• 제목/요약/키워드: Dimensionality Reduction

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Evaluation of Histograms Local Features and Dimensionality Reduction for 3D Face Verification

  • Ammar, Chouchane;Mebarka, Belahcene;Abdelmalik, Ouamane;Salah, Bourennane
    • Journal of Information Processing Systems
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    • 제12권3호
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    • pp.468-488
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    • 2016
  • The paper proposes a novel framework for 3D face verification using dimensionality reduction based on highly distinctive local features in the presence of illumination and expression variations. The histograms of efficient local descriptors are used to represent distinctively the facial images. For this purpose, different local descriptors are evaluated, Local Binary Patterns (LBP), Three-Patch Local Binary Patterns (TPLBP), Four-Patch Local Binary Patterns (FPLBP), Binarized Statistical Image Features (BSIF) and Local Phase Quantization (LPQ). Furthermore, experiments on the combinations of the four local descriptors at feature level using simply histograms concatenation are provided. The performance of the proposed approach is evaluated with different dimensionality reduction algorithms: Principal Component Analysis (PCA), Orthogonal Locality Preserving Projection (OLPP) and the combined PCA+EFM (Enhanced Fisher linear discriminate Model). Finally, multi-class Support Vector Machine (SVM) is used as a classifier to carry out the verification between imposters and customers. The proposed method has been tested on CASIA-3D face database and the experimental results show that our method achieves a high verification performance.

유전 알고리즘과 러프 집합을 이용한 계층적 식별 규칙을 갖는 가스 식별 시스템의 설계 (Design of Gas Identification System with Hierarchical Rule base using Genetic Algorithms and Rough Sets)

  • 방영근;변형기;이철희
    • 전기학회논문지
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    • 제61권8호
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    • pp.1164-1171
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    • 2012
  • Recently, machine olfactory systems as an artificial substitute of the human olfactory system are being studied actively because they can scent dangerous gases and identify the type of gases in contamination areas instead of the human. In this paper, we present an effective design method for the gas identification system. Even though dimensionality reduction is the very important part, in pattern analysis, We handled effectively the dimensionality reduction by grouping the sensors of which the measured patterns are similar each other, where genetic algorithms were used for combination optimization. To identify the gas type, we constructed the hierarchical rule base with two frames by using rough set theory. The first frame is to accept measurement characteristics of each sensor and the other one is to reflect the identification patterns of each group. Thus, the proposed methods was able to accomplish effectively dimensionality reduction as well as accurate gas identification. In simulation, we demonstrated the effectiveness of the proposed methods by identifying five types of gases.

EFMDR-Fast: An Application of Empirical Fuzzy Multifactor Dimensionality Reduction for Fast Execution

  • Leem, Sangseob;Park, Taesung
    • Genomics & Informatics
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    • 제16권4호
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    • pp.37.1-37.3
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    • 2018
  • Gene-gene interaction is a key factor for explaining missing heritability. Many methods have been proposed to identify gene-gene interactions. Multifactor dimensionality reduction (MDR) is a well-known method for the detection of gene-gene interactions by reduction from genotypes of single-nucleotide polymorphism combinations to a binary variable with a value of high risk or low risk. This method has been widely expanded to own a specific objective. Among those expansions, fuzzy-MDR uses the fuzzy set theory for the membership of high risk or low risk and increases the detection rates of gene-gene interactions. Fuzzy-MDR is expanded by a maximum likelihood estimator as a new membership function in empirical fuzzy MDR (EFMDR). However, EFMDR is relatively slow, because it is implemented by R script language. Therefore, in this study, we implemented EFMDR using RCPP ($c^{{+}{+}}$ package) for faster executions. Our implementation for faster EFMDR, called EMMDR-Fast, is about 800 times faster than EFMDR written by R script only.

MULTIFACTOR DIMENSIONALITY REDUCTION(MDR)을 이용한 한우 도체중에서의 주요 SNP 규명 (Main SNP Identification of Hanwoo Carcass Weight with Multifactor Dimensionality Reduction(MDR) Method)

  • 이제영;김동철
    • 응용통계연구
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    • 제21권1호
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    • pp.53-63
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    • 2008
  • 일반적으로 인간의 질병과 가축의 경제적인 특성은 하나의 유전자가 아닌 여러 유전자의 상호작용으로 일어난다고 믿고 있다. 따라서 본 연구에서는 세대를 거듭할수록 대립유전자의 유전이 안정적으로 발생되어지고 개체의 기능적인 유전적 가치를 직접적으로 추정할 수 있는 single nucleotide polymorphism(SNP)을 한우의 경제적 특성인도체중(carcass cold weight)에 대하여 모수적인 방법인 ANOVA와 비모수적인 방법인 multifactor dimensionality reduction(MDR)을 이용하여 하나의 유전자의 효과와 두 개의 유전자의 상호작용 효과를 비교하였다. ANOVA에서는 하나의 유전자 SNP1이 도체중에 유의한 효과가 있었고 상호작용 효과에서는 도체중에 유의한 효과는 없었다. MDR에서는 하나의 유전자의 효과인 SNP1과 두 개의 유전자의 상호작용인 SNP1*SNP2의 효과가 컸으며 SNP1과 SNP1*SNP2를 비교했을 시에는 SNP1*SNP2의 효과가 더 크게 나타났다. 이는 개별 SNP유전자 보다 복합 SNP유전자의 상호작용이 경제적인 특성인 도체증에 더 영향을 준다는 것을 알 수 있었다.

A study on interaction effect among risk factors of delirium using multifactor dimensionality reduction method

  • Lee, Jong-Hyeong;Lee, Yong-Won;Lee, Yoon-Seok;Lee, Jea-Young
    • Journal of the Korean Data and Information Science Society
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    • 제22권6호
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    • pp.1257-1264
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    • 2011
  • Delirium is a neuropsychiatric disorder accompanying symptoms of hallucination, drowsiness, and tremors. It has high occurrence rates among elders, heart disease patients, and burn patients. It is a medical emergency associated with increased morbidity and mortality rates. That s why early detection and prevention of delirium ar significantly important. And This mental illness like delirium occurred by complex interaction between risk factors. In this paper, we identify risk factors and interactions between these factors for delirium using multi-factor dimensionality reduction (MDR) method.

A Classification Method Using Data Reduction

  • Uhm, Daiho;Jun, Sung-Hae;Lee, Seung-Joo
    • International Journal of Fuzzy Logic and Intelligent Systems
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    • 제12권1호
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    • pp.1-5
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    • 2012
  • Data reduction has been used widely in data mining for convenient analysis. Principal component analysis (PCA) and factor analysis (FA) methods are popular techniques. The PCA and FA reduce the number of variables to avoid the curse of dimensionality. The curse of dimensionality is to increase the computing time exponentially in proportion to the number of variables. So, many methods have been published for dimension reduction. Also, data augmentation is another approach to analyze data efficiently. Support vector machine (SVM) algorithm is a representative technique for dimension augmentation. The SVM maps original data to a feature space with high dimension to get the optimal decision plane. Both data reduction and augmentation have been used to solve diverse problems in data analysis. In this paper, we compare the strengths and weaknesses of dimension reduction and augmentation for classification and propose a classification method using data reduction for classification. We will carry out experiments for comparative studies to verify the performance of this research.

Classification of High Dimensionality Data through Feature Selection Using Markov Blanket

  • Lee, Junghye;Jun, Chi-Hyuck
    • Industrial Engineering and Management Systems
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    • 제14권2호
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    • pp.210-219
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    • 2015
  • A classification task requires an exponentially growing amount of computation time and number of observations as the variable dimensionality increases. Thus, reducing the dimensionality of the data is essential when the number of observations is limited. Often, dimensionality reduction or feature selection leads to better classification performance than using the whole number of features. In this paper, we study the possibility of utilizing the Markov blanket discovery algorithm as a new feature selection method. The Markov blanket of a target variable is the minimal variable set for explaining the target variable on the basis of conditional independence of all the variables to be connected in a Bayesian network. We apply several Markov blanket discovery algorithms to some high-dimensional categorical and continuous data sets, and compare their classification performance with other feature selection methods using well-known classifiers.

CNN 기반 초분광 영상 분류를 위한 PCA 차원축소의 영향 분석 (The Impact of the PCA Dimensionality Reduction for CNN based Hyperspectral Image Classification)

  • 곽태홍;송아람;김용일
    • 대한원격탐사학회지
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    • 제35권6_1호
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    • pp.959-971
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    • 2019
  • 대표적인 딥러닝(deep learning) 기법 중 하나인 Convolutional Neural Network(CNN)은 고수준의 공간-분광 특징을 추출할 수 있어 초분광 영상 분류(Hyperspectral Image Classification)에 적용하는 연구가 활발히 진행되고 있다. 그러나 초분광 영상은 높은 분광 차원이 학습 과정의 시간과 복잡도를 증가시킨다는 문제가 있어 이를 해결하기 위해 기존 딥러닝 기반 초분광 영상 분류 연구들에서는 차원축소의 목적으로 Principal Component Analysis (PCA)를 적용한 바 있다. PCA는 데이터를 독립적인 주성분의 축으로 변환시킬 수 있어 분광 차원을 효율적으로 압축할 수 있으나, 분광 정보의 손실을 초래할 수 있다. PCA의 사용 유무가 CNN 학습의 정확도와 시간에 영향을 미치는 것은 분명하지만 이를 분석한 연구가 부족하다. 본 연구의 목적은 PCA를 통한 분광 차원축소가 CNN에 미치는 영향을 정량적으로 분석하여 효율적인 초분광 영상 분류를 위한 적절한 PCA의 적용 방법을 제안하는 데에 있다. 이를 위해 PCA를 적용하여 초분광 영상을 축소시켰으며, 축소된 차원의 크기를 바꿔가며 CNN 모델에 적용하였다. 또한, 모델 내의 컨볼루션(convolution) 연산 방식에 따른 PCA의 민감도를 분석하기 위해 2D-CNN과 3D-CNN을 적용하여 비교 분석하였다. 실험결과는 분류정확도, 학습시간, 분산 비율, 학습 과정을 통해 분석되었다. 축소된 차원의 크기가 분산 비율이 99.7~8%인 주성분 개수일 때 가장 효율적이었으며, 3차원 커널 경우 2D-CNN과는 다르게 원 영상의 분류정확도가 PCA-CNN보다 더 높았으며, 이를 통해 PCA의 차원축소 효과가 3차원 커널에서 상대적으로 적은 것을 알 수 있었다.

유방암과 CCND1, ESR1, CDK7 유전자 다형성의 상호작용; 로지스틱 회귀분석과 multifactor dimensionality reduction(MDR)의 분석 비교 (Gene-gene interaction of CCND1, ESR1 and CDK7 on the risk of breast cancer detected by multifactor dimensionality reduction and logistic regression)

  • 최지엽;;;이경무;노동영;유근영;;강대희
    • 대한예방의학회:학술대회논문집
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    • 대한예방의학회 2004년도 제56차 추계 학술대회 연제집
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    • pp.40.1-40.1
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    • 2004
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Major SNP Marker Identification with MDR and CART Application

  • Lee, Jea-Young;Choi, Yu-Mi
    • Communications for Statistical Applications and Methods
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    • 제15권2호
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    • pp.265-271
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    • 2008
  • It is commonly believed that diseases of human or economic traits of livestock are caused not by single genes acting alone, but multiple genes interacting with one another. This issue is difficult due to the limitations of parametric-statistic methods of gene effects. So we introduce multifactor-dimensionality reduction(MDR) as a methods for reducing the dimensionality of multilocus information. The MDR method is nonparametric (i. e., no hypothesis about the value of a statistical parameter is made), model free (i. e., it assumes no particular inheritance model) and is directly applicable to case-control studies. Application of the MDR method revealed the best model with an interaction effect between the SNPs, SNP1 and SNP3, while only one main effect of SNP1 was statistically significant for LMA (p < 0.01) under a general linear mixed model.