• 제목/요약/키워드: Colony PCR

검색결과 219건 처리시간 0.02초

생쥐 배아에서의 초기 적혈구 분화를 재현 할 수 있는 배아주 세포에 기초한 간단한 시험관내 분화체계 (A Simple Embryonic Stem Cell-Based in vitro Differentiation System That Recapitulates Early Erythropoietic Events in the Mouse Embryo)

  • 김철근
    • 한국동물학회지
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    • 제39권3호
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    • pp.239-247
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    • 1996
  • 현탁 배양액에서 생쥐 배아주 세포를 배아체(embryoid body. EB)로 분화시키는 간단한 시험내 모델 체계가 초기 적혈구 분화 분석에 유용한 지의 여부를 조사하였다. 분화중인 배아체로부터 각 혈구계열 세포 유형이 만들어지는 지(분화능)의 여부는 혈도형성, benzidine 염색법 및 2단계 콜로니 분석법을 조사하였고, 발생과 분화시기에 바ㅈ추어 적혈구 표시 유전자들이 발현되는 지(발현능)의 여부는 각 분화시기별 배아체로 부터 추출한 RNA를 RT-PCR 방법으로 조사하였다. 분석 결과, 다른 기존의 복잡한 분화 방법에 의한 것과 마찬가지로 모든 혈구계열 세포 유형이 반복성 있게 유도되었다. 더군다나, 분화중인 배아주 세포에서의 글로빈 유전자 발현 전환은 생쥐 배아에서와 유사하게 진행되었으며, 글로빈 유전자의 발현은 적혈구-특이 전사인자인 GATA-1과 Tal-1보다 적어도 12시간 늦게 활성화되었다. 이와같이 간단한 분화 체계에서도 적혈구 분화과정이 효율적으로 반복성 있게 나타나는 것으로 보아, 간단한 현탁배양에서의 분화는 초기 적혈구 분화과정이 분자적 기작을 분석하는데 유용하게 이용될 수 있으리라 본다.

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Biodistribution of a Promising Probiotic, Bifidobacterium longum subsp. longum Strain BBMN68, in the Rat Gut

  • Lv, Yang;Qiao, Xuewei;Zhao, Liang;Ren, Fazheng
    • Journal of Microbiology and Biotechnology
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    • 제25권6호
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    • pp.863-871
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    • 2015
  • Bifidobacterium longum subsp. longum BBMN68, isolated from centenarians in Guangxi, China, has been proved to be a promising probiotic strain for its health benefits. In this study, the biodistribution of this strain in the rat gut was first investigated using the quantitative realtime PCR assay and propidium monoazide. Strain-specific primers were originally designed based on the BBMN68 genome sequence. Healthy rats were orally inoculated with either a single dose of BBMN68 (1010 colony-forming units/kg), or with one dose per day for 7 days and bacterial concentrations were analyzed in detail from the intestinal contents and feces of four different gut locations, including stomach, small intestine, colon, and rectum. Results indicated that strain BBMN68 could overcome the rigors of passage through the upper gastrointestinal tract and transiently accumulate in the colon, even though survival in the stomach and small intestine was not high. A good level of BBMN8 could stay in vivo for 72 h following a 7-day oral administration, and a daily administration is suggested for a considerable and continuous population of BBMN68 to be maintained in the host intestine.

Hath1 Inhibits Proliferation of Colon Cancer Cells Probably Through Up-regulating Expression of Muc2 and p27 and Down-regulating Expression of Cyclin D1

  • Zhu, Dai-Hua;Niu, Bai-Lin;Du, Hui-Min;Ren, Ke;Sun, Jian-Ming;Gong, Jian-Ping
    • Asian Pacific Journal of Cancer Prevention
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    • 제13권12호
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    • pp.6349-6355
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    • 2012
  • Previous studies showed that Math1 homologous to human Hath1 can cause mouse goblet cells to differentiate. In this context it is important that the majority of colon cancers have few goblet cells. In the present study, the potential role of Hath1 in colon carcinogenesis was investigated. Sections of paraffin-embedded tissues were used to investigate the goblet cell population of normal colon mucosa, mucosa adjacent colon cancer and colon cancer samples from 48 patients. Hath1 and Muc2 expression in these samples were tested by immunohistochemistry, quantitative real-time reverse transcription -PCR and Western blotting. After the recombinant plasmid, pcDNA3.1(+)-Hath1 had been transfected into HT29 colon cancer cells, three clones were selected randomly to test the levels of Hath1 mRNA, Muc2 mRNA, Hath1, Muc2, cyclin D1 and p27 by quantitative real-time reverse transcription-PCR and Western blotting. Moreover, the proliferative ability of HT29 cells introduced with Hath1 was assessed by means of colony formation assay and xenografting. Expression of Hath1, Muc2, cyclin D1 and p27 in the xenograft tumors was also detected by Western blotting. No goblet cells were to be found in colon cancer and levels of Hath1 mRNA and Hath1, Muc2 mRNA and Muc2 were significantly down-regulated. Hath1 could decrease cyclin D1, increase p27 and Muc2 in HT29 cells and inhibit their proliferation. Hath1 may be an anti-oncogene in colon carcinogenesis.

Molecular Prevalence of Acarapis Mite Infestations in Honey Bees in Korea

  • Ahn, Ah-Jin;Ahn, Kyu-Sung;Noh, Jin-Hyeong;Kim, Young-Ha;Yoo, Mi-Sun;Kang, Seung-Won;Yu, Do-Hyeon;Shin, Sung Shik
    • Parasites, Hosts and Diseases
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    • 제53권3호
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    • pp.315-320
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    • 2015
  • Acarapis mites, including Acarapis woodi, Acarapis externus, and Acarapis dorsalis, are parasites of bees which can cause severe damage to the bee industry by destroying colonies and decreasing honey production. All 3 species are prevalent throughout many countries including UK, USA, Iran, Turkey, China, and Japan. Based on previous reports of Acarapis mites occurring in northeast Asia, including China and Japan, we investigated a survey of Acarapis mite infestations in honey bees in Korean apiaries. A total of 99 colonies of Apis mellifera were sampled from 5 provinces. The head and thorax of 20 bees from each colony were removed for DNA extraction. PCR assays were performed with 3 primer sets, including T, A, and K primers. Results indicated that 42.4% (42/99) of samples were Acarapis-positive by PCR assay which were sequenced to identify species. Each sequence showed 92.6-99.3% homology with reference sequences. Based on the homology, the number of colonies infected with A. dorsalis was 32 which showed the highest infection rate among the 3 species, while the number of colonies infected with A. externus and A. woodi was 9 and 1, respectively. However, none of the Acarapis mites were morphologically detected. This result could be explained that all apiaries in the survey used acaricides against bee mites such as Varroa destructor and Tropilaelaps clareae which also affect against Acarapis mites. Based on this study, it is highly probable that Acarapis mites as well as Varroa and Tropilaelaps could be prevalent in Korean apiaries.

Agrobacterium을 이용한 형질전환 상추의 세포 현탁배양으로부터 hGM-CSF의 생산 (Production of hGM-CSF from Cell Suspension Culture of Transformed Lettuce Using Agrobacterium-mediated Transformation System)

  • 김영숙;김미영;권태호;양문식
    • Journal of Plant Biotechnology
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    • 제30권1호
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    • pp.97-102
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    • 2003
  • hGM-CSF가 식물세포 현탁 배양을 통하여 생산이 가능한지를 조사하기 위하여 hGM-CSF를 포함하고 있는 A. tumerfaciens LBA4404를 가지고 상추에 형질전환시켰다. 형질전환된 상추로부터 캘러스를 유도하여 캘러스를 이용한 세포배양체계를 확립하였다. PCR과 Southern blot analysis 결과 상추에 hGM-CSF 유전자가 도입된 것을 확인하였으며, Northern blot analysis 결과 상추식물체에 hGM-CSF 유전자가 발현됨을 확인하였다. 현탁 배양 세포로부터 분비된 hGM-CSF를 ELISA를 이용하여 측정한 결과 149.0 $\mu\textrm{g}$/L가 생산됨 을 확인하였다 이러한 결과는 상추의 현탁 배양 세포가 hGM-CSF와 같은 치료용 단백질의 생산 숙주로 이용될 수 있음을 보여주었다.

대추 역병균의 Phytophthora citricola의 동정 (Phytophthora citricola, a Causal Agent of Jujube (Zizyphus jujuba) Fruit Rot)

  • 지형진;임양숙;정기채;조원대
    • 한국식물병리학회지
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    • 제14권5호
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    • pp.402-407
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    • 1998
  • Phytophthora rot on jujube fruit has occurred at several cultivation areas in Kyung-buk and Kyung-nam provinces. Symptoms consisted of brownish to reddish rot on fruits resulting in early drop or mummification. The causal fungus isolated from infected fruits and adjacent leaf stalks was identified as Phytophthora citricola, which has never been reported in Korea. Sporangia were semi-papillate, noncaducous and highly variable in shapes. Plerotic oospores with paragynous antheridia were abundant is single cultures. Sporangia of two isolates were measured as 38-76$\times$20-40 ${\mu}{\textrm}{m}$ and averaged 51.4$\times$27.0 and 55.6$\times$36.0 ${\mu}{\textrm}{m}$. Oogonia were ranged from 26 to 36 ${\mu}{\textrm}{m}$ and averaged 31.3 and 32.0 ${\mu}{\textrm}{m}$. Colony pattern was slightly radiated with sparse aerial mycelia on common media. Minium, optimum and maximum temperatures for mycelial growth were recorded at 7, 25, and 32$^{\circ}C$, respectively. Among tested media, 10% V8A was the best and $25^{\circ}C$ was better than 15$^{\circ}C$ for oospore formation of the fungus. The jujube isolates of P. citricola were readily differentiated from other closely related species in the genus, namely; P. nicotianae, P. citrophthora, P. cactorum, P. capsici, and P. plalmivora on the basis of PCR-RFLP of r-DNA. The fungus showed strong pathogenicty to jujube, apple, pear, orange, persimmon and eggplant, and relatively weak to citron, tomato, pepper and cucumber. In this study, P. citrocola is firstly identified and jujube fruit rot caused by the fungus is recorded as a new disease in Korea.

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Phytophthora nicotianae에 의한 국내 미기록 화훼류 역병 (Unrecorded Phytophthora Diseases of Flowering Plants Caused by Phytophthora nicotianae in Korea)

  • 지형진;김완규;김재영;임성언
    • 한국식물병리학회지
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    • 제14권5호
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    • pp.452-457
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    • 1998
  • Thirty-eight isolates of Phytophthora sp. caused rots on roots and basal stems were collected from five flowering plants from 1992 to 1997 at eight cultivation areas in Korea. All the isolates were identified as P. nicotianae based on following characteristics. The fungus produced markedly papillate, not caducous and ovoid to spherical sporangia, abundant chlamydospores, and small oospores with amphigynous antheridia only when paired with either A1 or A2 mating type. All isolates grew well at 35$^{\circ}C$ and showed distinct arachnoid colony patterns on CMA and PDA. Sizes of sporangia and chlamydospores of five representative isolates from each plant averaged 43-52$\times$30-38 ${\mu}{\textrm}{m}$ and 28 ~34 ${\mu}{\textrm}{m}$. Mating type of the isolates was either A1 or A2, and oogonia and oospores were measured as 28~31 ${\mu}{\textrm}{m}$ and 21~25 ${\mu}{\textrm}{m}$. PCR-RFLP analysis of rDNA of the five isolates resulted that restriction band patterns of the small subunit and ITS regions were identical to a perilla isolate of P. nicotianae, but distinct from P. cactorum and P. capsici. Cross inoculation tests showed that the five isolates had pathogenicity to lily, christmas cactus, anthurium, baby's breath and carnation with different degrees. However, each isolate showed stronger pathogenicity to its corresponding original host than others. Among five lily cultivars Georgia and Quririna were more susceptible than Napoli and others. This is first report of Phytophthora root and stem rot of lily, Christmas cactus, anthurium, baby's breath and monochoria in Korea.

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경북지역의 부루셀라병에 관한 연구 (Studies on the brucellosis in Kyongbuk area)

  • 박노찬;김상윤;조광현;도재철;김영환;신상희;조민희;오강희;김우현
    • 한국동물위생학회지
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    • 제21권4호
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    • pp.451-465
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    • 1998
  • The present study was carried out to investigate the prevalence of brucellosis in Kyungbuk area for the 3 years from 1966 to 1998. Collective milk samples were routinely screened to detect positive farms by using the milk ring test(MRT), and serum agglutination test was performed to detect sero-positive individuals in the MRT positive farms. Attempt were made to isolate the causative organismas from slaughtered sero-positive reactors and some biochemical and polymerase chain reation characters of the isolates were also made to identify the organisms. Seroprevalence to brucellosis in peoples who are close contact with infected dairy herds was also investigated. Brucellosis of dairy cattle was rare before 1997, but has been broken more frequently since early 1998. By the MRT for dairy herds, positive rate was gradually increased every year : 0.6% in 1996, 1.5% in 1997, 3.9% in 1998. Among 262 MRT-positive herds, only 21 herds(8.0%) showed positive brucellosis in serological test. The isolation rates of Brucella sp from tested materials were 51.2% in supramammary glands, 39.5% in milks, and 50.0% in pulmonary Iymphnode, respectively. Isolated strain and biotype were Brucella(B) arbortus biotype 1 in 26 heads, and were B suis biotype 1 in 2 heads. Isolated strain and vaccine strain were very similar in their colony morphology and staining. In drug susceptibility, isolated stains(B abortus) and vaccine strain(B abortus RB-51) were sensitive to ampicillin, gentamycin, kanamycin, neomycin, penicillin, streptomycin, and to tetracycline, but resistant to erythromycin. In the PCR, field strains reacted to BA and IS711 primers, and vaccine strain reacted to BA, IS711, and RB5l primers. In the plate agglutination test of 96 sera of human contacted with animals, serum antibody titer detected 1 : 100 in one person, 1 : 200 in one, and below 1 : 25 in the others.

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치아 근관 감염 검체에서 검은 색소 형성 Prevotella species와 Porphyromonas species의 동정 (Identification of the Black-pigmented Prevotella Species and Porphyromonas Species from Infected Dental Root Canals)

  • 김은숙;김신무
    • 대한임상검사과학회지
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    • 제38권1호
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    • pp.45-53
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    • 2006
  • Anaerobic black-pigmented bacteria have been implicated in the endodontic infections. This group of microorganisms includes Porphyromonas endodontalis, P. gingivalis, Prevotella intermedia, and Prevotella nigrescens. The organisms display a wide variety of virulence factors that may be pertinent to acute endodontic infections. The aim of this study was to identify P. endodontalis, P. gingivalis, P. intermedia, and P. nigrescens by using the special potency disk test, filter paper spot test, 16S rRNA gene-directed PCR, and API 32A system. Microbial samples were collected from root canals of 33 intact teeth with necrotic pulp and apical periodontitis. Conventional laboratory methods were used to identify the strains of anaerobic black pigmented bacteria. Eighteen out of 33 samples were positive for the growth of black-pigmented bacrteria. Five colonies were cultured from each pure cultured colony from Brucella agar plates. Seventy seven colonies were positive for the growth of black-pigmented bacteria. Thirty three out of 77(42.8%) were identifed as P. nigrescens, 10 out of 77(13%)were P. gingivalis, 6 out of 77(7.8%) were P. endodontalis, 10 out of 77(13%) were P. intermedia. On the contrary the reference strains of P. nigrescens, experimental strains of P. nigrescens were susceptible to kanamycin in the special potency disk test. We concluded that after rapid presumptive identification methods, such as the special potency disk test and filter paper spot test were done, 16S rRNA gene PCR and API 32A test would be accurate detection methods for black-pigemented bacteria.

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효모에서 텔로미어 재조합을 관찰하기 위한 새로운 유전학적 연구방법의 개발 (Development of a novel genetic assay for telomere recombination in Saccharomyces cerevisiae)

  • 김민규;배성호
    • 미생물학회지
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    • 제52권1호
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    • pp.116-119
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    • 2016
  • 텔로미어를 안정적으로 유지하는 것은 세포의 증식과 생존에 필수적이다. 비록 텔로미어 유지에는 telomerase가 가장 중요한 수단이지만 재조합도 텔로미어 유지를 위한 또 다른 중요한 과정으로 작용한다. 본 연구에서는 효모의 텔로미어 내부에 존재하는 $TG_{1-3}$ 반복서열을 이용하여 텔로미어 재조합을 관찰할 수 있는 유전학적 방법을 개발하였다. 관찰된 재조합 빈도는 내부 $TG_{1-3}$ 반복서열의 존재 여부에 영향을 받았으며, 생성된 $FOA^rCan^r$ 콜로니로부터 추출한 유전체 DNA를 사용하여 URA3와 CAN1 marker 근처 부위를 PCR 증폭한 결과, 각 콜로니들은 marker를 포함한 염색체 말단 부위가 결손 된 것으로 나타났다. 뿐만 아니라, 더 긴 내부 $TG_{1-3}$ 반복서열을 사용하였을 때 재조합 빈도는 더 증가하였다. 이러한 결과는 $FOA^rCan^r$ 콜로니 형성이 내부와 말단의 $TG_{1-3}$ 반복서열 사이의 재조합에 기인한다는 것을 의미한다.