• 제목/요약/키워드: Correlation and Cluster Analyses

검색결과 48건 처리시간 0.021초

Characterization of odourous compounds in air, leachate, stream and well in and around Taju-Bello Dumpsite, Lagos, Nigeria

  • Azeez, L.;Oyedeji, O.A.;Abdulsalami, I.O.;Adewuyi, S.O.
    • Advances in environmental research
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    • 제2권2호
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    • pp.143-153
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    • 2013
  • This study investigated the concentrations of odourous compounds in air, leachate, stream and well in and around Taju-Bello dumpsite. Meteorological parameters (temperature, relative humidity, wind velocity) and six odour families comprising sulphur ($H_2S$), ammonia ($NH_3$), aromatic (benzene, toluene, ethylbenzene, styrene, p-xylene, m-xylene), aliphatic (hexane), oxygenated (formaldehyde, acetaldehyde) and halogenated (tetrachloroethene, trichloroethene, carbontetrachloride) compounds were measured. Meteorological parameters suggested low dispersal of pollutants at L1 with possible perspiration and suffocation from exposure to high temperature, relative humidity and low wind velocity. The trend of abundance of odourous compounds at studied locations is of the order dumpsite (L1) > leachate (L4) > 100 m away from dumpsite (L2) > 200 m away from dumpsite (L3) > stream (L5) > well (L6). $H_2S$, Oxygenated and aromatic compounds were the major contributors to odour strength in these locations. Correlation, factor and cluster analyses of the data revealed similarities of sources as biogenics and xenobiotics inherent in the wastes as the main sources of these odourous compounds.

Environmental Change Uncovers Differences in Polygenic Effect of Chromosomes from a Natural Population of Drosophila melanogaster

  • Jeung, Min-Gull;Thompson, James-N.Jr;Lee, Chung-Choo
    • Animal cells and systems
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    • 제1권4호
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    • pp.609-617
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    • 1997
  • Polygenic variation of sternopleural bristle number was investigated at the whole chromosome level in a natural population of Drosophila melanogasfer. Fifty pairs of second and third chromosomes were analyzed at $25^\circ{C}$. Since environmental factors such as temperature influence polygenic expression of quantitative traits, whole chromosomal effects of 28 pairs from the larger original sample were measured under cycling temperature, a $10-30\circ{C}$ cycle in 24 hours, to reveal any polygenic alleles whose effects might be masked under the constant temperature. While third chromosomes typically showed a larger contribution to polygenic variation in both environments, second chromosomes showed greater sensitivity to environmental changes. Cluster analyses of second and third chromosomes produced a limited number of clusters. Such a small number of cluster's implies that there may be a small number of genes, or quantitative trait loci (QTLs), having large effects on phenotypic variation. The genetic structure assessed under constant temperature, however, did not show any correlation with the structure under cycling temperature. The discrepancy could be caused by independent response of each polygenic allele to temperature changes. Thus, polygenic structure in natural populations should be thought of as a temporally changing profile of interactions between gene and ever-changing environment.

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Ambient Air Concentrations of Benzene, Toluene, Ethylbenzene and Xylene in Bangkok, Thailand during April-August in 2007

  • Laowagul, Wanna;Garivait, Hathairatana;Limpaseni, Wongpun;Yoshizumi, Kunio
    • Asian Journal of Atmospheric Environment
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    • 제2권1호
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    • pp.14-25
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    • 2008
  • Benzene, toluene, ethyl benzene and m-, p-, and o-xylene, the most influential aromatic volatile organic compounds (VOCs), were measured in Bangkok, Thailand, one of the most rapidly developing urban areas in Southern East Asia. The purpose of this study is to characterize the ambient air quality with respect to above mentioned aromatic compounds. The data were monitored in ten sites which cover roadside area, residential area and background area. Canister technique was used to obtain air sample at 24 hour interval per a month during April-August in 2007. GC/MS with three stage preconcentrator was used to analyze these samples. The average concentrations of benzene, toluene, ethyl benzene m-, p-xylene and o-xylene are 5.8, 36.1, 4.1, 11.0 and $3.7{\mu}g/m^3$, respectively. They were observed to be distributed in a log-normal form. Moreover, o-xylene and m, p-xylene exhibited a very good correlation (r=0.976). The slope of the regression equation between them was 3.07 which consisted with a previous reported value. The average ratio of toluene to benzene was 6.4 in April, May June and August. This value was comparable to the ones measured in other Asian cities. Two types of statistical analyses, cluster and factor analyses, were applied to the data in this study. Well characterization was made to understand the air quality of Bangkok area.

Genetic parameters for worm resistance in Santa Inês sheep using the Bayesian animal model

  • Rodrigues, Francelino Neiva;Sarmento, Jose Lindenberg Rocha;Leal, Tania Maria;de Araujo, Adriana Mello;Filho, Luiz Antonio Silva Figueiredo
    • Animal Bioscience
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    • 제34권2호
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    • pp.185-191
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    • 2021
  • Objective: The objective of this study was to estimate the genetic parameters for worm resistance (WR) and associated characteristics, using the linear-threshold animal model via Bayesian inference in single- and multiple-trait analyses. Methods: Data were collected from a herd of Santa Inês breed sheep. All information was collected with animals submitted to natural contamination conditions. All data (number of eggs per gram of feces [FEC], Famacha score [FS], body condition score [BCS], and hematocrit [HCT]) were collected on the same day. The animals were weighed individually on the day after collection (after 12-h fasting). The WR trait was defined by the multivariate cluster analysis, using the FEC, HCT, BCS, and FS of material collected from naturally infected sheep of the Santa Inês breed. The variance components and genetic parameters for the WR, FEC, HCT, BCS, and FS traits were estimated using the Bayesian inference under the linear and threshold animal model. Results: A low magnitude was obtained for repeatability of worm-related traits. The mean values estimated for heritability were of low-to-high (0.05 to 0.88) magnitude. The FEC, HCT, BCS, FS, and body weight traits showed higher heritability (although low magnitude) in the multiple-trait model due to increased information about traits. All WR characters showed a significant genetic correlation, and heritability estimates ranged from low (0.44; single-trait model) to high (0.88; multiple-trait model). Conclusion: Therefore, we suggest that FS be included as a criterion of ovine genetic selection for endoparasite resistance using the trait defined by multivariate cluster analysis, as it will provide greater genetic gains when compared to any single trait. In addition, its measurement is easy and inexpensive, exhibiting greater heritability and repeatability and a high genetic correlation with the trait of resistance to worms.

Analysis of Genetic Variation in Botrytis cinerea Isolates Using Random Amplified Polymorphic DNA Markers

  • Choi, In-Sil;Kim, Dae-Hyuk;Lee, Chang-Won;Kim, Jae-Won;Chung, Young-Ryun
    • Journal of Microbiology and Biotechnology
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    • 제8권5호
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    • pp.490-496
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    • 1998
  • Random amplified polymorphic DNA (RAPD) markers were used to survey genetic variability among 34 Botrytis cinerea isolates from nine different host plants in Korea. For RAPD analysis, 115 arbitrary decamer primers were initially screened for polymorphic major DNA bands with 11 representative B. cinerea isolates. Eleven primers that initially detected polymorphisms were tested a second time with additional 23 isolates of B. cinerea as well as one isolate of Botrytis squamosa as an outgroup. The RAPD analyses revealed that all isolates except one showed different molecular phenotypes. Dendrograms obtained from dissimilarity matrices using the unweighted paired group method of arithmetic means (UPGMA) showed the 36.4% to 90.0% similarity among all B. cinerea isolates. The B. squamosa isolate showed the least similarity to all B. cinerea isolates. The cluster analyses indicated no correlation among all the characteristics examined including molecular phenotypes, host and geographic origins, year of isolation, or pathogenicity. The RAPD data suggest that a high level of genetic variation exists among Korean populations of B. cinerea and it seems to be caused by heterokaryosis among preexisting molecular phenotypes.

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Big Data Astronomy: Large-scale Graph Analyses of Five Different Multiverses

  • Hong, Sungryong
    • 천문학회보
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    • 제43권2호
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    • pp.36.3-37
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    • 2018
  • By utilizing large-scale graph analytic tools in the modern Big Data platform, Apache Spark, we investigate the topological structures of five different multiverses produced by cosmological n-body simulations with various cosmological initial conditions: (1) one standard universe, (2) two different dark energy states, and (3) two different dark matter densities. For the Big Data calculations, we use a custom build of stand-alone Spark cluster at KIAS and Dataproc Compute Engine in Google Cloud Platform with the sample sizes ranging from 7 millions to 200 millions. Among many graph statistics, we find that three simple graph measurements, denoted by (1) $n_\k$, (2) $\tau_\Delta$, and (3) $n_{S\ge5}$, can efficiently discern different topology in discrete point distributions. We denote this set of three graph diagnostics by kT5+. These kT5+ statistics provide a quick look of various orders of n-points correlation functions in a computationally cheap way: (1) $n = 2$ by $n_k$, (2) $n = 3$ by $\tau_\Delta$, and (3) $n \ge 5$ by $n_{S\ge5}$.

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이단계표본추출을 이용한 소결핵병 유병률 추정 (Two-stage Sampling for Estimation of Prevalence of Bovine Tuberculosis)

  • 박선일
    • 한국임상수의학회지
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    • 제28권4호
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    • pp.422-426
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    • 2011
  • For a national survey in which wide geographic region or an entire country is targeted, multi-stage sampling approach is widely used to overcome the problem of simple random sampling, to consider both herd- and animallevel factors associated with disease occurrence, and to adjust clustering effect of disease in the population in the calculation of sample size. The aim of this study was to establish sample size for estimating bovine tuberculosis (TB) in Korea using stratified two-stage sampling design. The sample size was determined by taking into account the possible clustering of TB-infected animals on individual herds to increase the reliability of survey results. In this study, the country was stratified into nine provinces (administrative unit) and herd, the primary sampling unit, was considered as a cluster. For all analyses, design effect of 2, between-cluster prevalence of 50% to yield maximum sample size, and mean herd size of 65 were assumed due to lack of information available. Using a two-stage sampling scheme, the number of cattle sampled per herd was 65 cattle, regardless of confidence level, prevalence, and mean herd size examined. Number of clusters to be sampled at a 95% level of confidence was estimated to be 296, 74, 33, 19, 12, and 9 for desired precision of 0.01, 0.02, 0.03, 0.04, 0.05, and 0.06, respectively. Therefore, the total sample size with a 95% confidence level was 172,872, 43,218, 19,224, 10,818, 6,930, and 4,806 for desired precision ranging from 0.01 to 0.06. The sample size was increased with desired precision and design effect. In a situation where the number of cattle sampled per herd is fixed ranging from 5 to 40 with a 5-head interval, total sample size with a 95% confidence level was estimated to be 6,480, 10,080, 13,770, 17,280, 20.925, 24,570, 28,350, and 31,680, respectively. The percent increase in total sample size resulting from the use of intra-cluster correlation coefficient of 0.3 was 22.2, 32.1, 36.3, 39.6, 41.9, 42.9, 42,2, and 44.3%, respectively in comparison to the use of coefficient of 0.2.

대학생의 쇼핑가치에 따른 신용카드인식 및 신용카드관리행동에 관한 연구 (A Study for the Perception and Management Behaviors on Credit Cards According to the Shopping Value Types of College Students)

  • 서인주
    • 가족자원경영과 정책
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    • 제13권2호
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    • pp.129-151
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    • 2009
  • The first purpose of this study was to reveal the types of shopping value of college students. The second purpose was to examine the change in the perception and management behaviors related to credit cards according to the types of shopping value. The third purpose was to examine the effects of shopping value on perception and management behaviors on credit cards. The data were collected from 392 college students in Seoul by a self-administered questionnaire. Analyses including frequency, mean, factor analysis, Cronbach's alpha, Pearson's correlation analysis, Crosstabulation analysis, analysis of variance, K-means Cluster analysis and Multiple linear regression were conducted using SPSS WIN12.0. The major findings were as follows. First, college students can be categorized into 3 types of shopping values by K-means Cluster analysis of 14 items. The groups were entitled the hedonistic shopping value, the utilitarian shopping value, and the saving shopping value. Second, positive perception and management behaviors related to credit cards were different depending on the types of shopping value. The hedonistic shopping value group had a higher level of positive perception of credit cards and a lower level of credit card management, compared with the other groups. The saving shopping value group had higher levels of both positive perception and management of credit cards. Among the three groups, the utilitarian shopping group had the lowest level of positive perception of credit cards, despite having ahigher level of credit card management. Lastly, the most effective variance on credit card management was the utilitarian shopping value. These results suggest that a healthy shopping value is very important for having a healthy perception and management of credit cards, because shopping value is a critical variance to affect perception and management of credit cards.

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일천궁의 연작재배에 따른 토양 이화학성 및 토양세균군집 연구 (The Study of Soil Chemical Properties and Soil Bacterial Communities on the Cultivation Systems of Cnidium officinale Makino)

  • 김기윤;한경민;김현준;전권석;김충우;정충렬
    • 한국환경농학회지
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    • 제39권1호
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    • pp.1-9
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    • 2020
  • 본 연구에서는 일천궁의 연작재배에 따른 토양 이화학성 및 토양세균군집을 비교 분석하기 위해 천궁 중에서 재배 빈도수가 높은 일천궁의 초작 및 연작 재배지를 선정하여 토양 이화학성 및 토양세균군집 특성을 분석하고, 토양 이화학성 및 토양세균군집 간의 상관관계를 구명하고자 하였다. 토양 이화학성은 농촌진흥청 토양분석법을 이용하였고, 토양세균군집 분석은 Illumina Miseq sequencing system을 이용하여 상대적 빈도수 및 주좌표 분석을 하였다. 토양 이화학성과 토양세균군집 간의 상관관계는 DISTLM과 Spearman's 상관관계 분석을 이용하였다. 일천궁 재배지의 토양세균군집은 일천의 재배법에 따라 뚜렷하게 2개의 cluster로 군집화를 이루었고, 초작 및 연작 재배지 모두 Proteobacteria와 Alphaproteobacteria가 우점종으로 나타났다. 주좌표 분석과 DISTLM 분석에서는 일천궁 재배지의 토양 pH와 Ca이 토양세균의 군집화에 유의적으로 영향을 주고 있음을 확인하였고, Spearman's 상관관계 분석을 통해 일천궁의 재배법에 따라 유의적인 차이를 보였던 Acinobacteria와 Acidobacteria의 상대적 빈도수는 토양 pH, Ca 함량과 유의적인 상관관계를 보이는 것으로 나타났다. 본 연구는 일천궁의 재배법에 따른 토양 이화학성 및 토양세균군집의 변화와 상관관계를 구명하는데 중요한 자료가 될 것으로 판단된다. 또한, 토양 이화학성과 토양세균군집의 변화에 따른 일천궁 재배지의 연작장해 원인을 구명하는데 있어 도움을 줄 수 있을 것이다. 향후 본 연구를 바탕으로 향후 일천궁의 재배법에 따른 곰팡이(fungi)의 군집과 병원성 미생물군집의 변화를 확인하고 토양 이화학성과의 상관관계를 분석할 수 있다면 일천궁의 연작장해 원인을 명확하게 구명하는데 도움을 줄 수 있을 것으로 사료된다.

시판 강정류의 이화학적 특성 및 소비자 기호도에 관한 연구 (Physicochemical Properties and Consumer Acceptability of Commercial Gang-jeong)

  • 류지혜;권용석;김경미;이진영
    • 한국식생활문화학회지
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    • 제29권6호
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    • pp.637-647
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    • 2014
  • This study was conducted to examine the physicochemical properties and consumer acceptability of commercial Gang-jeong. The samples used in this study were nine different Gang-jeong as commercial products. To accomplish this research, the physicochemical properties of nine samples, including moisture, crude lipid, sugar contents, acid value, color values, and texture, were measured. In addition, consumer panels evaluated the overall acceptability, appearance, flavor, sweetness, and texture of samples using a 9-point Likert type scale as well as the perceived intensities of sweetness and rancid odor by a 9-point Just-About-Right (JAR) scale. All data were statistically analyzed using One-way ANOVA, Principle Component Analysis, Hierarchical Cluster Analysis, and Pearson's Correlation Analysis. All physicochemical properties were significantly different among the samples (p<0.001). Analyses of consumer acceptability and JAR ratings of the nine samples showed significant differences (p<0.001).