• Title/Summary/Keyword: Dissociation constants

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Experimental and Theoretical Investigations of Spectral, Tautomerism and Acid-Base Properties of Schiff Bases Derived from Some Amino Acids

  • Ebead, Y.H.;Salman, H.M.A.;Abdellah, M.A.
    • Bulletin of the Korean Chemical Society
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    • v.31 no.4
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    • pp.850-858
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    • 2010
  • The electronic absorption spectra of five Schiff bases derived from 2-hydroxy-1-naphthaldehyde with glycine, alanine, leucine, valine and phenylalanine have been measured in various solvents. The observed bands were assigned to the proper electronic transitions and compared with the predicted transitions at the semiempirical level of theory. The calculated equilibrium constants are in agreement with the experimental results, predicting the existence of all studied compounds predominantly or completely in keto-imine tautomerism. On the other hand, a correlation between $\nu\;(cm^{-1})$ (main frequency of each compound) and the well known solvent parameters $E_T$ (30), $\varepsilon_T$, $\pi^*$ been made. Furthermore, the acid dissociation constants, $pK_a$, were determined by using three different spectrophotometric methods.

Solvolyses of t-Butyl Halides in Binary Mixtures of Methanol with 1,2-Dimethoxyethane, 1,2-Dichloroethane and Pyridine

  • Yeol Sakong;Shi Choon Kim;Jin Sung Kim;Ikchoon Lee
    • Bulletin of the Korean Chemical Society
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    • v.11 no.2
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    • pp.99-105
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    • 1990
  • The Gutmann acceptor number(AN), solvatochromic parameters $({\alpha},{\beta}\;and\;{\pi}^{\ast})$ and hydrogen bonding equilibrium constants (KHB) were determined for three binary systems of methanol with 1,2-dimethoxyethane(DME), 1,2-dichloroethane(DCE) and pyridine (PYD). The solvolysis rate constants of t-butyl chloride, bromide and iodide were also determined in the three binary systems. Solvent properties and solvolysis rates have been discussed in the light of various solvent parameters. Solvolysis of t-butyl halides are most conveniently explained by the two-stage mechanism involving ion-pair intermediate with the ion-pair formation for chloride and ion pair dissociation for iodide as rate limiting.

The Kinetics of Complexation of Manganese(Ⅱ), Cobalt(Ⅱ) and Nickel(Ⅱ) Ions with Some Dicarboxylates in Aqueous Solution

  • Yun Sock Sung;Doh Jae-Bum;Choi Ki Young
    • Bulletin of the Korean Chemical Society
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    • v.13 no.6
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    • pp.659-662
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    • 1992
  • The pressure-jump relaxation method has been used to determine the rate constants for the formation and dissociation of maganese(Ⅱ), cobalt(Ⅱ), and nickel(Ⅱ) with some dicarboxylates in aqueous solution at zero ionic strength. The carboxylate ligands used are 3-nitrophthalate, 4-nitrophthalate, and phenylmalonate. The activation parameters have alse been obtained from the temperature dependence of the rate constants. A dissociative interchange mechanism with a chelate ring closure step as rate determining is employed to interpret the kinetic data of manganese(Ⅱ) and cobalt(Ⅱ) complexes. The rates of formation of nickel(Ⅱ) complexes are controlled by both the solvent exchange step and the chelate ring closure step.

A New Strategy for Determining Optimum pH of Isozymes

  • Yoon, Kil-Joong
    • Bulletin of the Korean Chemical Society
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    • v.25 no.7
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    • pp.997-1002
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    • 2004
  • A hydrogenperoxide sensor containing peroxidase extracted from horseradish was constructed and pH effect on its sensing ability was investigated. Current profiles of the biosensor with pH and the electrophoretic analysis showed that horseradish peroxidase consists of two isozymes. Assuming that it is a hypothetical twoisozyme mixture, the current profiles were deconvoluted into two Gaussians. Application of the new Michaelis-Menten equation connoting pH concept to this system enabled to find all the related dissociation constants of the isozyme-substrates and the isozyme-proton complexes and to determine pHs for the maximal isozyme activities.

Cyclodextrin as a Biomimetic Model Enzyme- the Catalysis of Aspirin Hydrolysis Included by Cyclodextrins (생체효소 유사물질로서의 시클로덱스트린의 작용- 시클로덱스트린으로 포접된 아스피린의 가수분해 촉매작용-)

  • Choi, Hee-Sook
    • Journal of Pharmaceutical Investigation
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    • v.21 no.4
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    • pp.231-236
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    • 1991
  • The molecular nature of aspirin hydrolysis was studied using cyclodextrin as a biomimetic model for esterase. Cyclodextrin was selected for this purpose because it meets the necessary requirements for the hydrolysis study, Dissociation constants and catalytic rates were obtained under alkaline conditions by the kinetic method.

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GTPase Activity Analysis of eRF3 in Euplotes octocarinatus

  • Song, Li;Dong, Jun-Li;Zhao, Ya-Qin;Chai, Bao-Feng;Liang, Ai-Hua
    • Journal of Microbiology and Biotechnology
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    • v.20 no.9
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    • pp.1283-1287
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    • 2010
  • In eukaryotes, eRF3 participates in translation termination and belongs to the superfamily of GTPases. In this work, the dissociation constants for nucleosides bound to Euplotes octocarinatus eRF3 in the presence and absence of eRF1a were determined using fluorescence spectra methods. Furthermore, a GTP hydrolyzing assay of eRF3 was carried out using an HPLC method, and the kinetic parameters for GTP hydrolysis by eRF3 were determined. Consistent with data from humans, the results showed that eRF1a promoted the binding of GTP to eRF3 and the GTP hydrolyzing activity of eRF3. However, in contrast to the lack of GTP binding in the absence of eRF1 in human eRF3, the E. octocarinatus eRF3 was able to bind GTP by itself. The nucleotide binding affinity of the E. octocarinatus eRF3 also differed from the human data. A structure model and amino acid sequence alignment of potential G domains indicated that these differences may be due to valine 317 and glutamate 452 displacing the conserved glycine and lysine involved in GTP binding.

Lipid-binding properties of TRIM72

  • Kim, Sung-Hyen;Seo, Jeong-Hwa;Ko, Young-Gyu;Huh, Young-Duk;Park, Heon-Yong
    • BMB Reports
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    • v.45 no.1
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    • pp.26-31
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    • 2012
  • TRIM72 is known to play a critical role in skeletal muscle membrane repair. To better understand the molecular mechanisms of this protein, we carried out an in vitro binding study with TRIM72. Our study proved that TRIM72 binds various lipids with dissociation constants ($K_d$) ranging from 88.2 ${\pm}$ 9.9 nM to 550.5 ${\pm}$ 134.5 nM. In addition, the intrinsic fluorescence of TRIM72 exponentially decreased when the protein was diluted with stirring. The time-resolved fluorescence decay occurred in a concentration-independent manner. The fluorescence-decayed TRIM72 remained in its secondary structure, but its binding properties were significantly reduced. The dissociation constants ($K_d$) of fluorescence-decayed TRIM72 for palmitate and stearate were 159.1 ${\pm}$ 39.9 nM and 355.4 ${\pm}$ 106.0 nM, respectively. This study suggests that TRIM72 can be dynamically converted by various stimuli. The results of this study also provide insight into the role of TRIM72 in the repair of sarcolemma damage.

Interaction of Antihistaminics with Muscarinic Receptor(I) -Action on the cardiac muscarinic receptor- (항(抗) Histamine제(劑)와 Muscarinic Receptor와의 상호작용(相互作用)(I) -심장(心臟) muscarinic receptor에 대한 작용(作用)-)

  • Lee, Shin-Woong;Park, Yeung-Joo;Lee, Jeung-Soo;Ha, Kwang-Won;Jin, Kap-Duck
    • YAKHAK HOEJI
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    • v.32 no.2
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    • pp.101-111
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    • 1988
  • $[^3H]$ Quinuclidinyl benzilate(QNB) binding assays were performed in the dog ventricular sarcolemma fraction enriched approx. 32-fold in sarcolemma compared to the starting homogenate to elucidate the effect of antihistaminics on cardiac muscarinic receptor. Chlorpheniramine(CHP) inhibited specific binding of $[^3H]$QNB and delayed the equilibrium binding. The rate constants at $37^{\circ}C$ for formation and dissociation of the QNB receptor complex were $0.38{\times}10^9\;M^{-1}$ and $1.6{\times}10^{-2}\;min^{-1}$, respectively. The mean value for the dissociation constant from the pairs of the rate constants was 43. 2 pM and this value was similar to the value(44.8pM) determined from Scatchard analysis. CHP decreased association rate constant, indicating increase in $K_D$ value. Decrease in affinity without affecting the binding site concentration$(B_{max})$ for $[^3H]$QNB binding by CHP was also demonstrated by Scatchard analysis. $K_i$ values for $H_i$-blockers that inhibited specific $[^3H]$QNB binding were $0.02{\sim}4.8{\mu}M$. Cimetidine with $K_i$ value of $230{\mu}M$, however, was ineffective in displacing $[^3H]$QNB binding at concentration of $50{\mu}M$. The Hill coefficient for $H_1$-blockers were about one. The results indicate that $H_1$-antihistaminics inhibit $[^3H]$ QNB binding by interaction with myocardiac muscarinic cholinergic receptor and anticholinergic side effects of these drugs are mainly due to this receptor blocking mechanism.

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Synthesis and Analytical Application of Chelating Resins Containing Polyamines (폴리아민류를 작용기로 하는 킬레이트수지의 합성 및 분석적 응용)

  • Kim Sun Deuk;Park Jung Eun;Park Myon Yong
    • Journal of the Korean Chemical Society
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    • v.36 no.5
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    • pp.652-660
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    • 1992
  • The polyamine resins were synthesized by reacting amines such as diethylenetriamine(dien), triethylenetetramine(trien), tetraethylenepentamine(tetren), and pentaethylenehexamine(penten). Stepwise dissociation constants of amines, enthalpy and free energy of metal chelate were determined. Formation constants $(log k_1) of metal chelates were in order of Cu(Ⅱ) > Ni(Ⅱ) > Cd(Ⅱ) > Zn(Ⅱ) > Co(Ⅱ) and tendency of stabilities were proportional to nitrogen numbers of ligand such as dien < trien < tetren > penten. Elutional selectivites of metal ions on resin were agreed to formation constants of metal chelates. {\Delta}H and {\Delta}G were calculated by Van't Hoff equation. Stability constants (log k1) of metalic complexes were in order Cu(Ⅱ) > Ni(Ⅱ) > Cd(Ⅱ) > Zn(Ⅱ) > Co(Ⅱ), and tendency of stabilities were {\circledP}_L-Dien < {\circledP}_L-Trien < {\circledP}_L-Tetren < {\circledP}_L-Penten. The elutional selectivities of metal ions were agreed to stability constants of metal chelates.

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Effect of High Pressure on the Stability of Metal Complex Ion by Polarographic Method (폴라로그래피에 의한 金屬錯이온의 安定度에 미치는 壓力의 影響)

  • Heung Lark Lee;Zun Ung Bae;Yu Chul Park;Jong Hoon Yun
    • Journal of the Korean Chemical Society
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    • v.32 no.1
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    • pp.30-36
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    • 1988
  • The effect of high pressure on the stability of copper(II), cadmium(II) and zinc (II) complex ions with ethylenediamine, propylenediamine, diethylenetriamine has been investigated polarographically. 0.10M KN$O_3$ solution was used as a supporting electrolyte. The concentration of chelating agents was varied from 0.01M to 1.00M. The dissociation constants of metal complex ions were increased with increasing the pressure from 1 atmosphere to 1,500 atmospheres. The increment of the dissociation constant per unit atmosphere varied from 1.1 ${\times} 10^{-3}$% for Cu(dien)$_2^{2+}$ to 5.0 ${\times} 10^{-3}$ % for Zn(en)$_2^{2+}$.

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