• 제목/요약/키워드: DNA density

검색결과 271건 처리시간 0.028초

마우스의 악하선 세포의 분리 및 배양조건 확립 (Mouse Submandibular Gland Cells: Isolation and Establishment of Culture Condition En vitro)

  • 소준노;박호원;장선일;이금영;이원구
    • 한국동물학회지
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    • 제34권2호
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    • pp.148-158
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    • 1991
  • 마우스의 악하선 세포를 배양하기 위하여 악하선 조직으로부터 세포를 분리하는 조건과 분리된 세포의 배양조건을 조사하였다. 세포분리에는 0.25% trypsin을 사용하였으며 배양액은 여러 농도의 fetal bovine serum (FBS) 또는 low protein serum replacement(LPSR)가 첨가된 Dulbecco's modified Eagle's medium(DME) 이었다. 배양된 세포의 대부분 상피형 세포로 확인 되었으며, 배양시 5-10%의 FBS를 첨가하였을 경우에 가장 높은 DNA합성능을 보였으나 이보다 높은 농도의 FBS 첨가시에는 오히려 DNA 합성능이 저하되었다. 혈청 대체물인 LPSR 첨가에 의한 악하선 세포를 배양 했을 때 population doubling time은 42.5 시간이었고 세포의 포화밀도는 1.2 $\times$10 5 cells / $cm^2$이었다. Dihydrotestosterone (DHT)은 악하선 배양세포의 DNA 합성에 관여하지 않거나, 관여한다면 DNA 합성을 억제하는 것으로 보였다. 이에 반해 Thyroxine (T4)은 악하선 배양세포의 DNA 합성을 현저히 증가시켰다. T4와 DHT 모두다 배양세포의 단백질 합성능을 증가시켰다. 또한 이 호르몬들이 악하선 배양세포의 epidermal growth factor(EGF) 분비를 증가시킨 결과는 DHT와 T4는 악하선 세포의 EGF 생산 뿐만 아니라 EGF 분비의 조절에도 관련되어 있음을 시사한다. 본 실험에서 정해진 악하선 세포의 배양조건은 악하선 세포의 증식과 기능의 변조를 탐구하는데 유용하게 응용될 수 있을 것으로 생각된다.

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큰비쑥(Artemisia fukudo) 추출물의 암세포 증식 억제효과 (The Cytotoxicity of Artemisia fukudo Extracts Against HL-60 Cells)

  • 김길남;이정아;윤원종;김지영;송관필;박수영
    • 한국식품영양과학회지
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    • 제36권7호
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    • pp.819-824
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    • 2007
  • 본 연구는 큰비쑥를 80% EtOH로 추출하고 극성에 따른 용매분획을 실시하여 혈핵암 세포주를 대상으로 분획별에 따른 암세포 증식억제(cytotoxicity) 효과와 이러한 혈액암 세포주에 대한 세포독성 효과가 세포자연사(apoptosis)에 의해 일어나는 것인지, 몇 가지 apoptosis 유도 실험을 통해 확인해 보았다. HL-60 세포에 대한 증식억제 효과는 전반적으로 모든 처리구에서 농도의존적인 세포증식 억제효과가 나타났으며, 특히 헥산과 디클로로메탄 분획물에서 가장 강한 세포성장 억제효과가 나타났다. 이러한 세포성장 억제효과가 apoptosis 유도에 의한 것인지 알아보기 위해 apoptosis 유도에 의한 세포사멸의 특징인 DNA 단편화 현상을 비롯하여 세포형태학적 변화 및 유동세포분석기를 통한 DNA content를 측정한 결과, 큰비쑥 추출물에 의한 암세포 증식억제효과는 apoptosis를 유도하여 세포자연사를 통해 세포의 성장을 억제하는 것으로 확인되었다.

White Spot Syndrome Virus in Penaeid Shrimp Cultured in Korea

  • Shin, En-Joo;Park, Jae-Hak;Lee, Yeon-Hee
    • Journal of Microbiology and Biotechnology
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    • 제11권3호
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    • pp.394-398
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    • 2001
  • Because of the great concern over the possibility of contamination from the rod-shaped nuclear virus (PRDV) from Japan and white spot virus (WSSV) from Taiwan, most eggs used in Korean shrimp farms are currently obtained from local broodstock. In addition, the screening of imported broodstock for any viral presence at the National Fisheries Research and Development Institute is also mandatory. Nonetheless, massive mortality from white spot syndrome continues in Korea. In the present study, we present an improved PCR method to use tissue-extracted DNA instead of viral DNA extracted from a purified virus based on a sucrose density gradient, and produced results within 8 h. In 1998, this modified PCR method was able to detect that diseased Penaeus japonicus were infected within 8 h. In 1998, this modified PCR method was able to detect that diseased Penaeus japonicus were infected only with PRDV, while Fenneropenaeus chinensis were infected with both PRDV and WSSV. In 1999, PRDV and WSSV were detected in F. chinensis with signs of infection, but not with WSSV alone.

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Approach for Cloning and Characterization of Blue/White Flower Color Specific cDNA Clones from Two Commelina Species

  • Lee Gunho;Yeon Mooshik;Hur Yoonkang
    • Journal of Plant Biotechnology
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    • 제7권1호
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    • pp.45-50
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    • 2005
  • To clone blue and white flower color specific genes, mRNA differential display was carried out with two different Commelina species, C. communis Linne for blue color and C. coreana Leveille for. leucantha Nakai for white color. Fifty two and 100 cDNA clones specific for blue or white flower color, respectively, were ranging from 200 to 700 bp in size. From the reverse northern blot analysis, 12 and 7 positive clones were selected for blue and white flower, respectively. These clones appear to be novel cDNAs for these Commelina plants, but not color specific. This finding was supported by the northern blot analysis. However, two clones, B18 and B19, derived from blue flowered Commelina were highly expressed than in the white Commelina species, implying that further study will be valuable. The results indicated that both mRNA display experiment and dot blot analysis may not sensitive enough to clone color-determining gene from the plant, leading to explore more advanced method, like high-density colony array study (HDCA).

Molecular Detection of Verotoxigenic Escherichia coli (VTEC) from Animal Feces for Screening VTEC-shedders

  • Kobayashi, Y.;Sato, M.;Taguchi, H.;Koike, S.;Nakatsuji, H.;Tanaka, K.
    • Asian-Australasian Journal of Animal Sciences
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    • 제17권3호
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    • pp.423-427
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    • 2004
  • Seventy-six animals including cattle, sheep, horses, 6 species of zoo animals were employed for collection of fresh feces in order to detect verotoxigenic Esherichia coli (VTEC) by safe, quick and sensitive PCR-based molecular methods. Bacterial cell disruption with bead-beating followed by bacterial DNA purification with hydroxyapatide chromatography and gel filtration allowed DNA preparation from animal feces with high recovery and purity. A mountain goat was firstly shown by PCR and sequencing to shed verotoxin 2 gene (vt2) that was used to generate vt2 probe and second primer set for nested PCR to attempt more sensitive detection. Most sensitive nested PCR revealed that 45% of tested cattle and 47% of tested zoo animals were VTEC-positive, while least sensitive normal PCR detected VTEC from none of these animals except a mountain goat. Moderately sensitive detection by PCR in combination with hybridization suggested that the VTEC density varied between the VTEC-positive cattle.

Molecular identification and expression analysis of a natural killer enhancing factor-A from black rockfish Sebastes schlegelii

  • Lee, Jeong-Ho;Kim, Joo-Won;Park, Chan-Il
    • 한국어병학회지
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    • 제22권3호
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    • pp.343-352
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    • 2009
  • Natural-killer-cell-enhancing factor (NKEF) belongs to the newly defined peroxiredoxin (Prx) family. It was originally isolated from human erythroid cells. The black rockfish NKEF cDNA was identified through the expressed sequence tag (EST) analysis of PBLs libraries. The full-length NKEF cDNA was 1433 bp long and contained an open reading frame (ORF) of 594 bp that encoded 198 amino-acid residues. The 5' UTR had a length of 39 bp, and the 3’UTR 800 bp. The deduced amino-acid sequence of the black rockfish had a density 93.4, 92.9, 87.8, 85.8, 84.8, 83.8, 80.3, 79.7, 77.2, and 75.2% that of the pufferfish, olive flounder, channel catfish, zebrafish, chicken, common carp, Myotis lucifugus, cattle, human PrxI, rat PrxI, human NKEF-A, and Xenopus tropicalis, respectively. The NKEF gene was expressed in all the tissues of the black rockfish. The RT-PCR indicated that the NKEF transcripts were predominantly in the spleen and gill, less dominantly in the PBLs, head kidney, trunk kidney, and liver, and least in the intestine and muscles. This is the first report on the existence of the NKEF-A gene in black rockfish.

치환 퓨란의 양성자 친화도에 대한 Ab Initio 연구 (Ab Initio Studies on Proton Affinities of Substituted Furans)

  • 이갑용;이현미
    • 대한화학회지
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    • 제42권4호
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    • pp.391-397
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    • 1998
  • 퓨란 고리를 포함하는 bis-furan lexitropsin에서, DNA minor groove의 염기쌍과 결합하는 중요 부분인 퓨란의 기하학적 구조를 반경험적 방법(MNDO)과 ab initio(Hartree-Fock) 방법으로 최적화 시켰다. 최적화된 구조에 대해 6-31G와 $6-31G^{\ast}$ basis set을 사용하여 전자적 구조와 양성자 친화도를 구하였다. 아울러 퓨란의 양성자 친화도에 미치는 치환기 효과를 알아보기 위해 전자를 주는 기와 전자를 끄는 기를 갖는 여러 치환 퓨란에 대해 양성자 친화도를 조사하였다. 그 결과 전자를 주는 기는 퓨란의 양성자 친화도를 증가시키는 반면 전자를 끄는 기는 양성자 친화도를 감소시켰으며, 이 결과 치환 퓨란의 산소 원자의 atomic charge와 전자밀도로 설명할 수 있었다

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Effects of feed intake on the diversity and population density of homoacetogens in the large intestine of pigs

  • Matsui, Hiroki;Mimura, Ayumi;Maekawa, Sakiko;Ban-Tokuda, Tomomi
    • Asian-Australasian Journal of Animal Sciences
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    • 제32권12호
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    • pp.1907-1913
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    • 2019
  • Objective: Homoacetogens play important roles in the production of acetate in the large intestine of monogastric mammals. However, their diversity in the porcine large intestine is still unknown. Marker gene analysis was performed to assess the effects of energy level on the diversity and population densities of homoacetogens in porcine feces. Methods: Crossbred pigs were fed high or low energy-level diets. The high-intake (HI) diet was sufficient to allow a daily gain of 1.2 kg. The low-intake (LI) diet provided 0.6 times the amount of energy as the HI diet. Genetic diversity was analyzed using formyltetrahydrofolate synthetase gene (FHS) clone libraries derived from fecal DNA samples. FHS DNA copy numbers were quantified using real-time polymerase chain reaction. Results: A wide variety of FHS sequences was recovered from animals in both treatments. No differences in FHS clone libraries between the HI and LI groups were found. During the experimental period, no significant differences in the proportion of FHS copy numbers were observed between the two treatment groups. Conclusion: This is the first reported molecular diversity analysis using specific homoacetogen marker genes from the large intestines of pigs. There was no observable effect of feed intake on acetogen diversity.

Effective High-Throughput Blood Pooling Strategy before DNA Extraction for Detection of Malaria in Low-Transmission Settings

  • Nyunt, Myat Htut;Kyaw, Myat Phone;Thant, Kyaw Zin;Shein, Thinzer;Han, Soe Soe;Zaw, Ni Ni;Han, Jin-Hee;Lee, Seong-Kyun;Muh, Fauzi;Kim, Jung-Yeon;Cho, Shin-Hyeong;Lee, Sang-Eun;Yang, Eun-Jeong;Chang, Chulhun L.;Han, Eun-Taek
    • Parasites, Hosts and Diseases
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    • 제54권3호
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    • pp.253-259
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    • 2016
  • In the era of (pre) elimination setting, the prevalence of malaria has been decreasing in most of the previously endemic areas. Therefore, effective cost- and time-saving validated pooling strategy is needed for detection of malaria in low transmission settings. In this study, optimal pooling numbers and lowest detection limit were assessed using known density samples prepared systematically, followed by genomic DNA extraction and nested PCR. Pooling strategy that composed of 10 samples in 1 pool, $20{\mu}l$ in 1 sample, was optimal, and the parasite density as low as $2p/{\mu}l$ for both falciparum and vivax infection was enough for detection of malaria. This pooling method showed effectiveness for handling of a huge number of samples in low transmission settings (<9% positive rate). The results indicated that pooling of the blood samples before DNA extraction followed by usual nested PCR is useful and effective for detection of malaria in screening of hidden cases in low-transmission settings.

거제도 장목항에서 적조원인생물 Akashiwo sanguinea(Dinophyceae): 형태, 분자계통학적 특성 및 온도와 염분에 따른 성장 특성 (Bloom-forming dinoflagellate Akashiwo sanguinea(Dinophyceae) in Jangmok Harbour of Geoje Island, Korea: Morphology, phylogeny and effects of temperature and salinity on growth)

  • 한경하;;윤주연;강병준;김현정;서민호;서호영;신현호
    • 환경생물
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    • 제37권2호
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    • pp.119-128
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    • 2019
  • 거제도 장목항에서 분리한 Akashiwo sanguinea의 형태와 계통학적 특성을 명확히 하고, 여러 온도와 염분구배에 따른 성장조건을 파악하고자 하였다. A. sanguinea의 세포는 오각형이었고, 세포의 길이는 54.7~70.3 ㎛, 폭은 31.5~48.5 ㎛로 나타났다. 핵은 세포의 중심에 위치하였고, 엽록체는 황갈색으로 세포 전체에 퍼져있었다. 상추구는 알파벳 e 모양이었다. 계통분석 결과 장목항에서 분리한 본 배양주는 ribotype A에 포함되었다. 온도 및 염분구배에 따른 성장 실험은 5℃ 이하의 온도를 제외한 모든 온도구배에서 성장이 나타났다. 그리고, 최대성장속도는 온도 20℃, 염분 20 psu에서 0.50 day-1로 나타났고, 최대세포밀도는 온도 25℃, 염분 30 psu에서 1,372 cells mL-1였다. 이 결과는 A. sanguinea가 가을철에 한국 연안에서 최대 증식을 보일 수 있다는 것을 나타낸다.