 이온강도 0.10 M($KNO_3$)으로 고정시켰다. 지방족 아민의 질소 원자들 사이에 한 개 또는 두 개의 프로필기를 포함하는 bpyped와 유사한 리간드들의 지방족 아민 고리 길이 효과에 따른 산 해리 상수 및 전이금속(II)에 대한 안정도 상수 영향을 알아보았다.

  • PDF

Synthesis, Tautomeric Structure, Dyeing Characteristics, and Antimicrobial Activity of Novel 4-(2-Arylazophenyl)-3-(2-hydroxyphenyl)-1-phenyl-2-pyrazolin-5-ones

  • Metwally, M.A.;Bondock, S.A.;El-Desouky, S.I.;Abdou, M.M.
    • 대한화학회지
    • /
    • 제56권1호
    • /
    • pp.82-91
    • /
    • 2012
  • Novel azopyrazolin-5-one dyes 4a-f were synthesized by the regioselective reaction of phenylhydrazine with 2,3,4-chromantrione-3-arylhydrazones 2a-f. The acid dissociation constants $pK_a$ for the series prepared were determined and correlated by the Hammett equation. The results of such correlation together with the spectral data indicated that the studied compounds exist predominantly in the hydrazone keto structure, (D) as the Z-configuration. The dyes were applied to polyester fabrics, affording orange-yellow shades and assessments of their dyeing performance are considered. Further, the compounds 4a-f were screened for their antimicrobial activity against various microorganisms.

Density Functional Theory Calculations for Chemical Reaction Mechanisms of C4F8

  • 최희철;송미영;윤정식
    • 한국진공학회:학술대회논문집
    • /
    • 한국진공학회 2015년도 제49회 하계 정기학술대회 초록집
    • /
    • pp.133-133
    • /
    • 2015
  • Recently, it has been shown that the ${\omega}B97X-D/aVTZ$ method is strongly recommended as the best practical density functional theory(DFT) for rigorous and extensive studies of saturated or unsaturated $C_4F_8$ species because of its high performance and reliability especially for van der Waals interactions. All the feasible isomerization and dissociation paths of $C_4F_8$ molecules were investigated at this theoretical level and rate constants of their chemical reactions were computed by using variational transition-state theory for a deep insight into $C_4F_8$ reaction mechanisms. Fates and roles of C4F8 molecules and their fragments in plasma phases could be clearly explained based on our computational results.

  • PDF

Characterization of Recombinant Drosophila melanogaster Myo-inositol-l-phosphate Synthase Expressed in Escherichia coli

  • Park, Sang-Hee;Kim, Jong-Il
    • Journal of Microbiology
    • /
    • 제42권1호
    • /
    • pp.20-24
    • /
    • 2004
  • Cloned myo-inositol-1-phosphate synthase (INOS) of Drosophila melanogaster was expressed in Escherichia coli, and purified using a His-affinity column. The purified INOS required NAD$\^$+/ for the conversion of glucose-6-phosphate to inositol-1-phosphate. The optimum pH for myo-inositol-1-phosphate synthase is 7.5, and the maximum activity was measured at 40$^{\circ}C$. The molecular weight of the native enzyme, as determined by gel filtration, was approximately M$\_$r/ 271,000${\pm}$15,000. A single subunit of approximately M$\_$r/ 62,000${\pm}$5,000 was detected upon SDS-polyacrylamide gel electrophoresis. The Michaelis ($K_{m}$) and dissociation constants for glucose-6-phosphate were 3.5 and 3.7 mM, whereas for the cofactor NAD$\^$+/ these were 0.42 and 0.4 mM, respectively.