• Title/Summary/Keyword: Clupea nasus

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Genetic Distances and Variations of Three Clupeid Species Determined by PCR Technique

  • Choi, Sang-Hoon;Yoon, Jong-Man
    • Development and Reproduction
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    • v.18 no.4
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    • pp.287-292
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    • 2014
  • In this study, seven oligonucleotides primers were shown to generate the shared loci, specific loci, unique shared loci to each species and shared loci by the three species which could be obviously calculated. Euclidean genetic distances within- and between-species were also calculated by complete linkage method with the sustenance of the hierarchical dendrogram program Systat version 13. The genomic DNA isolated from herring (Clupea pallasii), Korean anchovy (Coilia nasus) and large-eyed herring (Harengula zunashi), respectively, in the Yellow Sea, were amplified several times by PCR reaction. The hierarchical dendrogram shows three chief branches: cluster 1 (PALLASII 01, 02, 03, 04, 06 and 07), cluster 2 (NASUS 08, 09, 10, 11, 12, 13 and 14), and cluster 3 (ZUNASHI 15, 16, 17, 18, 19, 20, 21 and PALLASII 05). In three clupeid species, the shortest genetic distance displaying significant molecular difference was between individual PALLASII no. 03 and PALLASII no. 02 (0.018). Individual no. 06 of PALLASII was most distantly related to NASUS no. 11 (genetic distance = 0.318). Individuals from herring (C. pallasii) species (0.920) exhibited higher bandsharing values than did individuals from Korean anchovy (C. nasus) species (0.872) (P<0.05). As a result, this PCR analysis generated on the genetic data displayed that the herring (C. pallasii) species was widely separated from Korean anchovy (C. nasus) species. Reversely, individuals of Korean anchovy (C. nasus) species were a little closely related to those of large-eyed herring (H. zunashi) species.

Spatio-temporal Variations in Species Composition and Abundance of Larval Fish Assemblages in the Nakdong River Estuary, Korea (낙동강 하구역 부유성 자치어 종조성의 시·공간 변동)

  • Choi, Hee Chan;Park, Joo Myun;Huh, Sung Hoi
    • Korean Journal of Ichthyology
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    • v.27 no.2
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    • pp.104-115
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    • 2015
  • The species composition of larval fish assemblages in the Nakdong River estuary, Korea, was determined using monthly samples collected between September 2010 and August 2011 at two stations. A total of forty three larval species were collected during the study. Among forty three taxa of fish larvae, summer gobies, Clupea pallasii, Engraulis japonicus, spring gobies, Konosirus punctatus, winter gobies, Sardinops melanostictus, Coilia nasus were dominant taxa, and these eight taxa accounted for 95.0% in the total number of individuals. Species composition and abundance varied greatly spatio-temprally showing the peak abundances of fish larvae in August 2011, and a few fish larvae were occurred in November 2010. Cluster analysis based on the number of individuals of fish larvae showed that 21 month-station sampling units were classified into five groups at the similarity level of 50%, and the results of ANOSIM and SIMPER analysis revealed significant differences in community structure among five groups.