• Title/Summary/Keyword: Clonal characteristics

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Demographic and Clinical Characteristics of Adult Acute Myeloid Leukemia - Tertiary Care Experience

  • Sultan, Sadia;Zaheer, Hasan Abbas;Irfan, Syed Mohammed;Ashar, Sana
    • Asian Pacific Journal of Cancer Prevention
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    • v.17 no.1
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    • pp.357-360
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    • 2016
  • Background: Acute myeloid leukemia (AML) is an acquired clonal frequent malignant disorder of myeloid progenitor cells. Our aim was to study demographical and clinicopathological features of adult Pakistani AML patients at presentation. Materials and Methods: In this single centre study extending from January 2010 to December 2014, data were retrieved from the patient records with a predetermined performa and analyzed with SPSS version 22. Results: Overall 125 patients were diagnosed at our institution with de novo AML during the study period. There were 76 males and 49 females (ratio 1.5:1), with an age range between 15 and 85 years and a mean age of $38.8{\pm}20.1years$. The major complaints were fever (72.8%), generalized weakness (60%), bleeding (37.6%) and dyspnea (12%). Physical examination revealed pallor in 56.8%, splenomegaly and hepatomegaly in 16% and 12.8%, respectively, and lymphodenopathy in 10.4%. The mean hemoglobin was $8.19{\pm}2.12g/dl$ with a mean MCV of $86.0{\pm}9.83fl$, a mean total leukocyte count of $43.1{\pm}68.5{\times}10^9/l$, an ANC of $3.09{\pm}6.66{\times}10^9/l$ and a mean platelet count of $62.3{\pm}78.6{\times}10^9/l$. Conclusions: AML in Pakistani patients is seen in a relatively very young population with male preponderance, compared with the west. However, clinico-pathological features appear comparable to published data.

Plus Tree Selection of Black Locust (Robinia pseudoacacia L.) for Tree Improvement of Timber Characteristics (국내 아까시나무의 용재 특성 향상을 위한 우량개체 선발)

  • Tae-Lim Kim;Hyemin Lim;Kyungmi Lee;Changyoung Oh;Il Hwan Lee;Hwan Su Hwang
    • Korean Journal of Plant Resources
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    • v.36 no.1
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    • pp.91-99
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    • 2023
  • Plus tree selection is the essential first step in a tree improvement program. This study was carried out to select plus trees of black locust (Robinia pseudoacacia L.) for tree improvement in Korea. The candidate plus trees of black locust were selected from twenty-one places in the four provinces (Gangwon, Gyeonggi, Chungcheong and Gyeongsang) following comparison selection. The trees were examined for qualitative and quantitative traits of economic interest like tree height (H), diameter at breast height (DBH), clear bole height (CBH), stem straightness (SS), crown size (CS) and disease resistance. The 64 selected trees showed higher quality in growth characteristics than control trees. Average of height, DBH, CBH, SS and CS were 20.5 m, 31.1 cm, 10.1 m, 1.2 and 5.2 m respectively. In particular, it was shown that the growth characteristics were higher in Chungcheong population. The superiority percentage of selected candidate plus trees of black locust over their respective check trees ranged from 7.3% to 18.9% in height, 20.0% to 40.6% in DBH, 32.8% to 73.5% in CBH, 42.9% to 55.2% in SS and -11.1% to 9.4% in CS, respectively. The selected black locust will be useful in future tree breeding programs based on their clonal and progeny performance.

An Efficient Plant Regeneration System for Sorghum bicolor - a Valuable Major Cereal Crop

  • Baskaran P.;Jayabalan N.
    • Journal of Plant Biotechnology
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    • v.7 no.4
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    • pp.247-257
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    • 2005
  • An efficient, rapid and large-scale in vitro clonal propagation of agronomically important Indian cereal crop genotypes (NSH27 & K5) of Sorghum bicolor (L.) Moench. by enhanced shoot proliferation in shoot tip segments was designed. MS medium fortified with plant growth regulators and coconut water markedly influenced in vitro propagation of Sorghum bicolor. In vitro plantlet production system has been investigated on Murashige and Skoog (MS) medium with the synergistic combination of 6-benzyladenine ($22.2\;{\mu}M$), kinetin ($4.6\;{\mu}M$), adenine sulphate ($2.8\;{\mu}M$), 5% coconut water and 3% sucrose which promoted the maximum number of shoots as well as beneficial shoot length. Subculturing of shoot tip segments on a similar medium enabled continuous production of more than 100 healthy shoots with similar frequency. When the healthy shoot clumps were cultured on MS medium fortified with 6-benzyladenine ($22.2\;{\mu}M$), kinetin ($4.6\;{\mu}M$), adenine sulphate ($2.8\;{\mu}M$), ${\alpha}$-naphthaleneacetic acid ($2.7\;{\mu}M$), ascorbic acid ($30.0\;{\mu}M$) and 5% coconut water, a rapid production of axillary and adventitious buds was developed after 8 wk culture. More than 300 shoots were produced 10 wk after culture. Rooting was highest (100%) on half strength MS medium containing 22.8 mM IAA. Micropropagated plants established in garden soil, farmyard soil and sand (2:1:1) were uniform and identical to the donor plant with respect to growth characteristics. These plants grew normally without showing any traits.

Assessment of genetic diversity of Typha angustifolia in the development of cattail stands

  • Min, So-Jung;Kim, Heung-Tae;Kim, Jae-Geun
    • Journal of Ecology and Environment
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    • v.35 no.1
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    • pp.27-34
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    • 2012
  • Typha angustifolia has ecological characteristics of clonal growth similar to Phragmites australis. The plant spreads byclonal growth and seed dispersal. In this study, for the three stands which have different settlement age at the Baksilji wetland in Korea, genetic diversity was estimated by random amplification of polymorphic DNA analysis to evaluate the change in genetic diversity of T. angustifolia during stand development in the same population. Stand (ST) 1 was the oldest and ST 4 was the youngest. ST 5 was in a small ditch out of the Baksilji. Although the ST 1, ST 2, and ST 3 did not differ significantly in vegetational or physical environment, the genetic diversity estimated according to Nei's gene diversity (h) and the Shannon index (i) increased in the order of ST 1 < ST 2 < ST 3 contrary to formative age. The genetic diversity of ST 4 was much higher than that of the other three stands. ST 4 has similar abiotic environmental conditions with slight T. angustifolia dominance, and seems to be in the early establishment stage. ST 5 differed from the other stands in vegetational and soil environments, which can result in stressful cattail conditions. Even though the ST 5 stand was not younger than the ST 4 stand, ST 5 showed the highest genetic diversity. Our results indicate that after early settlement of the T. angustifolia population, genetic diversity within the species decreased over time and that the decreasing pattern of genetic diversity within T. angustifolia stands is not likely to occur under stressful conditions.

Acacia mangium Willd. - A Fast Growing Tree for Tropical Plantation

  • Hegde, Maheshwar;Palanisamy, K.;Yi, Jae Seon
    • Journal of Forest and Environmental Science
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    • v.29 no.1
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    • pp.1-14
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    • 2013
  • Acacia mangium is an evergreen fast-growing tropical tree, which can grow up to 30 m tall and 50 cm thick, under favorable conditions. It is a low-elevation species associated with rain forest margins and disturbed, well-drained acid soils. It is native to Papua, Western Irian Jaya and the Maluku islands in Indonesia, Papua New Guinea and north-eastern Queensland in Australia. Due to its rapid growth and tolerance of very poor soils, A. mangium was introduced into some Asian, African and western hemisphere countries where it is used as a plantation tree. A. mangium has good quality wood traits, such as a comparatively low proportion of parenchymatous cells and vessels, white and hard wood, and high calorific value. Therefore, it is useful for a variety of purposes, such as furniture, cabinets, turnery, floors, particleboard, plywood, veneer, fence posts, firewood, and charcoal. It is also being used in pulp and paper making because it has good pulp traits, with high yields of pulp, quality of kraft, and produces paper with good optical, physical and surface properties. Because there are significant provenance differences in growth rate, stem straightness, heartwood formation and frequency of multiple leaders, the productivity and quality also varies depending upon environmental conditions, so genetic improvement programmes have been undertaken in countries like Australia, India, Indonesia, Malaysia, the Philippines, Taiwan and Thailand. The programme includes provenance identifications and testing, plus tree selection and clonal multiplication, establishment of seed orchards and hybridization. The phenology, reproductive biology, fruit characteristics, silvicultural practices for cultivation, pest and diseases problems, production of improved planting stock, harvesting, wood properties and utilization have been discussed in this paper.

Flora and Life-form of the Uninhabited Islets, in Jeju-do (제주도 무인도서의 식물상과 생활형)

  • Song, Kuk-Man;Hyun, Hwa-Ja;Kang, Chang-Hun;Kim, Moon-Hong
    • Journal of Environmental Science International
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    • v.18 no.11
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    • pp.1309-1324
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    • 2009
  • This study was survey a flora and life form spectrum of 11 uninhabited islets, in jeju-do. The vascular plants of each uninhabited islets were summarized as Beomseom 159 taxa, Chagwi-do 136 taxa, Daryeo-do 81 taxa, Hyeongje-do 61 taxa, Jigwi-do 39 taxa, Munseom 147 taxa, Ran-do 58 taxa, Saeseom 65 taxa, Seogeondo 60 taxa, Seopseom 183 taxa and Wa-do 46 taxa. Floristic richness was in order analyzed to be Seogeon-do 28.62, Ran-do 19.24, Daryeo-do 18.53, Wa-do 16.42, Munseom 16.14, Hyeongje-do 14.76, Seopseom 13.32, Beomseom 13.24, Chagwi-do 6.15, Saeseom 5.86 and Jigwi-do 2.51. Life form spectrum was surveyed to H-$D_5$-$R_4$-e; hemieryptophyte(H) 26.8%, not production seeds($D_5$) 54.4%, clonal growth by stolons and struck roots($R_4$) 46.9% and erect form(e) 30.3%. According to the life form spectrum hemieryptophyte dominated high portions, which suggests islet in jeju-do has hemieryptophytic climate and similar to middle parts in Korean Peninsular. However, were noticed by that it has more therophytes. As a result, Partially shows the characteristics change from the temperate climate to the warm temperate climate or a semitropical climate by a climatic change.

Persistence of Multidrug-Resistant Acinetobacter baumannii Isolates Harboring blaOXA-23 and bap for 5 Years

  • Sung, Ji Youn;Koo, Sun Hoe;Kim, Semi;Kwon, Gye Cheol
    • Journal of Microbiology and Biotechnology
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    • v.26 no.8
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    • pp.1481-1489
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    • 2016
  • The emergence and dissemination of carbapenemase-producing Acinetobacter baumannii isolates have been reported worldwide, and A. baumannii isolates harboring blaOXA-23 are often resistant to various antimicrobial agents. Antimicrobial resistance can be particularly strong for biofilm-forming A. baumannii isolates. We investigated the genetic basis for carbapenem resistance and biofilm-forming ability of multidrug-resistant (MDR) clinical isolates. Ninety-two MDR A. baumannii isolates were collected from one university hospital located in the Chungcheong area of Korea over a 5-year period. Multiplex PCR and DNA sequencing were performed to characterize carbapenemase and bap genes. Clonal characteristics were analyzed using REP-PCR. In addition, imaging and quantification of biofilms were performed using a crystal violet assay. All 92 MDR A. baumannii isolates involved in our study contained the blaOXA-23 and bap genes. The average absorbance of biomass in Bap-producing strains was much greater than that in non-Bap-producing strains. In our study, only three REP-PCR types were found, and the isolates showing type A or type B were found more than 60 times among unique patients during the 5 years of surveillance. These results suggest that the isolates have persisted and colonized for 5 years, and biofilm formation ability has been responsible for their persistence and colonization.

Characteristics of Transmissible CTX-M- and CMY-Type β-Lactamase-Producing Escherichia coli Isolates Collected from Pig and Chicken Farms in South Korea

  • Shin, Seung Won;Jung, Myunghwan;Won, Ho Geun;Belaynehe, Kuastros Mekonnen;Yoon, In Joong;Yoo, Han Sang
    • Journal of Microbiology and Biotechnology
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    • v.27 no.9
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    • pp.1716-1723
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    • 2017
  • The rapid dissemination of extended-spectrum ${\beta}$-lactamase (ESBL)-producing Escherichia coli has significantly contributed to public health hazard globally. A total of 281 E. coli strains recovered from pigs and chickens between 2009 and 2015 in South Korea were analyzed for ESBL production. ESBL phenotypes were recognized in 14 E. coli isolates; ten and three ESBL-producing isolates carried only $bla_{CTX-M}$ and $bla_{CMY}$ genes, respectively, and one isolate harbored both genes. The predominant CTX-M and CMY types were CTX-M-15 (n = 8) and CMY-2 (n = 3). We also detected ESBL-producing isolates harboring $bla_{CTX-M-65}$, $bla_{CTX-M-14}$, $bla_{CMY-6}$, $bla_{DHA-1}$, and $bla_{TEM-1}$ genes. All ESBL-producing isolates showed resistance to the extent of the fourth generation cephalosporins, along with multidrug resistance. CTX-M-15-producing isolates showed higher MIC values than CTX-M-14- and CTX-M-65-producing isolates. The $bla_{CTX-M}$ and $bla_{CMY}$ genes have the potential to be transferable. The spreading of $bla_{CMY}$ and $bla_{CTX-M}$ genes was arbitrated mainly via Frep and IncI1 plasmids. Our isolates showed clonal diversity in PFGE analysis. This is the first report of E. coli isolates carrying $bla_{CMY-6}$ in chicken from South Korea. The emergence of CMY-6 ESBLs in a population of poultry suggests that extensive screening with long-term surveillance is necessary to prevent the dissemination of ESBL from chicken to human.

Characteristics of Vascular Plants in Yongyangbo Wetlands

  • Cho, Kwang-Jin;Paik, Weon-Ki;Lee, Jeonga;Lim, Jeongcheol;Lee, Changsu;Chu, Yeounsu
    • Proceedings of the National Institute of Ecology of the Republic of Korea
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    • v.2 no.3
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    • pp.153-165
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    • 2021
  • The objective of this study was to provide basic data for the conservation of wetland ecosystems in the Civilian Control Zone and the management of Yongyangbo wetlands in South Korea. Yongyangbo wetlands have been designated as protected areas. A field survey was conducted across five sessions between April 2019 and August of 2019. A total of 248 taxa were identified during the survey, including 72 families, 163 genera, 230 species, 4 subspecies, and 14 varieties. Their life-forms were Th (therophytes) - R5 (non-clonal form) - D4 (clitochores) - e (erect form), with a disturbance index of 33.8%. Three taxa of rare plants were detected: Silene capitata Kom. and Polygonatum stenophyllum Maxim. known to be endangered species, and Aristolochia contorta Bunge, a least-concern species. S. capitata is a legally protected species designated as a Class II endangered species in South Korea. A total of 26 taxa of naturalized plants were observed, with a naturalization index of 10.5%. There was one endemic plant taxon (Salix koriyanagi Kimura ex Goerz). In terms of floristic target species, there was one taxon in class V, one taxon in Class IV, three taxa in Class III, five taxa in Class II, and seven taxa in Class I. Three invasive alien species (Ambrosia trifida L., Ambrosia artemisiifolia L., and Humulus japonicus Siebold & Zucc) were observed. For continuous conservation of Yongyangbo Wetlands, it is necessary to remove invasive alien plants and block the inflow of non-point pollutants.

Factors Affecting the Vineyard Populational Diversity of Plasmopara viticola

  • Boso, Susana;Gago, Pilar;Santiago, Jose-Luis;de la Fuente, Maria;Martinez, Maria-Carmen
    • The Plant Pathology Journal
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    • v.35 no.2
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    • pp.125-136
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    • 2019
  • Vitis vinifera is very susceptible to downy mildew (Plasmopara viticola). A number of authors have suggested different genetic populations of this fungus exist in Europe, each showing a different degree of virulence. Work performed to date indicates this diversity to be the result of different factors. In areas where gene flow is greater and recombination more frequent, the diversity of P. viticola appears to be wider. In vineyards isolated by geographic barriers, a race may become dominant and produce clonal epidemics driven by asexual reproduction. The aim of the present work was to identify the conditions that influence the genetic diversity of P. viticola populations in the vineyards of northwestern Spain, where the climatic conditions for the growth of this fungus are very good. Vineyards situated in a closed, narrow valley of the interior, in more open valleys, and on the coast were sampled and the populations of P. viticola detected were differentiated at the molecular level through the examination of microsatellite markers. The populations of P. viticola represented in primary and secondary infections were investigated in the same way. The concentration of airborne sporangia in the vegetative cycle was also examined, as was the virulence of the different P. viticola populations detected. The epidemiological characteristics of the fungus differed depending on the degree of isolation of the vineyard, the airborne spore concentration, and on whether the attack was primary or secondary. Strong isolation was associated with the appearance of dominant fungal races and, therefore, reduced populational diversity.