• Title/Summary/Keyword: Clinical coding

검색결과 142건 처리시간 0.033초

임상검체로부터 분리한 플라스미드 매개성 SHV-11 β-lactamase 유전자의 특성 (Characterization of Plasmid-Mediated SHV-11 β-lactamase Gene of Klebsiella pneumoniae Isolated from the Clinical Specimens)

  • 김윤태;이상후;장지현;김태운;최석철;백형석;이경률;윤혜령;김영진
    • 생명과학회지
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    • 제19권12호
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    • pp.1718-1723
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    • 2009
  • Chromosomal 인 SHV-11 $\beta$-lactamase가 plasmid를 매개로 다른 균주로 전달 되는 현상은 흔하지 않다. 본 연구에서는 플라스미드성 SHV-11 $\beta$-lactamase를 동시에 가지고 있는 ESBL생성 두 균주를 검출하였다. 따라서 이들 균주에 대한 유전적 특성과 임상적 의의에 대해 알아보고자 하였다. Vitek system과 이중디스크확산법을 이용하여 ESBL생성균주를 검출하였고, PCR과 DNA 염기서열분석을 이용하여 SHV-11 $\beta$-lactamase를 가지고 있는 ESBL생성균주를 확인 하였다. 이들 균주를 교차접합실험과 형질전환실험을 이용하여 유전자전이를 확인하고 액체배지 희석법으로 3세대 cephalosphorin 항생제에 대한 최소억제농도를 측정하였다. 이들 균주의 유전형 분석결과는 SHV-11 $\beta$-lactamase 유전자와 CTX-M-15 ESBL 유전자를 동시에 가지고 있었다. 3세대 cephalosphorin 항생제에 대한 최소억제농도는 SHV-11 $\beta$-lactamase와 CTX-M-15 ESBL 유전자를 동시에 가지고 있는 균주에서 $64{\mu}g/ml$ 이상이었고, SHV-11 $\beta$-lactamase 만을 가지고 재조합 한 균주에서 $0.5{\mu}g/ml$ 이하로 나타났다.

Electrophysiological characteristics of R47W and A298T mutations in CLC-1 of myotonia congenita patients and evaluation of clinical features

  • Chin, Hyung Jin;Kim, Chan Hyeong;Ha, Kotdaji;Shin, Jin Hong;Kim, Dae-Seong;So, Insuk
    • The Korean Journal of Physiology and Pharmacology
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    • 제21권4호
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    • pp.439-447
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    • 2017
  • Myotonia congenita (MC) is a genetic disease that displays impaired relaxation of skeletal muscle and muscle hypertrophy. This disease is mainly caused by mutations of CLCN1 that encodes human skeletal muscle chloride channel (CLC-1). CLC-1 is a voltage gated chloride channel that activates upon depolarizing potentials and play a major role in stabilization of resting membrane potentials in skeletal muscle. In this study, we report 4 unrelated Korean patients diagnosed with myotonia congenita and their clinical features. Sequence analysis of all coding regions of the patients was performed and mutation, R47W and A298T, was commonly identified. The patients commonly displayed transient muscle weakness and only one patient was diagnosed with autosomal dominant type of myotonia congenita. To investigate the pathological role of the mutation, electrophysiological analysis was also performed in HEK 293 cells transiently expressing homo-or heterodimeric mutant channels. The mutant channels displayed reduced chloride current density and altered channel gating. However, the effect of A298T on channel gating was reduced with the presence of R47W in the same allele. This analysis suggests that impaired CLC-1 channel function can cause myotonia congenita and that R47W has a protective effect on A298T in relation to channel gating. Our results provide clinical features of Korean myotonia congenita patients who have the heterozygous mutation and reveal underlying pathophyological consequences of the mutants by taking electrophysiological approach.

흉부외과환자 임상정보의 전산화 방법에 대한 고찰;데이터베이스 파일(DBF) 구조의 표준화및 코딩화 방안에 대하여 (The Evaluation of Method for Computerization of Clinical Informations of the Patients of the Department of Thoracic and Cardiovascular Surgery - About the practical method of coding and standardization of the structure of the database file(DBF) -)

  • 송우철;김병주;홍기우
    • Journal of Chest Surgery
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    • 제25권10호
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    • pp.989-1000
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    • 1992
  • The concepts of modern type computer are so called "General purpose, stored program and digital computer" that is proposed by Charles Babbage. ENIAC, the initial operational electronic digital computer model, was produced in 1946. During the last 50 years, an epoch-making development of the personal computer was marked. The computerization of all levels of society is going on and also computerization of the general hospital and medical college is developing. But patient data management system for clinician is not used generally. We suggest the use of computer aided data management application programs for the clinical informations of the patients of the Department of Thoracic and Cardiovascular Surgery for better management and to make best of medical informations, to co-operate with the current of this times, and to prepare against the Hospital Information Systems[HIS], actively. Also, we suggest to standardize the format and structure of database files to store the clinical data of the patients By standardization of the database files, we can integrate and relate the data of the individual department or hospital, build up the regional or national statistics of the patients easily, and promote the generation of application programs. The medical network by the communication and computer would be utilized to collect the database files. And finally, we suggest the use of code system to input and search the informations about the diagnosis and operation such as the code system of International Classfication of Disease[WHO] and the table of the classfication of operation of the Ministry of Health and Social Affairs, Korea. In this article, we tried to show the new standards, the essential items for computerization of clinical informations of the patients of the Department of Thoracic and Cardiovascular Surgery.r Surgery.

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Expression and Purification of a Functional Recombinant Aspartate Aminotransferase (AST) from Escherichia coli

  • Zou, Lihui;Zhao, Haijian;Wang, Daguang;Wang, Meng;Zhang, Chuanbao;Xiao, Fei
    • Journal of Microbiology and Biotechnology
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    • 제24권7호
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    • pp.998-1003
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    • 2014
  • Aspartate aminotransferase (AST; E.C. 2.6.1.1), a vitamin B6-dependent enzyme, preferentially promotes the mutual transformation of aspartate and ${\alpha}$-ketoglutarate to oxaloacetate and glutamate. It plays a key role in amino acid metabolism and has been widely recommended as a biomarker of liver and heart damage. Our study aimed to evaluate the extensive preparation of AST and its application in quality control in clinical laboratories. We describe a scheme to express and purify the 6His-AST fusion protein. An optimized sequence coding AST was synthesized and transformed into Escherichia coli BL21 (DE3) strain for protein expression. Ideally, the fusion protein has a volumetric productivity achieving 900 mg/l cultures. After affinity chromatography, the enzyme activity of purified AST reached 150,000 U/L. Commutability assessment between the engineered AST and standard AST from Roche suggested that the engineered AST was the better candidate for the reference material. Moreover, the AST showed high stability during long-term storage at $-20^{\circ}C$. In conclusion, the highly soluble 6His-tagged AST can become a convenient tool for supplying a much better and cheaper standard or reference material for the clinical laboratory.

숫자표기에 의한 포도당 비발효균의 동정시안(MCRCODE-N) (A Numerical Coding System (MCRCODE-N) for Identification of Glucose Nonfermenting Gram-Negative Bacilli)

  • 홍석일;김정숙
    • Journal of Yeungnam Medical Science
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    • 제2권1호
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    • pp.183-190
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    • 1985
  • 본 시안(MCRCODE-N)은 말 그대로 시안인 바 많은 수정과 첨가가 필요할 것이라고 생각되나 국내 실정에 맞는 검사법이라고 생각된다. 본 시안을 이용하여 결정을 보완하는 일이 시급한 바 동학 선후배의 지도 편달을 바라는 바 이다.

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한의표준임상진료지침 개발을 위한 수족냉증에 대한 한의사의 인식과 치료현황 (A Survey on Korean Medicine Doctors' Recognition and Treatment for Developing Korean Medicine Clinical Practice Guideline of Coldness of Hands and Feet)

  • 이동녕;김형준;유준상
    • 대한한방부인과학회지
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    • 제30권3호
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    • pp.92-116
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    • 2017
  • Objectives: The purpose of this study were to researched a Korean medicine doctors' recognition about coldness of hands and feet, and developing of korean medicine clinical practice guidelines (CPG) for coldness of hands and feet. Methods: We conducted a questionnaire survey targeting 399 Korean medicine doctors belonging to the Association of Korean Medicine by e-mail and analyzed the answers. Results: 1. 86.86% of the respondents agreed about the necessity of CPG for coldness of hands and feet. 2. 84.2% of respondents wanted coding of Korean Standard Classification of Diseases (KCD) on coldness of hands and feet. 3. To diagnosis a coldness of hands and feet, the respondents used a Subjective symptoms (98.5%), Infrared thermographic imaging device (DITI) (26.32%) Heart rate variablity test (HRV) (17.04%), Thermometer (9.77%), Cold stress test (2.76%) 4. Causing of coldness of hands and feet, the respondents considered a constitution or heredity (84.71%), stress (73.66%), lack of exercise (64.91%), irregular eating habits (51.63%), Cold meals (32.83%), depression (31.33%), etc. 5. Treating coldness of hands and feet, the respondents used a herbal medicine (66.85%), acupuncture (70.7%) Pharmacopuncture (23.85%) and moxibustion (60.08%) for $10.91{\pm}8.03week$. Conclusions: We researched a Korean Medicine doctors' recognition of CPG, clinical diagnosis, treatment on a coldness of hands and feet, and policy they required.

Paired analysis of tumor mutation burden calculated by targeted deep sequencing panel and whole exome sequencing in non-small cell lung cancer

  • Park, Sehhoon;Lee, Chung;Ku, Bo Mi;Kim, Minjae;Park, Woong-Yang;Kim, Nayoung K.D.;Ahn, Myung-Ju
    • BMB Reports
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    • 제54권7호
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    • pp.386-391
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    • 2021
  • Owing to rapid advancements in NGS (next generation sequencing), genomic alteration is now considered an essential predictive biomarkers that impact the treatment decision in many cases of cancer. Among the various predictive biomarkers, tumor mutation burden (TMB) was identified by NGS and was considered to be useful in predicting a clinical response in cancer cases treated by immunotherapy. In this study, we directly compared the lab-developed-test (LDT) results by target sequencing panel, K-MASTER panel v3.0 and whole-exome sequencing (WES) to evaluate the concordance of TMB. As an initial step, the reference materials (n = 3) with known TMB status were used as an exploratory test. To validate and evaluate TMB, we used one hundred samples that were acquired from surgically resected tissues of non-small cell lung cancer (NSCLC) patients. The TMB of each sample was tested by using both LDT and WES methods, which extracted the DNA from samples at the same time. In addition, we evaluated the impact of capture region, which might lead to different values of TMB; the evaluation of capture region was based on the size of NGS and target sequencing panels. In this pilot study, TMB was evaluated by LDT and WES by using duplicated reference samples; the results of TMB showed high concordance rate (R2 = 0.887). This was also reflected in clinical samples (n = 100), which showed R2 of 0.71. The difference between the coding sequence ratio (3.49%) and the ratio of mutations (4.8%) indicated that the LDT panel identified a relatively higher number of mutations. It was feasible to calculate TMB with LDT panel, which can be useful in clinical practice. Furthermore, a customized approach must be developed for calculating TMB, which differs according to cancer types and specific clinical settings.

Cloning, Expression, and Purification of Recombinant Uricase Enzyme from Pseudomonas aeruginosa Ps43 Using Escherichia coli

  • Shaaban, Mona I.;Abdelmegeed, Eman;Ali, Youssif M.
    • Journal of Microbiology and Biotechnology
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    • 제25권6호
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    • pp.887-892
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    • 2015
  • Uricase is an important microbial enzyme that can be used in the clinical treatment of gout, hyperuricemia, and tumor lysis syndrome. A total of 127 clinical isolates of Pseudomonas aeruginosa were tested for uricase production. A Pseudomonas strain named Ps43 showed the highest level of native uricase enzyme expression. The open reading frame of the uricase enzyme was amplified from Ps43 and cloned into the expression vector pRSET-B. Uricase was expressed using E. coli BL21 (DE3). The ORF was sequenced and assigned GenBank Accession No. KJ718888. The nucleotide sequence analysis was identical to the coding sequence of uricase gene puuDof P. aeruginosa PAO1. We report the successful expression of P. aeruginosa uricase in Escherichia coli. E. coli showed an induced protein with a molecular mass of about 58 kDa that was confirmed by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and Western blotting. We also established efficient protein purification using the Ni-Sepharose column with activity of the purified enzyme of 2.16 IU and a 2-fold increase in the specific activity of the pure enzyme compared with the crude enzyme.

대한한방내과학회지에 투고된 논문들의 경향성 (The Trend of Submitted Manuscripts to the Journal of Korean Oriental Internal Medicine)

  • 고성규
    • 대한한방내과학회지
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    • 제23권1호
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    • pp.65-71
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    • 2002
  • Objective : We analyzed the published and contributed manuscripts of the journal of Oriental Internal Medicine in 2001. Methods : We analysed 120 manuscripts contributed to the editorial board of Journal of Oriental Internal Medicine from January to December 2001. Each manuscript was reviewed by three judges, was reviewed by two editors of the board and who took notes on the coding sheet. The variables of surveying were yes or no of acceptance, total scores, score of each 9 item, the number of writers and institutes, and languages. Statistical methods were used such as descriptive analysis, independent samples t test, ANOVA, multiple composition, multivariate logistic regression analysis. Results : THe odds ratio in vivo, in vitro study for clinical study were 5.15(95% CI 1.93-13.71), and case series or case-control study for case report were 3.78(95% CI, 1.28-11.19) Conclusions : Although in vivo, the in vitro study had more possibility of acceptance to publish than the clinical study, we should identify that these results are assuming high inter-reviewer reliability.

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의료 영상 판독 결과의 DICOM SR 변환 (Conversion of Radiology Report into DICOM SR)

  • 김용수;신승용
    • 한국컴퓨터정보학회논문지
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    • 제10권3호
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    • pp.331-337
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    • 2005
  • DICOM(Digital Imaging and Communications on Medicine) 표준은 2004년 4월에 발표된 "Supplement 23:DICOM SR(Structured Reporting)"을 통해 모든 임상정보의 표준화된 교환이 가능하도록 확장함으로써 의사의 판독보고서와 신체의 특정 부위와의 관계를 체계적으로 연결할 수 있게 되었다. DICOM SR은 정보를 정확하게 표현하기 위해 코드체계를 사용하며, 구성 항목들의 계층적인 트리로써 구조화된 정보를 표현할 수 있다. 본 논문에서는 병원정보시스템의 영상 판독결과 보고서를 분석하여 발견(finding), 결론(conclusion) 및 권고(recommendation)로 세분화하고 구조화한 후 실제로 의사가 진료에 활용할 수 있도록 DICOM SR 시스템을 구현하였다. X-ray와 같은 영상 데이터는 판독결과나 환자의 정보와 같은 텍스트 데이터와 별도로 관리되고 있다. DICOM SR로 표현된 판독결과 보고서는 영상에 대한 참조가 가능하므로 텍스트와 영상이 통합된 정보를 제공할 수 있다.

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